Factsheet for PGSC0003DMT400065217

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g113190.1.1	Tomato	cytosol	98.76	98.76
VIT_17s0000g05700.t01	Wine grape	cytosol	77.94	80.87
KRH56956	Soybean	mitochondrion	74.5	76.1
CDX85853	Canola	cytosol	72.78	72.99
CDX68168	Canola	cytosol	72.68	72.82
Bra003788.1-P	Field mustard	cytosol	72.78	72.71
AT1G74720.1	Thale cress	cytosol	73.54	71.23
EES03181	Sorghum	cytosol	62.66	60.68
Zm00001d011239_P001	Maize	cytosol, mitochondrion, plasma membrane	62.37	60.24
TraesCS7D01G478500.1	Wheat	cytosol	61.89	59.72
TraesCS7A01G491900.1	Wheat	cytosol	61.8	59.69
Os01t0587300-00	Rice	cytosol	61.41	59.54
TraesCS7B01G397000.1	Wheat	cytosol	61.51	59.35
HORVU7Hr1G110440.4	Barley	cytosol, plastid	60.94	58.91
PGSC0003DMT400060959	Potato	cytosol	39.92	54.5
PGSC0003DMT400060862	Potato	cytosol	40.11	54.33
PGSC0003DMT400029745	Potato	cytosol	39.83	53.95
PGSC0003DMT400046026	Potato	cytosol	38.4	50.82
PGSC0003DMT400045958	Potato	cytosol	47.85	50.35
PGSC0003DMT400011904	Potato	cytosol	36.96	50.19
PGSC0003DMT400013490	Potato	cytosol	25.6	49.72
PGSC0003DMT400088288	Potato	cytosol	47.76	49.6
PGSC0003DMT400011903	Potato	cytosol	26.55	49.29
PGSC0003DMT400054936	Potato	cytosol	46.13	47.96
PGSC0003DMT400055029	Potato	cytosol	35.15	47.92
PGSC0003DMT400087204	Potato	cytosol	35.63	45.94
PGSC0003DMT400000108	Potato	cytosol	44.03	45.69
PGSC0003DMT400014804	Potato	cytosol	43.55	45.55
PGSC0003DMT400089685	Potato	cytosol	42.69	43.57
PGSC0003DMT400023971	Potato	cytosol	42.69	43.57
PGSC0003DMT400025225	Potato	cytosol	41.74	43.27
PGSC0003DMT400065015	Potato	cytosol	45.85	43.05
PGSC0003DMT400030931	Potato	mitochondrion	6.88	40.91

Protein Annotations

EntrezGene:102584166	Gene3D:2.60.40.150	MapMan:35.1	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR000008	InterPro:IPR035892	UniProt:M1CDK7	PFAM:PF00168
PFAM:PF08372	EnsemblPlantsGene:PGSC0003DMG400025348	PGSC:PGSC0003DMG400025348	EnsemblPlants:PGSC0003DMT400065217	InterPro:PRibTrfase_C	PFscan:PS50004
PANTHER:PTHR10024	PANTHER:PTHR10024:SF271	SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI0002959837
RefSeq:XP_006367076.1	SEG:seg	:	:	:	:

Description

Quirky [Source:PGSC_GENE;Acc:PGSC0003DMG400025348]

Coordinates

chr3:+:53053671..53058806

Molecular Weight (calculated)

118875.0 Da

IEP (calculated)

7.203

GRAVY (calculated)

-0.333

Length

1047 amino acids

Sequence
(BLAST)

