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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 6
  • vacuole 4
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69710 Canola cytosol 93.0 98.84
CDX67712 Canola cytosol 91.3 97.67
CDX98254 Canola cytosol 91.18 97.55
AT3G57880.3 Thale cress cytosol 89.98 96.38
Solyc10g080420.1.1 Tomato nucleus 59.3 90.42
KRG95352 Soybean endoplasmic reticulum 84.18 89.94
KRH67030 Soybean endoplasmic reticulum, mitochondrion, nucleus 84.06 89.81
VIT_08s0007g06170.t01 Wine grape cytosol 83.33 88.8
KRH32992 Soybean cytosol 82.37 88.23
PGSC0003DMT400029745 Potato cytosol 82.25 88.1
Solyc10g078680.1.1 Tomato cytosol 80.07 87.93
PGSC0003DMT400060959 Potato cytosol 81.4 87.87
PGSC0003DMT400060862 Potato cytosol 81.64 87.45
Solyc10g080430.1.1 Tomato nucleus 81.16 86.82
TraesCS5D01G273300.1 Wheat cytosol 78.26 83.72
TraesCS5B01G265100.1 Wheat cytosol 78.14 83.59
TraesCS5A01G265400.1 Wheat cytosol 78.02 83.46
HORVU5Hr1G073350.1 Barley cytosol 78.02 83.46
EER90047 Sorghum cytosol 78.02 83.35
Os05t0370600-01 Rice plastid 77.78 83.2
GSMUA_Achr9P12510_001 Banana cytosol 40.46 82.72
CDY68091 Canola cytosol 76.81 82.7
CDX97214 Canola cytosol 76.45 82.31
Zm00001d046749_P001 Maize mitochondrion 76.69 81.94
Zm00001d036801_P001 Maize plasma membrane 76.45 81.78
CDX78498 Canola cytosol 75.24 81.01
CDX70485 Canola cytosol 74.76 80.49
HORVU5Hr1G053320.2 Barley cytosol 72.83 78.21
TraesCS5B01G171600.1 Wheat cytosol 72.83 78.21
TraesCS5D01G178600.1 Wheat cytosol 72.46 77.82
PGSC0003DMT400011904 Potato cytosol 69.81 74.97
PGSC0003DMT400011903 Potato cytosol 50.36 73.94
CDX81020 Canola cytosol 34.9 72.43
TraesCS5A01G174100.1 Wheat cytosol 66.67 72.35
CDY33906 Canola nucleus 20.29 69.71
Solyc02g044030.1.1 Tomato cytosol, nucleus, unclear 27.42 66.96
CDY70344 Canola cytosol 40.58 66.67
PGSC0003DMT400013490 Potato cytosol 41.55 63.82
CDX80994 Canola cytosol 7.61 61.16
CDY42494 Canola cytosol, plasma membrane 29.95 59.05
CDX98964 Canola endoplasmic reticulum, extracellular 10.02 58.87
CDX71747 Canola cytosol 53.5 58.37
CDX81021 Canola cytosol 19.57 56.45
CDY13087 Canola cytosol 30.56 55.24
CDX86768 Canola cytosol 64.98 53.27
CDY49185 Canola cytosol 21.5 52.98
CDY57334 Canola cytosol 28.26 52.94
CDY04800 Canola cytosol 62.68 51.54
CDY21373 Canola cytosol 62.8 51.28
CDX86328 Canola cytosol 62.92 51.13
CDY01973 Canola cytosol 59.42 49.65
CDY54062 Canola cytosol 59.42 49.45
CDX74344 Canola cytosol 56.76 48.3
CDX91899 Canola cytosol 56.4 47.75
CDY10076 Canola cytosol, nucleus, plasma membrane 55.68 47.28
CDY32530 Canola cytosol 55.68 46.61
CDX89108 Canola cytosol 51.21 46.14
CDY48929 Canola cytosol 53.99 45.33
CDX77002 Canola cytosol, peroxisome, plasma membrane 29.23 40.88
CDX85853 Canola cytosol 51.21 40.61
CDX68168 Canola cytosol 50.85 40.29
CDY35342 Canola cytosol, peroxisome, plasma membrane 23.07 39.3
CDY21171 Canola cytosol 48.19 39.23
CDY29951 Canola cytosol 48.31 39.18
CDX80993 Canola extracellular 4.11 38.2
CDX71710 Canola cytosol 34.42 37.35
