CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42494	Canola	cytosol, plasma membrane	44.72	97.86
CDX71747	Canola	cytosol	69.42	84.06
CDY48929	Canola	cytosol	82.05	76.47
AT3G61300.1	Thale cress	cytosol	77.37	73.15
CDX71748	Canola	cytosol	12.4	62.98
Bra014445.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	98.8	62.66
CDX81020	Canola	cytosol	24.27	55.89
KRH65054	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	14.91	55.24
CDX98254	Canola	cytosol	45.59	54.13
CDY69710	Canola	cytosol	45.81	54.04
CDX67712	Canola	cytosol	45.38	53.88
CDX78498	Canola	cytosol	44.72	53.45
CDX70485	Canola	cytosol	44.61	53.32
CDX97214	Canola	cytosol	44.5	53.19
CDY68091	Canola	cytosol	44.4	53.06
GSMUA_Achr1P00330_001	Banana	cytosol	25.79	52.32
VIT_15s0046g03030.t01	Wine grape	cytosol	57.78	52.16
GSMUA_AchrUn_...	Banana	cytosol	32.97	51.62
CDY47660	Canola	endoplasmic reticulum	46.14	51.21
PGSC0003DMT400000108	Potato	cytosol	56.15	51.14
Solyc01g094410.2.1	Tomato	nucleus	56.04	51.04
CDY70344	Canola	cytosol	27.53	50.2
CDX98964	Canola	endoplasmic reticulum, extracellular	7.62	49.65
CDX86768	Canola	cytosol	54.19	49.31
CDY54062	Canola	cytosol	53.1	49.05
CDY01973	Canola	cytosol	52.77	48.94
CDX80994	Canola	cytosol	5.44	48.54
CDX74344	Canola	cytosol	51.36	48.51
KRH40482	Soybean	cytosol	53.32	48.23
Zm00001d006371_P001	Maize	cytosol	52.88	48.02
KRH00708	Soybean	cytosol	52.99	47.89
Os07t0483500-01	Rice	cytosol	52.67	47.87
EER99386	Sorghum	cytosol	52.34	47.81
KRH65087	Soybean	endoplasmic reticulum, mitochondrion, nucleus	52.12	47.76
KRH48167	Soybean	endoplasmic reticulum, nucleus	52.01	47.7
CDX91899	Canola	cytosol	50.71	47.65
Zm00001d021494_P001	Maize	cytosol	51.9	46.58
TraesCS2D01G234800.1	Wheat	cytosol	51.69	45.85
TraesCS2B01G261000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	51.9	45.78
HORVU4Hr1G079830.2	Barley	plasma membrane	51.8	45.38
CDY13087	Canola	cytosol	22.52	45.2
TraesCS2A01G238900.1	Wheat	cytosol	51.8	44.82
CDY04800	Canola	cytosol	48.64	44.39
CDY21373	Canola	cytosol	48.97	44.38
CDY49185	Canola	cytosol	16.21	44.35
CDY10076	Canola	cytosol, nucleus, plasma membrane	46.46	43.79
CDY32530	Canola	cytosol	47.01	43.68
CDY57334	Canola	cytosol	20.67	42.99
CDX81021	Canola	cytosol	13.38	42.86
CDX86328	Canola	cytosol	47.23	42.59
CDY13273	Canola	cytosol	20.02	39.83
GSMUA_Achr3P03790_001	Banana	cytosol	5.55	38.93
CDX85853	Canola	cytosol	43.74	38.51
CDX68168	Canola	cytosol	43.63	38.37
CDY21171	Canola	cytosol	41.24	37.27
CDY29951	Canola	cytosol	41.35	37.22
CDY35343	Canola	golgi	11.1	36.43
CDY38472	Canola	cytosol	39.39	36.09
CDY25472	Canola	cytosol	39.28	36.06
CDX80993	Canola	extracellular	3.48	35.96
CDY35342	Canola	cytosol, peroxisome, plasma membrane	18.93	35.8
CDX77002	Canola	cytosol, peroxisome, plasma membrane	22.52	34.97
CDX71710	Canola	cytosol	27.42	33.03
CDY11377	Canola	cytosol	27.64	31.59
CDY33906	Canola	nucleus	8.05	30.71

Protein Annotations

EnsemblPlants:CDX89108	EnsemblPlantsGene:GSBRNA2T00149244001	Gene3D:2.60.40.150	GO:A0A078DPJ1	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	InterPro:PRibTrfase_C	PANTHER:PTHR10024	PANTHER:PTHR10024:SF219	PFAM:PF00168
PFAM:PF08372	PFscan:PS50004	ProteinID:CDX89108	ProteinID:CDX89108.1	SEG:seg	SMART:SM00239
SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI0004EEE4B1	MapMan:35.1	:	:

Description

BnaA04g00780D

Coordinates

chrLK031857:+:1089852..1092890

Molecular Weight (calculated)

104600.0 Da

IEP (calculated)

9.476

GRAVY (calculated)

