Factsheet for PGSC0003DMT400045958

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g065500.2.1	Tomato	cytosol	94.87	95.16
PGSC0003DMT400088288	Potato	cytosol	95.68	94.44
CDY25472	Canola	cytosol	64.62	64.24
CDY38472	Canola	cytosol	64.42	63.91
KRH17620	Soybean	cytosol	64.32	63.43
Bra002118.1-P	Field mustard	cytosol	65.03	61.62
AT5G17980.1	Thale cress	cytosol	64.72	61.39
Os07t0165100-01	Rice	cytosol, endoplasmic reticulum, peroxisome	42.41	51.59
TraesCS5D01G484400.1	Wheat	cytosol	52.16	50.0
TraesCS5A01G471900.1	Wheat	cytosol	52.16	50.0
TraesCS5B01G484400.1	Wheat	cytosol	51.46	49.52
Zm00001d018871_P001	Maize	cytosol	51.76	48.13
PGSC0003DMT400065217	Potato	cytosol	50.35	47.85
PGSC0003DMT400060959	Potato	cytosol	36.88	47.85
PGSC0003DMT400029745	Potato	cytosol	37.09	47.74
PGSC0003DMT400060862	Potato	cytosol	36.98	47.61
OQU88487	Sorghum	cytosol	51.46	47.45
PGSC0003DMT400046026	Potato	cytosol	36.78	46.27
PGSC0003DMT400011903	Potato	cytosol	25.53	45.04
PGSC0003DMT400011904	Potato	cytosol	34.67	44.75
PGSC0003DMT400055029	Potato	cytosol	34.07	44.14
PGSC0003DMT400054936	Potato	cytosol	44.12	43.59
PGSC0003DMT400087204	Potato	cytosol	34.97	42.86
PGSC0003DMT400013490	Potato	cytosol	22.91	42.3
PGSC0003DMT400000108	Potato	cytosol	42.61	42.02
PGSC0003DMT400014804	Potato	cytosol	42.21	41.96
PGSC0003DMT400025225	Potato	cytosol	42.31	41.68
GSMUA_Achr9P10500_001	Banana	cytosol	26.83	41.33
PGSC0003DMT400030931	Potato	mitochondrion	7.24	40.91
PGSC0003DMT400023971	Potato	cytosol	40.5	39.28
PGSC0003DMT400089685	Potato	cytosol	40.5	39.28
PGSC0003DMT400065015	Potato	cytosol	43.72	39.01

Protein Annotations

EntrezGene:102604455	Gene3D:2.60.40.150	MapMan:35.1	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR000008	InterPro:IPR035892	UniProt:M1BIF6	PFAM:PF00168
PFAM:PF08372	EnsemblPlantsGene:PGSC0003DMG400017829	PGSC:PGSC0003DMG400017829	EnsemblPlants:PGSC0003DMT400045958	InterPro:PRibTrfase_C	PFscan:PS50004
PANTHER:PTHR10024	PANTHER:PTHR10024:SF271	SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI000296FCBC
RefSeq:XP_006358735.1	SEG:seg	:	:	:	:

Description

C2 domain-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400017829]

Coordinates

chr1:-:41238981..41242238

Molecular Weight (calculated)

112231.0 Da

IEP (calculated)

6.912

GRAVY (calculated)

-0.189

Length

995 amino acids

Sequence
(BLAST)

