Factsheet for PGSC0003DMT400054936

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g007170.2.1	Tomato	cytosol	91.26	96.74
Bra036444.1-P	Field mustard	plasma membrane	23.04	79.73
VIT_08s0056g01530.t01	Wine grape	cytosol	73.09	73.9
KRH57988	Soybean	cytosol	70.8	73.35
KRH04520	Soybean	cytosol	71.0	72.44
AT3G03680.1	Thale cress	cytosol	70.8	70.11
CDY21171	Canola	cytosol	70.11	69.42
CDY29951	Canola	cytosol	70.31	69.34
Bra036443.1-P	Field mustard	cytosol	70.41	69.31
GSMUA_Achr10P...	Banana	cytosol	31.18	61.81
TraesCS4A01G300400.1	Wheat	cytosol	61.37	59.42
TraesCS4D01G011200.1	Wheat	cytosol, nucleus, plasma membrane	61.17	59.23
Zm00001d013654_P001	Maize	plasma membrane	61.27	58.99
TraesCS4B01G013400.1	Wheat	cytosol	61.37	58.91
OQU91253	Sorghum	cytosol, nucleus, plasma membrane	59.58	57.92
HORVU4Hr1G002160.1	Barley	plastid	61.27	55.29
PGSC0003DMT400029745	Potato	cytosol	39.13	50.97
PGSC0003DMT400060959	Potato	cytosol	38.43	50.46
PGSC0003DMT400060862	Potato	cytosol	38.73	50.45
PGSC0003DMT400046026	Potato	cytosol	38.23	48.67
PGSC0003DMT400055029	Potato	cytosol	36.25	47.53
PGSC0003DMT400065217	Potato	cytosol	47.96	46.13
PGSC0003DMT400011904	Potato	cytosol	35.15	45.91
PGSC0003DMT400011903	Potato	cytosol	25.12	44.86
PGSC0003DMT400013490	Potato	cytosol	23.83	44.53
PGSC0003DMT400087204	Potato	cytosol	35.65	44.21
PGSC0003DMT400045958	Potato	cytosol	43.59	44.12
PGSC0003DMT400025225	Potato	cytosol	43.69	43.56
PGSC0003DMT400088288	Potato	cytosol	43.59	43.55
PGSC0003DMT400014804	Potato	cytosol	42.8	43.06
PGSC0003DMT400000108	Potato	cytosol	42.9	42.81
PGSC0003DMT400089685	Potato	cytosol	43.3	42.5
PGSC0003DMT400023971	Potato	cytosol	43.3	42.5
PGSC0003DMT400030931	Potato	mitochondrion	7.05	40.34
PGSC0003DMT400065015	Potato	cytosol	44.59	40.27

Protein Annotations

EntrezGene:102581084	Gene3D:2.60.40.150	MapMan:35.1	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR000008	InterPro:IPR035892	UniProt:M1BX29	PFAM:PF00168
PFAM:PF08372	EnsemblPlantsGene:PGSC0003DMG400021319	PGSC:PGSC0003DMG400021319	EnsemblPlants:PGSC0003DMT400054936	InterPro:PRibTrfase_C	PFscan:PS50004
PANTHER:PTHR10024	PANTHER:PTHR10024:SF172	SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI0002967265
RefSeq:XP_006348476.1	SEG:seg	:	:	:	:

Description

C2 domain-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400021319]

Coordinates

chr1:-:3157247..3160524

Molecular Weight (calculated)

113486.0 Da

IEP (calculated)

8.059

GRAVY (calculated)

-0.411

Length

1007 amino acids

Sequence
(BLAST)

