Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- extracellular 4
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81021 | Canola | cytosol | 39.33 | 12.2 |
| CDY33906 | Canola | nucleus | 29.21 | 10.79 |
| CDY70344 | Canola | cytosol | 39.33 | 6.94 |
| CDY13087 | Canola | cytosol | 32.58 | 6.33 |
| CDY35343 | Canola | golgi | 19.1 | 6.07 |
| CDY49185 | Canola | cytosol | 21.35 | 5.65 |
| CDX70485 | Canola | cytosol | 39.33 | 4.55 |
| CDX78498 | Canola | cytosol | 39.33 | 4.55 |
| CDX67712 | Canola | cytosol | 39.33 | 4.52 |
| CDX98254 | Canola | cytosol | 39.33 | 4.52 |
| CDY68091 | Canola | cytosol | 38.2 | 4.42 |
| CDX97214 | Canola | cytosol | 38.2 | 4.42 |
| CDY69710 | Canola | cytosol | 38.2 | 4.36 |
| CDX71747 | Canola | cytosol | 37.08 | 4.35 |
| CDY47660 | Canola | endoplasmic reticulum | 38.2 | 4.11 |
| CDY57334 | Canola | cytosol | 17.98 | 3.62 |
| CDY48929 | Canola | cytosol | 39.33 | 3.55 |
| CDX89108 | Canola | cytosol | 35.96 | 3.48 |
| CDY01973 | Canola | cytosol | 38.2 | 3.43 |
| CDY54062 | Canola | cytosol | 38.2 | 3.42 |
| CDX74344 | Canola | cytosol | 37.08 | 3.39 |
| CDX91899 | Canola | cytosol | 37.08 | 3.37 |
| CDY04800 | Canola | cytosol | 37.08 | 3.28 |
| CDX86328 | Canola | cytosol | 37.08 | 3.24 |
| CDX86768 | Canola | cytosol | 35.96 | 3.17 |
| CDY21373 | Canola | cytosol | 35.96 | 3.16 |
| CDY13273 | Canola | cytosol | 15.73 | 3.03 |
| CDX77002 | Canola | cytosol, peroxisome, plasma membrane | 17.98 | 2.7 |
| CDY21171 | Canola | cytosol | 30.34 | 2.65 |
| CDY29951 | Canola | cytosol | 30.34 | 2.64 |
| CDX71710 | Canola | cytosol | 22.47 | 2.62 |
| CDY10076 | Canola | cytosol, nucleus, plasma membrane | 28.09 | 2.56 |
| CDY32530 | Canola | cytosol | 28.09 | 2.53 |
| EES03181 | Sorghum | cytosol | 30.34 | 2.5 |
| HORVU7Hr1G110440.4 | Barley | cytosol, plastid | 30.34 | 2.49 |
| CDX85853 | Canola | cytosol | 29.21 | 2.49 |
| CDX68168 | Canola | cytosol | 29.21 | 2.49 |
| CDY11377 | Canola | cytosol | 22.47 | 2.49 |
| Os01t0587300-00 | Rice | cytosol | 29.21 | 2.41 |
| Zm00001d011239_P001 | Maize | cytosol, mitochondrion, plasma membrane | 29.21 | 2.4 |
| TraesCS7B01G397000.1 | Wheat | cytosol | 29.21 | 2.4 |
| TraesCS7D01G478500.1 | Wheat | cytosol | 29.21 | 2.4 |
| TraesCS7A01G491900.1 | Wheat | cytosol | 28.09 | 2.31 |
| CDY25472 | Canola | cytosol | 24.72 | 2.2 |
| CDY38472 | Canola | cytosol | 24.72 | 2.19 |
| GSMUA_Achr10P... | Banana | mitochondrion | 3.37 | 1.24 |
| CDX98964 | Canola | endoplasmic reticulum, extracellular | 1.12 | 0.71 |
| CDY35342 | Canola | cytosol, peroxisome, plasma membrane | 1.12 | 0.21 |
