Factsheet for PGSC0003DMT400030931

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 3
peroxisome 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G481700.1	Wheat	cytosol	14.77	20.63
GSMUA_Achr1P16550_001	Banana	cytosol	30.68	15.84
PGSC0003DMT400046026	Potato	cytosol	66.48	14.79
Zm00001d036804_P001	Maize	cytosol	55.68	14.5
PGSC0003DMT400060959	Potato	cytosol	55.11	12.65
Os06t0614000-01	Rice	cytosol	58.52	12.5
GSMUA_Achr1P16560_001	Banana	endoplasmic reticulum, plasma membrane	18.75	12.45
TraesCS7B01G302900.1	Wheat	cytosol	56.82	12.32
PGSC0003DMT400060862	Potato	cytosol	53.98	12.29
HORVU7Hr1G094580.2	Barley	cytosol	56.82	12.25
TraesCS7A01G403500.1	Wheat	cytosol	56.25	12.18
EER90045	Sorghum	cytosol	56.25	12.18
TraesCS7D01G396900.1	Wheat	cytosol	56.25	12.16
PGSC0003DMT400029745	Potato	cytosol	53.41	12.16
GSMUA_Achr9P27720_001	Banana	mitochondrion	33.52	12.07
GSMUA_Achr3P11130_001	Banana	cytosol	47.73	11.72
PGSC0003DMT400055029	Potato	cytosol	50.0	11.46
PGSC0003DMT400011904	Potato	cytosol	47.73	10.89
TraesCS2D01G333300.1	Wheat	cytosol	47.73	10.22
TraesCS2A01G329400.1	Wheat	cytosol	47.16	10.06
Zm00001d003321_P001	Maize	cytosol	47.16	9.62
KXG26530	Sorghum	cytosol	47.16	9.56
PGSC0003DMT400087204	Potato	cytosol	43.75	9.48
Os04t0472900-01	Rice	cytosol	46.02	9.47
PGSC0003DMT400000108	Potato	cytosol	53.98	9.42
PGSC0003DMT400014804	Potato	cytosol	53.41	9.39
PGSC0003DMT400065015	Potato	cytosol	57.95	9.15
VIT_04s0023g03270.t01	Wine grape	plasma membrane	8.52	9.04
PGSC0003DMT400023971	Potato	cytosol	51.14	8.77
PGSC0003DMT400089685	Potato	cytosol	51.14	8.77
PGSC0003DMT400011903	Potato	cytosol	26.7	8.33
PGSC0003DMT400025225	Potato	cytosol	47.73	8.32
PGSC0003DMT400045958	Potato	cytosol	40.91	7.24
PGSC0003DMT400054936	Potato	cytosol	40.34	7.05
PGSC0003DMT400065217	Potato	cytosol	40.91	6.88
PGSC0003DMT400088288	Potato	cytosol	38.64	6.75
TraesCS2B01G352900.1	Wheat	mitochondrion	30.11	6.17
PGSC0003DMT400013490	Potato	cytosol	7.95	2.6
HORVU2Hr1G082010.3	Barley	cytosol	0.57	0.1

Protein Annotations

EnsemblPlants:PGSC0003DMT400030931	EnsemblPlantsGene:PGSC0003DMG400011847	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR10024
PANTHER:PTHR10024:SF236	PGSC:PGSC0003DMG400011847	SEG:seg	SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI000295E9FD
UniProt:M1AUZ4	MapMan:35.1	:	:	:	:

Description

Anthranilate phosphoribosyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400011847]

Coordinates

chr3:-:15009265..15010699

Molecular Weight (calculated)

20406.5 Da

IEP (calculated)

6.919

GRAVY (calculated)

-0.379

Length

176 amino acids

Sequence
(BLAST)

001: MISNFLYKAR IQLGKYDHIQ GGGGWISSEV TSTYDLVEQM HFHYVRVVKA RDLPPKPVTG SCDPYVDQRD KEMEQRDDYL GEVVFDMNEV PTRVPPDTPL
101: APQWYRLEDR RGGERLRSVA GRIQTVIWDM ATQLLKEKDY RLYCFIVFCL IATLILYVNC DTFQNHSSAL PKAPKI

Best Arabidopsis Sequence Match ( AT5G06850.1 )
(BLAST)

001: MAAKDGAKSQ EDYKLKDMKP ELGERWPHGG QRGGTGWIGS ERAASTYDLV EQMFYLYVRV VKAKDLPPNP VTSNCDPYVE VKIGNYKGKT KHFEKRTNPE
101: WNQVFAFSKD KVQSSTVEVF VRDKEMVTRD EYIGKVVFDM REVPTRVPPD SPLAPQWYRL EDRRGESKKR GEVMVAVWLG TQADEAFPDA WHSDASSVQG
201: EGVQSVRSKV YVSPKLWYLR VNVIEAQDVE PSDRSQPPQA FVKVQVGNQI LKTKLCPNKT TNPMWNEDLV FVAAEPFEEQ FFLTVENKVT PAKDEVMGRL
301: ISPLSVFEKR LDHRAVHSKW YNLEKFGFGA LEGDKRHELK FSSRIHLRVC LEGGYHVMDE STLYISDVKP TARQLWKSPI GILEVGILSA QGLSPMKTKD
401: GKATTDPYCV AKYGQKWVRT RTIIDSSSPK WNEQYTWEVY DPCTVITLGV FDNCHLGGSE KSNSGAKVDS RIGKVRIRLS TLEADRIYTH SYPLLVLQTK
501: GLKKMGEVQL AVRFTCLSLA HMIYLYGHPL LPKMHYLHPF TVNQLDSLRY QAMSIVAARL SRAEPPLRKE NVEYMLDVDS HMWSMRRSKA NFFRIVSVFA
601: GLIAMSKWLG DVCYWKNPLT TILFHVLFFI LICYPELILP TTFLYMFLIG LWNFRFRPRH PAHMDTKVSW AEAASPDELD EEFDTFPTSK GQDVVKMRYD
701: RLRSVAGRIQ MVVGDIATQG ERFQALLSWR DPRATCLFVI FCLVAAMILY VTPFKIIALA GGMFWMRHPK FRSKMPSAPS NFFRKLPSKA DCML

Arabidopsis Description

FTIP1FT-interacting protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.