0001: MGDQICTRKV IVEVCNAKNL MPKDGQGTAS AFAIVDFDGQ RRRTKTKFRD LNPQWDERLE FLVHDVDSMA SEILELNVYN DKKIGKRSNF LGKVKISGST
0101: FVGVGLESLV YYPLEKRSVF SQIKGEIGLK IWYVDEEIPP PPPVTEEKKE EVAAEAAPEK KEEKPPTPAP EVKEEKPSTP TEEKKEKSEK NEEEKKPDES
0201: AEKKEETPPE NPKKDGEPPA ATPPPEVMEH PPIAQHKPPN KNPSANENTS ELKILHKNLS TGVDRRTGAF DLVDQMPFLY VRLVKAKRAH HEPDSSAYAK
0301: LVIGTHSIKT KSLADYREWD QVFAFDKDGL NSSSLEVSIW VEKKGADDKI VENCIGNVSF DLQEVPKRVP PDSPLAPQWY SLEGVTGDQN PPGNDVMLAV
0401: WLGTQADEAF NEAWQSDSGG LIPETRAKVY LSPKLWYLRL TVIQTQDLQL GSGGTEPKVR SPDLYVKAQL GAQLFKTSRT TVGSSNSASN PTWNEDLVFV
0501: AAEPFEPFLV ITVEDVTNGQ VVGHAKVQVT SIDKRTDDKS EPRSRWFNLI GDEKKPYAGR IHVRTCLEGG YHVLDEAAHL TSDVRATAKQ LSKPPIGLLE
0601: VGIRGANNLL PVKTKDGTRG TTDAYVVAKY GPKWVRTRTI LDRFNPRWNE QYTWDVYDPC TVLTIGVFDN GRYKHDDALK KDVRLGKLRV RLSTLDTNKV
0701: YMGTYSLMVL LPSGAKKMGD IEIALRFTCS SWLSLIQAYT NPMLPRMHYV RPFGPAQQDI LRHTAMRIVT ARLARSEPAL GQEVVQCMLD SDTHIWSMRR
0801: SKANWFRVVG CLSRAATLAR WLDGIRTWVH PPTTILVHLL LIAIVLCPHL VLPTICMYAF LIISLRYRYR QRVAITMDPR LSYVDAIGPD ELDEEFDGFP
0901: SSRPMEHVRV RYDRLRALAG RAQTLLGDVA AQGERLEALF NWRDPRATGI FVIVCLFASL VFYVVPFKAF VLGSGLYYLR HPRFRDDMPS VPVNFFRRLP
1001: PLSDQIL

Best Arabidopsis Sequence Match ( AT3G03680.1 )
(BLAST)

0001: MADNVLRKLI VEICSARNLM PKDGQGTASA YAIVDFDGQR RRTKTKFRDL NPQWDEKLEF FVHDVATMGE EILEINLCND KKTGKRSTFL GKVKIAGSAF
0101: ASAGSETLVY YPLEKRSVFS QIKGEIGLKA YYVDENPPAA PAATEPKPEA AAATEEKPPE IAKAEDGKKE TEAAKTEEKK EGDKKEEEKP KEEAKPDEKK
0201: PDAPPDTKAK KPDTAVAPPP PPAEVKNPPI PQKAETVKQN ELGIKPENVN RQDLIGSDLE LPSLTRDQNR GGGYDLVDRM PFLYIRVAKA KRAKNDGSNP
0301: VYAKLVIGTN GVKTRSQTGK DWDQVFAFEK ESLNSTSLEV SVWSEEKIEK EDKTTTTTES CLGTVSFDLQ EVPKRVPPDS PLAPQWYTLE SEKSPGNDVM
0401: LAVWLGTQAD EAFQEAWQSD SGGLIPETRS KVYLSPKLWY LRLTVIQTQD LQLGLGSEAK SKIPTTELYV KAQLGPQVFK TARTSIGPSA SSSGSGNPTW
0501: NEDLVFVASE PFEPFLIVTV EDITNGQSIG QTKIHMGSVE RRNDDRTEPK SRWFNLAGDE KKPYSGRIHV KVCLEGGYHV LDEAAHVTSD VRPSAKQLAK
0601: PPIGLLEVGI RGATNLLPVK TRDGTRGTTD AYVVAKYGPK WIRTRTILDR FNPRWNEQYT WDVYDPCTVL TIGVFDNGRY KRDESGKQGR DVRVGKIRVR
0701: LSTLDMNRIY LNSYTLTVIL PSGAKKMGEV EIAVRFSCPS WLSIIQAYVT PMLPRMHYVR PLGPAQQDIL RHTAMRIVTA RLARSEPPLG QEVVQYMLDT
0801: DNHVWSMRRS KANWFRVITF LSRAATIARW IHGIRTWVHP PTTVLVHLLL VAIVLCPHLV LPTVFMYAFL ILALRFRYRG RVKVNSVDPR LSCVDSVAPD
0901: ELDEEFDGFP TTRQPEVVRI RYDRLRALAG RAQTLLGDVA AQGERVEALF NWRDPRATCI FVVFCLFASF LFYIVPFKVF LLGSGFYYIR HPRFRDDMPS
1001: VPVNFFRRLP SMSDQIL

Arabidopsis Description

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SS68]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.