0001: MNMSSGPPPE QQPQQQEPPS RPPQLVRKLV VEILDARNLL PKDGQGSSSP YVVVDFDGQK KRTSTVCRNL NPEWNEGLEF IISDPRTMEF EELDIEVFND
0101: KKLSNGNARK NHFLGRVKLY GSQFARRGEE GLIYFPLEKK SVFSWIRGEL GLKIYYYDEM VQEEEPPPPQ PEQQQQQPPP QEEMKKTPVY VVMEDPRQRM
0201: LEIPMPTEVA MEAQEQSPPI VTIEESPPPM NMPPEQQQQC SHRHEEGPPM MSGPPMMSVP VPPPEYPPQE VKRMQAGRAG ERVRVMRRPN GDYSPRVISG
0301: KVGGESERIS AFDLVEPMHY LFVKIVKARG LAPSESPFVK IRTSNHFLRS KPAIIRPGEL LSNPEWQQVF SLCHNKQEST NSTLEISVWD SASDHFLGGV
0401: CFDLSDVPVR DPPDSPLAPQ WYHLEGGADD QHKVSGDIQL SVWIGTQADD AFPESCSSDA PYVAHTRSKV YQSPKLWYLR ITVIEAQDLH IAPNLPPLTA
0501: PEVRVKAQLG FQSVRTRRGT MNHHSSVFHW SEDLIFVAGE PLEDSLILLV EDRTTKDPAL LGHIIIPVSS IEQRLDERLV PAKWFGLEGG PGGAYCGRLH
0601: LRMCLEGGYH VLDEAAHVCS DFRPTAKQLW KPAVGILELG ILGARGLLPL KSKGPGKGST DAYCVAKYGK KWVRTRTITD TFDPRWNEQY TWQVYDPCTV
0701: LTIGVFDNWR MFADSGEDKP DYRIGKVRIR VSTLENNKVY TNSYPLLVLL RSGLKKMGEI EVAIRFVCPS LLPETCAVYG QPVLPKMHYL RPLGVAQQEA
0801: LRGAAIKMVA AWLARSEPPL GPEVVRYMLD ADSHTWSMRK SKANWFRIVA VLAWAVGLAK WLDDIRRWRN PVTTILVHVL YLVLVWYPDL IVPTGFLYVF
0901: LIGVWYYRFR PKIPAGMDTR ISQSETVDPD ELDEEFDTIP SSKPPEIIRM RYDRLRILAA RVQTVLGDFA TQGERVQALV SWRDPRATKL FIIVCLIITI
1001: VLYAVPPKMV AVALGFYFLR HPMFRDPMPP ATLNFFRRLP SLSDRLM

Best Arabidopsis Sequence Match ( AT1G74720.1 )
(BLAST)

0001: MNTTPFHSDP PPSRIQRKLV VEVVEARNIL PKDGQGSSSA YVVVDFDAQK KRTSTKFRDL NPIWNEMLDF AVSDPKNMDY DELDIEVYND KRFGNGGGRK
0101: NHFLGRVKIY GSQFSRRGEE GLVYFPLEKK SVFSWIRGEI GLKIYYYDEA ADEDTAGGGG GQQQQQQQQQ FHPPQQEADE QQHQQQFHPP PQQMMNIPPE
0201: KPNVVVVEEG RVFESAQSQR YTETHQQPPV VIVEESPPQH VMQGPNDNHP HRNDNHPQRP PSPPPPPSAG EVHYYPPEVR KMQVGRPPGG DRIRVTKRPP
0301: NGDYSPRVIN SKTGGGETTM EKKTHHPYNL VEPMQYLFVR IVKARGLPPN ESAYVKVRTS NHFVRSKPAV NRPGESVDSP EWNQVFALGH NRSDSAVTGA
0401: TLEISAWDAS SESFLGGVCF DLSEVPVRDP PDSPLAPQWY RLEGSGADQN SGRISGDIQL SVWIGTQVDE AFPEAWSSDA PHVAHTRSKV YQSPKLWYLR
0501: VTVLEAQDLH IAPNLPPLTA PEIRVKAQLG FQSARTRRGS MNNHSGSFHW HEDMIFVAGE PLEDCLVLMV EDRTTKEATL LGHAMIPVSS IEQRIDERFV
0601: PSKWHTLEGE GGGGGGGGGP GGGGGGGPYC GRISLRLCLE GGYHVLEEAA HVCSDFRPTA KQLWKPPIGI LELGILGARG LLPMKAKNGG KGSTDAYCVA
0701: KYGKKWVRTR TITDSFDPRW HEQYTWQVYD PCTVLTVGVF DNWRMFSDAS DDRPDTRIGK IRIRVSTLES NKVYTNSYPL LVLLPSGMKK MGEIEVAVRF
0801: ACPSLLPDVC AAYGQPLLPR MHYIRPLGVA QQDALRGAAT KMVAAWLARA EPPLGPEVVR YMLDADSHAW SMRKSKANWY RIVGVLAWAV GLAKWLDNIR
0901: RWRNPVTTVL VHILYLVLVW YPDLVVPTAF LYVVMIGVWY YRFRPKIPAG MDIRLSQAET VDPDELDEEF DTIPSSRRPE VIRARYDRLR ILAVRVQTIL
1001: GDFAAQGERI QALVSWRDPR ATKLFIAICL VITIVLYAVP AKMVAVALGF YYLRHPMFRD TMPTASLNFF RRLPSLSDRL I

Arabidopsis Description

QKYProtein QUIRKY [Source:UniProtKB/Swiss-Prot;Acc:B8XCH5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.