-0.252

Length

919 amino acids

Sequence
(BLAST)

001: MSNLKLGVEV ISARLGDGVN SFVELRFDDQ KVKTTTKLDD SSPVWNERFS FNISDTEDLS NLVLEAYVYN KTSNVTTSCL GKIRILGTAF VPYSEAVGLH
101: YPLEKEKWSV FSFGSTVRGE LTLKVFVTDN PSKTKPRLRK TQEPPQPQTL SPQPPQPQTL FSQPQTLSPA PFQPVKYGSP VLGGGVRART TITAHDLVEP
201: MEYLFVKIVK ARNLPTMDPT GSLDPYVEVK LGNFTATTTQ FEKNKNPVWN EVFAFTKSDQ QANFVDVIVM DKAVMKDKFV GSIRFDLNEI PTRVATDSPI
301: APQWYIVNHE RGGEVMLSVW FGTQADEAFS DATYSDALNA VNKSSVYSKV YHSPRLWYLR VNVIEAQDLV IKPDRTRFPP NPYVNIKLGS QMVRTKPGQS
401: LNPKWNEEFT FVAAEPFEDL EISIQDREET LGTAKIRFDE IETRVDDNRI VPNRWFSLAL ERQTRVRFAT TRILLNVCLE GGYHVLDEST YNSSDFRPSM
501: KEVRNRHEQS VGVLELGILG AEGLSLSRDG KKETVDAYCV AKYGTKWVRT RTVMNSLNPR FNEQYTWEVY EPATVITIGV FDNNGTNGGN IKDGKIGKVR
601: VRISTLESGR LYTNSHPLLV LRPSGVKNMG ELHLAIRFTC TSMFQMLLHY WKPLLPKMHY VRPLKVVQQE ILREHAVNLV AARLSRAEPP LRKEVIEYIT
701: DLNSHFWSIR KSRANLYRLR SVFSGLLGTG EWFQDICTWK KPVASTAVHV LYLAFVCLPE MILPIISLWL FMLGVWNYRL RPRQPQHMDT SLSFADNVHP
801: EELTEEFDTF PFSSQDPGVV KMRYERLRSI AGRAQTLVGD IAGQGERVQA LLSWRDPRAT SIFMVVCLVS SVILYVVPFK VFVLLAGLYI MRHPRLRRKT
901: PPGLVNFFKR LPAKTDCML

Best Arabidopsis Sequence Match ( AT3G61300.1 )
(BLAST)

001: MMSNLKLGVE VISARLKPRE DYGGVNAYVE LRFDDQKVIT MTKIDDSSPV WNEKFFFNIS DTEDLSNQFL DAYVYNKTSS ITKSCLGKIR ILGTAFLPYS
101: EAVGLPYPLE KEKWSMFSSA AANGGELALK VFLTDNPSPK VPNLISTKKI PSKSRHKFHN IPTNESNHSP RGNQQSFQPQ PPPPQSQTAL PPPMMESSLY
201: QAPRFGTPIP TTMGFNPNPP DYSIKETKPI LGGGKRARSS DHDLVEPMEF LFIKIVKARN LPSMDLTGSL DPYIEVKLGN YTGKTKHFEK NQNPVWNEVF
301: AFSKSNQQSN VLEVIVMDKD MVKDDFVGLI RFDLNQIPTR VAPDSPLAPE WYRVNNEKGG EIMLAVWFGT QADEAFSDAT YSDALNAVNK SSLRSKVYHS
401: PRLWYLRVNV IEAQDLVIVP DRTRLPNPYV KIRLNNQVVR TKPSHSLNPR WNEEFTLVAA EPFEDLIISI EDRVAPNREE TLGEVHIPIG TIDKRIDDNR
501: TVPNRWFSLK TENQRRVRFA TTRLHLNVCL EGGYHVLDES TYYSSDFRPS MKELLSHKQP SFGVLELGIL RIEGLNLSQE GKKETVDAYC VAKYGTKWVR
601: TRTVTNCLNP RFNEQYTWEV YEPATVITIG VFDNNQINSG NGNKGDGKIG KIRVRISTLE AGRIYSHSYP LLVLRPSGLK KMGELHLAIR FSCSSMFQML
701: MQYWKPLLPK MHYARPLKVV QQEILRQHAV NLVAARLSRA EPPLRKEVVE YISDSNSHLW SMRKSRANLF RLSSVFSGLL GTGEWFQDIC RWKKPVETTA
801: IHIIFLVLVC SPEMILPVMS LCLFMLGVWN YRLRPRQPPH MDTRLSFADN IHPEELNEEF DTFPFSSQDP GIVKMRYERL RSIASRAQTV VGDIAGQGER
901: VQALLSWRDP RATSIFMVLC LVSTVVLYVV PFKVFVLLAG LYIMRPPRFR GKTPPGPINF FRRLPAKTDC ML

Arabidopsis Description

Anthranilate phosphoribosyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M2D4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.