CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67712	Canola	cytosol	98.84	98.84
CDY69710	Canola	cytosol	97.42	96.79
AT3G57880.3	Thale cress	cytosol	96.25	96.38
CDY47660	Canola	endoplasmic reticulum	97.55	91.18
Solyc10g080420.1.1	Tomato	nucleus	63.82	90.98
KRG95352	Soybean	endoplasmic reticulum	90.7	90.58
KRH67030	Soybean	endoplasmic reticulum, mitochondrion, nucleus	90.57	90.45
VIT_08s0007g06170.t01	Wine grape	cytosol	89.28	88.93
PGSC0003DMT400060959	Potato	cytosol	87.73	88.53
KRH32992	Soybean	cytosol	88.37	88.49
PGSC0003DMT400029745	Potato	cytosol	87.98	88.1
PGSC0003DMT400060862	Potato	cytosol	87.86	87.97
Solyc10g078680.1.1	Tomato	cytosol	85.53	87.8
Solyc10g080430.1.1	Tomato	nucleus	87.34	87.34
EER90047	Sorghum	cytosol	83.59	83.48
TraesCS5D01G273300.1	Wheat	cytosol	83.33	83.33
TraesCS5B01G265100.1	Wheat	cytosol	83.2	83.2
TraesCS5A01G265400.1	Wheat	cytosol	83.07	83.07
HORVU5Hr1G073350.1	Barley	cytosol	83.07	83.07
GSMUA_Achr9P12510_001	Banana	cytosol	43.41	82.96
Os05t0370600-01	Rice	plastid	82.95	82.95
Zm00001d046749_P001	Maize	mitochondrion	82.69	82.58
CDY68091	Canola	cytosol	81.91	82.44
CDX97214	Canola	cytosol	81.4	81.92
Zm00001d036801_P001	Maize	plasma membrane	81.91	81.91
CDX78498	Canola	cytosol	80.36	80.88
CDX70485	Canola	cytosol	79.84	80.36
TraesCS5B01G171600.1	Wheat	cytosol	76.87	77.17
HORVU5Hr1G053320.2	Barley	cytosol	76.74	77.04
TraesCS5D01G178600.1	Wheat	cytosol	76.36	76.65
PGSC0003DMT400011904	Potato	cytosol	75.32	75.62
PGSC0003DMT400011903	Potato	cytosol	53.88	73.94
CDX81020	Canola	cytosol	36.95	71.68
TraesCS5A01G174100.1	Wheat	cytosol	70.54	71.56
Solyc02g044030.1.1	Tomato	cytosol, nucleus, unclear	29.59	67.55
CDY70344	Canola	cytosol	42.89	65.87
CDY33906	Canola	nucleus	20.41	65.56
PGSC0003DMT400013490	Potato	cytosol	44.32	63.64
CDX80994	Canola	cytosol	8.01	60.19
CDX98964	Canola	endoplasmic reticulum, extracellular	10.85	59.57
CDY42494	Canola	cytosol, plasma membrane	32.04	59.05
CDX71747	Canola	cytosol	56.98	58.1
CDX81021	Canola	cytosol	20.8	56.1
CDY13087	Canola	cytosol	32.56	55.02
CDY57334	Canola	cytosol	30.1	52.71
CDX86768	Canola	cytosol	68.73	52.67
CDY49185	Canola	cytosol	22.74	52.38
CDY04800	Canola	cytosol	66.93	51.44
CDY21373	Canola	cytosol	66.93	51.08
CDX86328	Canola	cytosol	66.28	50.34
CDY01973	Canola	cytosol	62.02	48.44
CDY54062	Canola	cytosol	61.89	48.14
CDY10076	Canola	cytosol, nucleus, plasma membrane	59.69	47.38
CDX74344	Canola	cytosol	59.17	47.07
CDY32530	Canola	cytosol	59.69	46.71
CDX91899	Canola	cytosol	58.91	46.63
CDX89108	Canola	cytosol	54.13	45.59
CDY48929	Canola	cytosol	57.11	44.83
CDX77002	Canola	cytosol, peroxisome, plasma membrane	31.27	40.88
CDX85853	Canola	cytosol	54.52	40.42
CDX68168	Canola	cytosol	54.26	40.19
CDY35342	Canola	cytosol, peroxisome, plasma membrane	24.81	39.51
CDX80993	Canola	extracellular	4.52	39.33
CDY21171	Canola	cytosol	51.16	38.94
CDY29951	Canola	cytosol	51.29	38.88
CDY38472	Canola	cytosol	48.32	37.29
CDY25472	Canola	cytosol	48.19	37.26
CDX71710	Canola	cytosol	36.69	37.22
CDY35343	Canola	golgi	13.18	36.43
CDY11377	Canola	cytosol	36.95	35.57
CDY13273	Canola	cytosol	18.6	31.17
CDX71748	Canola	cytosol	0.65	2.76

