Factsheet for PGSC0003DMT400088288

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400045958	Potato	cytosol	94.44	95.68
Solyc01g065500.2.1	Tomato	cytosol	93.45	94.96
CDY25472	Canola	cytosol	63.69	64.14
CDY38472	Canola	cytosol	63.49	63.81
KRH17620	Soybean	cytosol	63.69	63.63
AT5G17980.1	Thale cress	cytosol	64.29	61.77
Bra002118.1-P	Field mustard	cytosol	64.19	61.62
Os07t0165100-01	Rice	cytosol, endoplasmic reticulum, peroxisome	41.77	51.47
TraesCS5D01G484400.1	Wheat	cytosol	51.39	49.9
TraesCS5A01G471900.1	Wheat	cytosol	51.39	49.9
TraesCS5B01G484400.1	Wheat	cytosol	50.69	49.42
PGSC0003DMT400060959	Potato	cytosol	36.9	48.5
PGSC0003DMT400029745	Potato	cytosol	37.1	48.38
PGSC0003DMT400060862	Potato	cytosol	36.9	48.12
Zm00001d018871_P001	Maize	cytosol	50.99	48.04
PGSC0003DMT400065217	Potato	cytosol	49.6	47.76
PGSC0003DMT400046026	Potato	cytosol	37.1	47.28
OQU88487	Sorghum	cytosol	50.6	47.27
PGSC0003DMT400011903	Potato	cytosol	25.6	45.74
PGSC0003DMT400011904	Potato	cytosol	34.72	45.4
PGSC0003DMT400055029	Potato	cytosol	33.83	44.4
PGSC0003DMT400054936	Potato	cytosol	43.55	43.59
PGSC0003DMT400087204	Potato	cytosol	34.82	43.23
PGSC0003DMT400000108	Potato	cytosol	42.36	42.32
PGSC0003DMT400013490	Potato	cytosol	22.62	42.3
PGSC0003DMT400025225	Potato	cytosol	42.36	42.28
PGSC0003DMT400014804	Potato	cytosol	41.57	41.86
GSMUA_Achr9P10500_001	Banana	cytosol	26.19	40.87
PGSC0003DMT400023971	Potato	cytosol	40.18	39.47
PGSC0003DMT400089685	Potato	cytosol	40.18	39.47
PGSC0003DMT400065015	Potato	cytosol	43.65	39.46
PGSC0003DMT400030931	Potato	mitochondrion	6.75	38.64

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR000008	InterPro:IPR035892	UniProt:M1DFM5	PFAM:PF00168	PFAM:PF08372
EnsemblPlantsGene:PGSC0003DMG400037859	PGSC:PGSC0003DMG400037859	EnsemblPlants:PGSC0003DMT400088288	InterPro:PRibTrfase_C	PFscan:PS50004	PANTHER:PTHR10024
PANTHER:PTHR10024:SF271	SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI000295E00F	SEG:seg

Description

C2 domain-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400037859]

Coordinates

chr1:+:24000268..24003371

Molecular Weight (calculated)

113861.0 Da

IEP (calculated)

6.852

GRAVY (calculated)

-0.226

Length

1008 amino acids

Sequence
(BLAST)

