Factsheet for PGSC0003DMT400011904

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400011903	Potato	cytosol	64.46	88.12
PGSC0003DMT400060959	Potato	cytosol	81.06	81.49
PGSC0003DMT400060862	Potato	cytosol	80.29	80.08
PGSC0003DMT400029745	Potato	cytosol	77.82	77.62
KRH67030	Soybean	endoplasmic reticulum, mitochondrion, nucleus	76.26	75.87
AT3G57880.3	Thale cress	cytosol	75.75	75.55
KRG95352	Soybean	endoplasmic reticulum	75.75	75.35
CDX98254	Canola	cytosol	75.62	75.32
CDX67712	Canola	cytosol	75.62	75.32
Bra003302.1-P	Field mustard	cytosol	75.62	75.32
VIT_08s0007g06170.t01	Wine grape	cytosol	75.62	75.03
CDY69710	Canola	cytosol	75.1	74.33
Bra014601.1-P	Field mustard	cytosol	74.97	74.29
KRH32992	Soybean	cytosol	74.45	74.26
Os05t0370600-01	Rice	plastid	73.54	73.26
EER90047	Sorghum	cytosol	73.54	73.16
AT1G51570.1	Thale cress	cytosol	73.54	73.07
TraesCS5B01G265100.1	Wheat	cytosol	72.89	72.61
TraesCS5A01G265400.1	Wheat	cytosol	72.89	72.61
TraesCS5D01G273300.1	Wheat	cytosol	72.76	72.48
HORVU5Hr1G073350.1	Barley	cytosol	72.76	72.48
Zm00001d046749_P001	Maize	mitochondrion	71.98	71.61
Zm00001d036801_P001	Maize	plasma membrane	71.85	71.58
GSMUA_Achr9P12510_001	Banana	cytosol	37.48	71.36
CDY47660	Canola	endoplasmic reticulum	74.97	69.81
HORVU5Hr1G053320.2	Barley	cytosol	67.44	67.44
TraesCS5D01G178600.1	Wheat	cytosol	67.44	67.44
TraesCS5B01G171600.1	Wheat	cytosol	67.44	67.44
Solyc02g044030.1.1	Tomato	cytosol, nucleus, unclear	27.89	63.42
TraesCS5A01G174100.1	Wheat	cytosol	62.13	62.78
PGSC0003DMT400055029	Potato	cytosol	61.22	61.46
PGSC0003DMT400013490	Potato	cytosol	42.15	60.3
PGSC0003DMT400046026	Potato	cytosol	60.31	58.79
PGSC0003DMT400087204	Potato	cytosol	60.44	57.39
PGSC0003DMT400030931	Potato	mitochondrion	10.89	47.73
PGSC0003DMT400000108	Potato	cytosol	62.13	47.47
PGSC0003DMT400014804	Potato	cytosol	61.22	47.15
PGSC0003DMT400065015	Potato	cytosol	64.46	44.57
PGSC0003DMT400089685	Potato	cytosol	58.63	44.05
PGSC0003DMT400023971	Potato	cytosol	58.63	44.05
PGSC0003DMT400025225	Potato	cytosol	57.46	43.86
PGSC0003DMT400065217	Potato	cytosol	50.19	36.96
PGSC0003DMT400054936	Potato	cytosol	45.91	35.15
PGSC0003DMT400088288	Potato	cytosol	45.4	34.72
PGSC0003DMT400045958	Potato	cytosol	44.75	34.67

Protein Annotations

EntrezGene:102604965	Gene3D:2.60.40.150	MapMan:35.1	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR000008	InterPro:IPR035892	UniProt:M1A0D2	PFAM:PF00168
PFAM:PF08372	EnsemblPlantsGene:PGSC0003DMG400004672	PGSC:PGSC0003DMG400004672	EnsemblPlants:PGSC0003DMT400011904	InterPro:PRibTrfase_C	PFscan:PS50004
PANTHER:PTHR10024	PANTHER:PTHR10024:SF243	SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI000295B81D
RefSeq:XP_006349900.1	SEG:seg	:	:	:	:

Description

C2 domain-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400004672]

Coordinates

chr12:-:59442421..59444988

Molecular Weight (calculated)