Protein Annotations

EnsemblPlants:CDX98254	EnsemblPlantsGene:GSBRNA2T00105769001	Gene3D:2.60.40.150	GO:A0A078EBT8	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	InterPro:PRibTrfase_C	PANTHER:PTHR10024	PANTHER:PTHR10024:SF243	PFAM:PF00168
PFAM:PF08372	PFscan:PS50004	ProteinID:CDX98254	ProteinID:CDX98254.1	SEG:seg	SMART:SM00239
SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI0004EE97C9	MapMan:35.1	:	:

Description

BnaC06g16150D

Coordinates

chrLK031904:-:46750..49899

Molecular Weight (calculated)

89086.4 Da

IEP (calculated)

9.378

GRAVY (calculated)

-0.251

Length

774 amino acids

Sequence
(BLAST)

001: MMQRPPPEDF SLKETRPHLG GGKVTGDKLT STYDLVEQMQ YLYVRVVKAK ELPGKDLTGS CDPYVEVKLG NYKGTTRHFE KKSNPEWNQV FAFSKDRIQA
101: SFLEATVKDK DVVKDDLIGR VVFDLSEVPK RVPPDSPLAP QWYRLEDRKG EKVKGELMLA VWFGTQADEA FPEAWHSDAA TVSGTDALAN IRSKVYLSPK
201: LWYLRVNVIE AQDLIPTDKG RYPEVYVKAI VGNQVQRTRV SQSRTINPMW NEDLMFVAAE PFEEPLILSV EDRVAPNKDE VLGRCAIPLQ YLDKRFDHRP
301: VNSKWFNLEK HIMVEGEKKE IKFASKIHMR ICLEGGYHVL DESTHYSSDL RPTAKQLWKP NIGVLELGIL NATGLMPMKA KDGRGTTDAY CVAKYGQKWI
401: RTRTIIDSFT PRWNEQYTWE VFDPCTVVTV GVFDNCHLHG GEKNGGGKDS RIGKVRIRLS TLETDRVYTH SYPLLVLHPN GVKKMGEIHL AVRFTCSSLL
501: NMMHMYSLPL LPKMHYIHPL TVGQLDNLRH QATQIVSMRL TRAEPPLRKE VVEYMLDVGS HMWSMRRSKA NFFRIMGVLS GLIAVGKWFE QICNWKNPIT
601: TVLIHLLFII LVLYPELILP TIFLYLFLIG VWYYRWRPRH PPHMDTRLSH ADSAHPDELD EEFDTFPTSR PSDIVRMRYD RLRSIAGRIQ TVVGDLATQG
701: ERLQSLLSWR DPRATALFVL FCLIAAVVLY VTPFQVVALL VGIYVLRHPR FRYRLPSVPL NFFRRLPART DCML

Best Arabidopsis Sequence Match ( AT3G57880.4 )
(BLAST)

001: MQRPPPEDFS LKETRPHLGG GKLSGDKLTS TYDLVEQMQY LYVRVVKAKE LPGKDMTGSC DPYVEVKLGN YKGTTRHFEK KSNPEWNQVF AFSKDRIQAS
101: FLEATVKDKD FVKDDLIGRV VFDLNEVPKR VPPDSPLAPQ WYRLEDRKGD KVKGELMLAV WFGTQADEAF PEAWHSDAAT VSGTDALANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPTDKQR YPEVYVKAIV GNQALRTRVS QSRTINPMWN EDLMFVAAEP FEEPLILSVE DRVAPNKDEV LGRCAIPLQY LDRRFDHKPV
301: NSRWYNLEKH IMVDGEKKET KFASRIHMRI CLEGGYHVLD ESTHYSSDLR PTAKQLWKPN IGVLELGILN ATGLMPMKTK DGRGTTDAYC VAKYGQKWIR
401: TRTIIDSFTP RWNEQYTWEV FDPCTVVTVG VFDNCHLHGG EKIGGAKDSR IGKVRIRLST LETDRVYTHS YPLLVLHPNG VKKMGEIHLA VRFTCSSLLN
501: MMYMYSQPLL PKMHYIHPLT VSQLDNLRHQ ATQIVSMRLT RAEPPLRKEV VEYMLDVGSH MWSMRRSKAN FFRIMGVLSG LIAVGKWFEQ ICNWKNPITT
601: VLIHLLFIIL VLYPELILPT IFLYLFLIGI WYYRWRPRHP PHMDTRLSHA DSAHPDELDE EFDTFPTSRP SDIVRMRYDR LRSIAGRIQT VVGDLATQGE
701: RLQSLLSWRD PRATALFVLF CLIAAVILYV TPFQVVALCI GIYALRHPRF RYKLPSVPLN FFRRLPARTD CML

Arabidopsis Description

Anthranilate phosphoribosyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M2R0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.