| CDY42494 | Canola | cytosol, plasma membrane | 0.0 | 0.0 |
| CDX81020 | Canola | cytosol | 0.0 | 0.0 |
| CDX80994 | Canola | cytosol | 0.0 | 0.0 |
| CDX71748 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX80993 | EnsemblPlantsGene:GSBRNA2T00134423001 | ProteinID:CDX80993 | ProteinID:CDX80993.1 | SignalP:SignalP-noTM | UniParc:UPI0004EDFECF |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC03g02470D
Coordinates
chrLK031823:+:1184717..1185292
Molecular Weight (calculated)
10232.5 Da
IEP (calculated)
9.216
GRAVY (calculated)
-0.110
Length
89 amino acids
Sequence
(BLAST)
(BLAST)
1: MRFLLEFLLI VSPLAHQWEK VFKALGLRSM YLQNCSIYLR VNVIGAQDVE PSDRSQPPQA FVKTTELFTP NGTISKILGL GHWKERQET
001: MAAKDGAKSQ EDYKLKDMKP ELGERWPHGG QRGGTGWIGS ERAASTYDLV EQMFYLYVRV VKAKDLPPNP VTSNCDPYVE VKIGNYKGKT KHFEKRTNPE
101: WNQVFAFSKD KVQSSTVEVF VRDKEMVTRD EYIGKVVFDM REVPTRVPPD SPLAPQWYRL EDRRGESKKR GEVMVAVWLG TQADEAFPDA WHSDASSVQG
201: EGVQSVRSKV YVSPKLWYLR VNVIEAQDVE PSDRSQPPQA FVKVQVGNQI LKTKLCPNKT TNPMWNEDLV FVAAEPFEEQ FFLTVENKVT PAKDEVMGRL
301: ISPLSVFEKR LDHRAVHSKW YNLEKFGFGA LEGDKRHELK FSSRIHLRVC LEGGYHVMDE STLYISDVKP TARQLWKSPI GILEVGILSA QGLSPMKTKD
401: GKATTDPYCV AKYGQKWVRT RTIIDSSSPK WNEQYTWEVY DPCTVITLGV FDNCHLGGSE KSNSGAKVDS RIGKVRIRLS TLEADRIYTH SYPLLVLQTK
501: GLKKMGEVQL AVRFTCLSLA HMIYLYGHPL LPKMHYLHPF TVNQLDSLRY QAMSIVAARL SRAEPPLRKE NVEYMLDVDS HMWSMRRSKA NFFRIVSVFA
601: GLIAMSKWLG DVCYWKNPLT TILFHVLFFI LICYPELILP TTFLYMFLIG LWNFRFRPRH PAHMDTKVSW AEAASPDELD EEFDTFPTSK GQDVVKMRYD
701: RLRSVAGRIQ MVVGDIATQG ERFQALLSWR DPRATCLFVI FCLVAAMILY VTPFKIIALA GGMFWMRHPK FRSKMPSAPS NFFRKLPSKA DCML
101: WNQVFAFSKD KVQSSTVEVF VRDKEMVTRD EYIGKVVFDM REVPTRVPPD SPLAPQWYRL EDRRGESKKR GEVMVAVWLG TQADEAFPDA WHSDASSVQG
201: EGVQSVRSKV YVSPKLWYLR VNVIEAQDVE PSDRSQPPQA FVKVQVGNQI LKTKLCPNKT TNPMWNEDLV FVAAEPFEEQ FFLTVENKVT PAKDEVMGRL
301: ISPLSVFEKR LDHRAVHSKW YNLEKFGFGA LEGDKRHELK FSSRIHLRVC LEGGYHVMDE STLYISDVKP TARQLWKSPI GILEVGILSA QGLSPMKTKD
401: GKATTDPYCV AKYGQKWVRT RTIIDSSSPK WNEQYTWEVY DPCTVITLGV FDNCHLGGSE KSNSGAKVDS RIGKVRIRLS TLEADRIYTH SYPLLVLQTK
501: GLKKMGEVQL AVRFTCLSLA HMIYLYGHPL LPKMHYLHPF TVNQLDSLRY QAMSIVAARL SRAEPPLRKE NVEYMLDVDS HMWSMRRSKA NFFRIVSVFA
601: GLIAMSKWLG DVCYWKNPLT TILFHVLFFI LICYPELILP TTFLYMFLIG LWNFRFRPRH PAHMDTKVSW AEAASPDELD EEFDTFPTSK GQDVVKMRYD
701: RLRSVAGRIQ MVVGDIATQG ERFQALLSWR DPRATCLFVI FCLVAAMILY VTPFKIIALA GGMFWMRHPK FRSKMPSAPS NFFRKLPSKA DCML
Arabidopsis Description
FTIP1FT-interacting protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL59]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.