88906.0 Da

IEP (calculated)

8.206

GRAVY (calculated)

-0.186

Length

771 amino acids

Sequence
(BLAST)

001: MQRPPQEDFS AHLDGGKVTG DMFTRTYDLV EQMQYLYVRV VKAKDLPGKD LDPYVEVRLG NYSGTTRHFV KKTNPEWNQV FAFSMDQIQV SVLEVNVKDK
101: DDSVGRVMFD LNEIPKRVPP DSPLAPQWYR LEDGSGSKVK GELMMAVWMG TQADEAFAES WHSDAATVSG ADSLVNIRSK IYFSPKLWYL RVNVIEAQDL
201: ISADRSRFPE VYVKAILGNQ ELITKVSRSK TINPIWNEDL IFVAAEPFEE PLILSVEDRV APNKDVILGK CLIHLQYIER RLNHRPMYSK WYNLEKHAIV
301: EGEKEKETSF ASRIQMRLYL EGGYHVLDEP IDYSSGDLRP TAKQLQKSSI GVLELGILNA QGLPPMKTKD GRASTDAYCV AKYGHKWVQT RTIIDSLAPK
401: WNEQYTWEVF DPCTVITIGV FDNCHLHGGD KPGGQARDSR IGKVRIRLSA LETDRVYTYS YPLLVLHPTG VKKMGEIHLA VRFNCSSLMN MMHLFSQPLL
501: PKMHHIHPLI VEGNQFEKLI KLDNLRHQAS QMVSMWLSRA EPPLRKEIVE YMLDVKSDMW SMRKIRANFL RIMDVLGGLI AIWKWFDQIC NWKNPITTLV
601: IHVLFLILVL YPELILPTIF LSLSLIVVWN YRYRPRRPPF MDIRLSCADD AHPDELDEEF DTFPTSRPTD IVRIRYERLK SIAGSFQNVV GDMANQGERL
701: HSLLSWRDPR VTKLFVISCL IAVIVLYFMG FRVVILVTGF YVLRHPWFHH NLPSAPLNFF TRLPTRIDSM L

Best Arabidopsis Sequence Match ( AT3G57880.4 )
(BLAST)

001: MQRPPPEDFS LKETRPHLGG GKLSGDKLTS TYDLVEQMQY LYVRVVKAKE LPGKDMTGSC DPYVEVKLGN YKGTTRHFEK KSNPEWNQVF AFSKDRIQAS
101: FLEATVKDKD FVKDDLIGRV VFDLNEVPKR VPPDSPLAPQ WYRLEDRKGD KVKGELMLAV WFGTQADEAF PEAWHSDAAT VSGTDALANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPTDKQR YPEVYVKAIV GNQALRTRVS QSRTINPMWN EDLMFVAAEP FEEPLILSVE DRVAPNKDEV LGRCAIPLQY LDRRFDHKPV
301: NSRWYNLEKH IMVDGEKKET KFASRIHMRI CLEGGYHVLD ESTHYSSDLR PTAKQLWKPN IGVLELGILN ATGLMPMKTK DGRGTTDAYC VAKYGQKWIR
401: TRTIIDSFTP RWNEQYTWEV FDPCTVVTVG VFDNCHLHGG EKIGGAKDSR IGKVRIRLST LETDRVYTHS YPLLVLHPNG VKKMGEIHLA VRFTCSSLLN
501: MMYMYSQPLL PKMHYIHPLT VSQLDNLRHQ ATQIVSMRLT RAEPPLRKEV VEYMLDVGSH MWSMRRSKAN FFRIMGVLSG LIAVGKWFEQ ICNWKNPITT
601: VLIHLLFIIL VLYPELILPT IFLYLFLIGI WYYRWRPRHP PHMDTRLSHA DSAHPDELDE EFDTFPTSRP SDIVRMRYDR LRSIAGRIQT VVGDLATQGE
701: RLQSLLSWRD PRATALFVLF CLIAAVILYV TPFQVVALCI GIYALRHPRF RYKLPSVPLN FFRRLPARTD CML

Arabidopsis Description

Anthranilate phosphoribosyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M2R0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.