CDY38472 Canola cytosol 45.17 37.29
CDY25472 Canola cytosol 45.05 37.26
CDY35343 Canola golgi 12.44 36.79
CDY11377 Canola cytosol 34.9 35.95
CDY13273 Canola cytosol 17.87 32.03
CDX71748 Canola cytosol 0.97 4.42
Protein Annotations
Gene3D:2.60.40.150MapMan:35.1GO:A0A078I9N6UniProt:A0A078I9N6InterPro:C2_domInterPro:C2_domain_sf
EnsemblPlants:CDY47660ProteinID:CDY47660ProteinID:CDY47660.1GO:GO:0005575GO:GO:0016020GO:GO:0016021
EnsemblPlantsGene:GSBRNA2T00087892001InterPro:IPR000008InterPro:IPR035892PFAM:PF00168PFAM:PF08372InterPro:PRibTrfase_C
PFscan:PS50004PANTHER:PTHR10024PANTHER:PTHR10024:SF243SMART:SM00239SUPFAM:SSF49562TMHMM:TMhelix
UniParc:UPI0004EE981ASEG:seg::::
Description
BnaC04g23970DBnaC04g23970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I9N6]
Coordinates
chrLK032728:+:61900..65190
Molecular Weight (calculated)
95491.1 Da
IEP (calculated)
9.239
GRAVY (calculated)
-0.170
Length
828 amino acids
Sequence
(BLAST)
001: MRDAIFEYFF VIFIYFYFSA FLAFLNSLIL LQWCSCFRSS VLKWSNVFLE ANMMQRPPPE DFSLKETRPH LGGGKITGDK LTSTYDLVEQ MQYLYVRVVK
101: AKELPGKDLT GSCDPYVEVK LGNYKGTTRH FEKKSNPEWN QVFAFSKDRI QASFLEATVK DKDVVKDDLI GRVVFDLNEV PKRVPPDSPL APQWYRLEGT
201: KGEKVRGELM LAVWFGTQAD EAFPEAWHSD AATVSGTDAL ANIRSKVYLS PKLWYLRVNV IEAQDLIPSD KGRYPEVYVK AIVGNQALRT RVSQSRTINP
301: MWNEDLMFVA AEPFEEPLIL SVEDRVAPNK DEVLGRCAIP LQHLDKRFDH RPVNSRWFNL EKHIMVDGEK KEIKFASRIH MRICLEGGYH VLDESTHYSS
401: DLRPTAKQLW KPNIGVLELG ILNATGLMPM KNKDGRGTTD AYCVAKYGQK WIRTRTIIDS FTPRWNEQYT WEVFDPCTVI TVGVFDNCHL HGGGEKNGGG
501: GKDSRIGKVR IRLSTLETDR VYTHSYPLLV LHPNGVKKMG EIHLAVRFTC SSLLNMMYMY SVPLLPKMHY IHPLTVSQLD NLRHQATQIV SMRLTRAEPP
601: LRKEVVEYML DVGSHMWSMR RSKANFFRIM GVLSGLIAVG KWFEQICNWK NPITTVLIHL LFIILVVYPE LILPTVFLYL FLIGVWYYRW RPRHPPHMDT
701: RLSHADSAHP DELDEEFDTF PTSRPSDIVR MRYDRLRSIA GRIQTVVGDL ATQGERLQSL LSWRDPRATA LFVLFCLIAA VVLYVTPFQV VALLVGIYVL
801: RHPRFRYRLP SVPLNFFRRL PARTDCML
Best Arabidopsis Sequence Match ( AT3G57880.4 )
(BLAST)
001: MQRPPPEDFS LKETRPHLGG GKLSGDKLTS TYDLVEQMQY LYVRVVKAKE LPGKDMTGSC DPYVEVKLGN YKGTTRHFEK KSNPEWNQVF AFSKDRIQAS
101: FLEATVKDKD FVKDDLIGRV VFDLNEVPKR VPPDSPLAPQ WYRLEDRKGD KVKGELMLAV WFGTQADEAF PEAWHSDAAT VSGTDALANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPTDKQR YPEVYVKAIV GNQALRTRVS QSRTINPMWN EDLMFVAAEP FEEPLILSVE DRVAPNKDEV LGRCAIPLQY LDRRFDHKPV
301: NSRWYNLEKH IMVDGEKKET KFASRIHMRI CLEGGYHVLD ESTHYSSDLR PTAKQLWKPN IGVLELGILN ATGLMPMKTK DGRGTTDAYC VAKYGQKWIR
401: TRTIIDSFTP RWNEQYTWEV FDPCTVVTVG VFDNCHLHGG EKIGGAKDSR IGKVRIRLST LETDRVYTHS YPLLVLHPNG VKKMGEIHLA VRFTCSSLLN
501: MMYMYSQPLL PKMHYIHPLT VSQLDNLRHQ ATQIVSMRLT RAEPPLRKEV VEYMLDVGSH MWSMRRSKAN FFRIMGVLSG LIAVGKWFEQ ICNWKNPITT
601: VLIHLLFIIL VLYPELILPT IFLYLFLIGI WYYRWRPRHP PHMDTRLSHA DSAHPDELDE EFDTFPTSRP SDIVRMRYDR LRSIAGRIQT VVGDLATQGE
701: RLQSLLSWRD PRATALFVLF CLIAAVILYV TPFQVVALCI GIYALRHPRF RYKLPSVPLN FFRRLPARTD CML
Arabidopsis Description
Anthranilate phosphoribosyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M2R0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.