0001: MGTVRKLVVE VIEARNLLPK DGHGTSSPYV LVDFHGQRRK TRTVTRDLSP QWNEMLEFNV GKPSDVFGDM LELDVYHDKS IGPTTRNNFL GRIRLSATQF
0101: VKKGEEALIY YHLEKKYWFG WISGEIGLKT YVVEQLVVLQ VKAEPKQAPP AEPTEAAPEG EKPNSIEEEP PAQVVENPTT VEAEPPAKEA ENPTSVLMDP
0201: HPPQEDEFTQ DPPQEDEFTQ LMKRSVSLGS IPEVKVSNNI NIVTGPRPIS RASSVIFSDA GSGPIEPSSF DLVEKMHYLF VRVVKAQSLP TVDCPVVKIV
0301: VSGSHVVSKP ARKTVLFEWD QTFAFGRDAP DSSSLLEVSV WDPSSAKSFD PTSDVAGHVF LGGICFDVSE IPLRDPPDSP LAPQWYRLEG GGAHRGDLML
0401: ATWVGTQADD SFPEAWKTDT AGNPASKSKV YQSPKLWYLR SSVIEAQDIS QLTHNSKESS YHIKAQLGLQ VQKTKSIPTT SIGSPSWNED LVFVAAEPFT
0501: EHCLLFFLIE TDRTAKDQTV LAVASIPLTT IERRVDDRKV ASRWFTFEDP NEERRIYKGR VHLRLCFDGG YHVMDEAAHV CSDYRPTARQ LWKAPIGTVE
0601: LGIIGCKNLL PMKDKGSTDA YAVAKYGNKW VRTRTISDSL EPRWNEQYTW RVYDPSTVLT IGVFDGCSEV VFESDECMRP NFRIGKVRVR ISTLTTGKVY
0701: KNTFPLLLLS QAGLKKMGEI ELAVRFIRAT PTLDFLHVYS QPLLPMMHHV KPLGMVQQDS LRIAAVKIVA SHLTRSEPPL RREVVTYMLD ADSHSFSMRK
0801: VRANWFRIIN VIAGVIDIVK WVDDTRGWKN PTATLLVHAL LVMLLWFPDL IIPTFAFYVF VIGAWNYRFR SRDTLPHFDP KISLAESLDR DELDEEFDGL
0901: PCTRPNELVR ARYDKLRMLG AWVQTILGDF ATQGERVQAL VTWRDPRATG IFIGLCFVVA FILYLVPSKM VSMAFGFYYL RHPIFRDRMP SPALNFFRRL
1001: PSLSDRML

Best Arabidopsis Sequence Match ( AT5G17980.1 )
(BLAST)

0001: MATTRKLVVE VVDAKDLTPK DGHGTSSPYV VLDYYGQRRR TRTIVRDLNP VWNETLEFSL AKRPSHQLFT DVLELDMYHD KNFGQTRRNN FLGRIRLGSD
0101: QFVGQGEEAL IYYPLEKKSL FNLVQGEIGL RVYYADEKPP PLKPTVAPLE TVVEEKTEET KAEGPDESKP PPETNDIPAE VKETVKPPQP PPEESSPAEG
0201: PKPDEEASPP LQENATVGGE EPPASESDKN EAEAKPVEEP PQNQPDGEDI VLESEDTMSW ASAPRSPLPE VIISRSVSGS IPETKNGPQP LRRSVSETAS
0301: YTSEISDVST IERSTFDLVE KMHYVFIRVV KARSLPTSGS PVTKISLSGT MIQSKPARKT SCFEWDQTFA FLRDSPDLSS SPILEISVWD SSTGIETSQF
0401: LGGICFDVSE IPLRDPPDSP LAPQWYRLEG GGAHNSDLML ATWTGTQADE SFPDAWKTDT AGNVTARAKV YMSSKLWYLR ATVIEAQDLL PPQLTAFKEA
0501: SFQLKAQLGS QVQKTKSAVT RNGAPSWNED LLFVAAEPFS DQLVFTLEYR TSKGPVTVGM ARVPLSAIER RVDDRLVASR WLGLEDPNDE KRGNRSRVHI
0601: RLCFDGGYHV MDEAAHVCSD YRPTARQLWK PAVGIVELGI IGCKNLLPMK TVNGKGSTDA YTVAKYGSKW VRTRTVSDSL DPKWNEQYTW KVYDPCTVLT
0701: IGVFDSWGVY EVDGGKEATR QDLRIGKVRI RISTLETGKA YRNTYPLLML VNGGVKKLGE IELAVRFVRT APPLDFLHVY TQPLLPLMHH IKPLSLFQED
0801: MLRNTAVKIL AAHLSRSEPP LRPEIVRYML DADTHTFSMR KVRANWLRIV NVVAGMVDVV RWVDDTRFWK NPTSTLLVHA LVVMLIWFPD LIVPTLAFYL
0901: FVIGAWNYRF RSRAALPHFD PRLSLADAAD RDELDEEFDV VPSNRPPEMV RLRYDKLRNV GARVQTILGE VAAQGEKMQA LVTWRDPRAT GIFVGLCFFV
1001: ALVLYLVPTK MVAMASGFYY FRHPIFRDRK PSPVLNFFRR LPSLSDRLM

Arabidopsis Description

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FJG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.