001: MGIVRKLVVE VIEARNLLPK DGHGTSSPYV FVDFYGQRRK TRTVTRDLSP QWNEMLEFNV GKPSDVFGDM LELDVYHDKS IGPTTRNNFL GRIRLSATQF
101: VKKGEEALIY YPLEKKYWFS WISGEIGLKI YFVEQLLVPK VKAEPKQAPL AEPTEAAPEG EKPNSIEEEP PEQVVENPTT VEAEPPANEA ENPTSVLMDP
201: PQEDEFTQLM KRSVSLGSIP EVKVSNNINI VTGPRPISRA SSVIFSDAGS GPIEPSSFDL VEKMHYLFVR VVKARSLPTV GCPVVKIVVS GSHVVSKPAR
301: KTVLFEWDQT FAFGRDAPDS SSLLEVSVWD PSSAKSFDST SDVAGHVFLG GICFDVSEIP LRDPPDSPLA PQWYRLEGAG AHRGDLMLAT WVGTQADDSF
401: PDAWKTDTAS NPASKSKVYQ SPKLWYLRSS VMEAQDISHL THSKDSSYHI KAQLGFQVQK TKSIPTTSTG SPSWNEDLVF VAAEPFTEHC LLFFLIETDR
501: TAKDQTVLAV ASIPLTTIER RVDDRKVASR WFTFEDPNEE KRIYKGRVHL RLCFDGGYHV MDEAAHVCSD YRPTARQLWK APIGTVELGI IGCKNLLPMK
601: GKGSTDAYAV AKYGNKWVHT RTISDSLEPR WNEQYTWRVY DPSTVLTIGV FDGCSEVVFE SDECMRPDFR IGKVRVRIST LTTGKVYRNT FQLILLSQAG
701: LKKMGEIELA VRFIRSTPTL DFLHVYSQPL LPMMHHVKPL GMVQQASLRS AAVKIVASHL TRSEPPLRRE VVTYMLDADS HSFSMREVRA NWFRIINVIA
801: GVIDIVKWVD DTRGWKNPTA TLLVHALLVM LVWFPDLIIP TFAFYVFVIG AWNYRFSSQD TLPNFDPKIS LAESLDRDEL DEEFDALPCT RPNELVRARY
901: DKLRMLGARV QTILGDFATQ GERVQALVTW HDPRATGIFI GLCFVVAFIL YLVPSKMVSM AFGFYYLRHP IFRDRMPSPA LNFFRRLPSL SDRVL

Best Arabidopsis Sequence Match ( AT5G17980.1 )
(BLAST)

0001: MATTRKLVVE VVDAKDLTPK DGHGTSSPYV VLDYYGQRRR TRTIVRDLNP VWNETLEFSL AKRPSHQLFT DVLELDMYHD KNFGQTRRNN FLGRIRLGSD
0101: QFVGQGEEAL IYYPLEKKSL FNLVQGEIGL RVYYADEKPP PLKPTVAPLE TVVEEKTEET KAEGPDESKP PPETNDIPAE VKETVKPPQP PPEESSPAEG
0201: PKPDEEASPP LQENATVGGE EPPASESDKN EAEAKPVEEP PQNQPDGEDI VLESEDTMSW ASAPRSPLPE VIISRSVSGS IPETKNGPQP LRRSVSETAS
0301: YTSEISDVST IERSTFDLVE KMHYVFIRVV KARSLPTSGS PVTKISLSGT MIQSKPARKT SCFEWDQTFA FLRDSPDLSS SPILEISVWD SSTGIETSQF
0401: LGGICFDVSE IPLRDPPDSP LAPQWYRLEG GGAHNSDLML ATWTGTQADE SFPDAWKTDT AGNVTARAKV YMSSKLWYLR ATVIEAQDLL PPQLTAFKEA
0501: SFQLKAQLGS QVQKTKSAVT RNGAPSWNED LLFVAAEPFS DQLVFTLEYR TSKGPVTVGM ARVPLSAIER RVDDRLVASR WLGLEDPNDE KRGNRSRVHI
0601: RLCFDGGYHV MDEAAHVCSD YRPTARQLWK PAVGIVELGI IGCKNLLPMK TVNGKGSTDA YTVAKYGSKW VRTRTVSDSL DPKWNEQYTW KVYDPCTVLT
0701: IGVFDSWGVY EVDGGKEATR QDLRIGKVRI RISTLETGKA YRNTYPLLML VNGGVKKLGE IELAVRFVRT APPLDFLHVY TQPLLPLMHH IKPLSLFQED
0801: MLRNTAVKIL AAHLSRSEPP LRPEIVRYML DADTHTFSMR KVRANWLRIV NVVAGMVDVV RWVDDTRFWK NPTSTLLVHA LVVMLIWFPD LIVPTLAFYL
0901: FVIGAWNYRF RSRAALPHFD PRLSLADAAD RDELDEEFDV VPSNRPPEMV RLRYDKLRNV GARVQTILGE VAAQGEKMQA LVTWRDPRAT GIFVGLCFFV
1001: ALVLYLVPTK MVAMASGFYY FRHPIFRDRK PSPVLNFFRR LPSLSDRLM

Arabidopsis Description

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FJG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.