Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400089685 | Potato | cytosol | 100.0 | 100.0 |
| Solyc11g022460.1.1 | Tomato | nucleus | 68.42 | 94.99 |
| Solyc11g022400.1.1 | Tomato | nucleus | 84.21 | 92.01 |
| VIT_18s0072g01170.t01 | Wine grape | cytosol | 71.83 | 73.55 |
| KRH23748 | Soybean | nucleus | 70.86 | 71.98 |
| KRH44923 | Soybean | nucleus | 71.05 | 71.47 |
| CDY21373 | Canola | cytosol | 68.91 | 69.72 |
| CDY04800 | Canola | cytosol | 68.42 | 69.71 |
| Bra024523.1-P | Field mustard | cytosol | 68.81 | 69.49 |
| AT1G22610.1 | Thale cress | cytosol | 69.01 | 68.8 |
| TraesCS1B01G279300.1 | Wheat | mitochondrion | 49.71 | 66.23 |
| PGSC0003DMT400029745 | Potato | cytosol | 49.61 | 65.85 |
| Zm00001d038340_P001 | Maize | plasma membrane, plastid | 51.85 | 65.76 |
| EES19579 | Sorghum | plastid | 51.66 | 65.59 |
| PGSC0003DMT400060959 | Potato | cytosol | 49.03 | 65.58 |
| Zm00001d010202_P001 | Maize | plasma membrane | 51.66 | 65.51 |
| TraesCS1D01G268800.1 | Wheat | plasma membrane, plastid | 51.46 | 65.43 |
| Os05t0429700-01 | Rice | plastid | 51.27 | 65.42 |
| TraesCS1A01G268700.1 | Wheat | plasma membrane, plastid | 51.36 | 65.3 |
| HORVU1Hr1G075050.2 | Barley | mitochondrion | 51.17 | 65.22 |
| PGSC0003DMT400060862 | Potato | cytosol | 49.03 | 65.07 |
| GSMUA_Achr3P22190_001 | Banana | cytosol | 52.34 | 62.73 |
| GSMUA_Achr10P... | Banana | cytosol | 47.47 | 61.57 |
| TraesCS1A01G014300.1 | Wheat | cytosol | 47.47 | 61.57 |
| GSMUA_Achr5P01190_001 | Banana | cytosol | 36.06 | 60.86 |
| TraesCS1D01G012500.1 | Wheat | cytosol, peroxisome, plasma membrane | 42.11 | 60.85 |
| Os04t0691800-01 | Rice | plasma membrane | 59.65 | 59.94 |
| HORVU1Hr1G001710.1 | Barley | mitochondrion | 47.37 | 59.41 |
| OQU82647 | Sorghum | cytosol, nucleus, plasma membrane | 59.45 | 59.4 |
| PGSC0003DMT400055029 | Potato | cytosol | 44.25 | 59.11 |
| PGSC0003DMT400046026 | Potato | cytosol | 45.32 | 58.79 |
| PGSC0003DMT400011904 | Potato | cytosol | 44.05 | 58.63 |
| Zm00001d002939_P001 | Maize | cytosol, nucleus, plasma membrane | 59.94 | 58.24 |
| TraesCS2B01G621600.1 | Wheat | cytosol | 29.04 | 57.98 |
| TraesCS2B01G622500.1 | Wheat | cytosol, nucleus, plasma membrane | 57.99 | 57.38 |
| TraesCS2A01G557900.1 | Wheat | cytosol, nucleus, plasma membrane | 58.09 | 57.25 |
| HORVU2Hr1G126730.1 | Barley | cytosol, nucleus, plasma membrane | 57.5 | 56.57 |
| TraesCS2D01G571700.1 | Wheat | cytosol, nucleus, plasma membrane | 57.99 | 56.45 |
| TraesCS2A01G558400.1 | Wheat | cytosol | 39.86 | 56.26 |
| PGSC0003DMT400087204 | Potato | cytosol | 43.86 | 55.42 |
| PGSC0003DMT400011903 | Potato | cytosol | 30.41 | 55.32 |
| PGSC0003DMT400014804 | Potato | cytosol | 53.41 | 54.75 |
| PGSC0003DMT400000108 | Potato | cytosol | 53.41 | 54.31 |
| PGSC0003DMT400013490 | Potato | cytosol | 27.49 | 52.32 |
| PGSC0003DMT400030931 | Potato | mitochondrion | 8.77 | 51.14 |
| PGSC0003DMT400025225 | Potato | cytosol | 49.22 | 50.0 |
| PGSC0003DMT400065015 | Potato | cytosol | 53.8 | 49.51 |
| PGSC0003DMT400054936 | Potato | cytosol | 42.5 | 43.3 |
| PGSC0003DMT400065217 | Potato | cytosol | 43.57 | 42.69 |
| PGSC0003DMT400045958 | Potato | cytosol | 39.28 | 40.5 |
| PGSC0003DMT400088288 | Potato | cytosol | 39.47 | 40.18 |
| TraesCSU01G020600.1 | Wheat | cytosol | 22.22 | 32.9 |
Protein Annotations
| EntrezGene:102596773 | Gene3D:2.60.40.150 | MapMan:35.1 | InterPro:C2_dom | InterPro:C2_domain_sf | ncoils:Coil |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR000008 | InterPro:IPR035892 | UniProt:M1DIP5 |
| PFAM:PF00168 | PFAM:PF08372 | EnsemblPlantsGene:PGSC0003DMG402009270 | PGSC:PGSC0003DMG402009270 | EnsemblPlants:PGSC0003DMT400023971 | InterPro:PRibTrfase_C |
| PFscan:PS50004 | PANTHER:PTHR10024 | PANTHER:PTHR10024:SF272 | SMART:SM00239 | SUPFAM:SSF49562 | TMHMM:TMhelix |
| UniParc:UPI000295A0B0 | RefSeq:XP_006350321.1 | SEG:seg | : | : | : |
Description
Synaptotagmin [Source:PGSC_GENE;Acc:PGSC0003DMG402009270]
Coordinates
chr11:-:14569893..14574873
Molecular Weight (calculated)
117108.0 Da
IEP (calculated)
9.497
GRAVY (calculated)
-0.279
Length
1026 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAKLIAEVLD ASDLMPKDGQ GSASPFVEVD FDEQRQRTQT KNKDLNPQWN EKLVFNIKNP RDLENQTISV YVYNDQKQGH HKNFLGRVKI SGAFIPFSDS
0101: EALVQRYPLD KRGIFSHIKG DIALRIYAVL GGGVADVLGG GGNVIPPSVT VETEQQNVNN GEDRATPFTL FQEINTNNFE EQYMKDAEIK KKDKKKKKEP
0201: EVRTFHSIPA PAPVPVPVPA SGLSPPPVVI EKRADFAKAG GPMASNVMQM QMGGGPRPEF GLVETRPPLA ARMGYWGRDK TASTYDLVEP MHFLYINVVK
0301: ARDLPVMDIS GSLDPYVEVK LGNYKGVTRH YEKNQYPVWN SVFAFSKERL QSNLIEVTVK DKDFGKDDIV GKVMFDIAEV PLRVPPDSPL APQWYRLINK
0401: KGEKIPQGEI MLAVWMGTQA DEAFPEAWHS DAHMASQQNL VNTRSKVYFS PKLYYLRVHV IEAQDLLPSD RSRMPEAYAK LQLGHQVRTT KPSPMRHINP
0501: VWNEELMFVA SEPFEEYLII DVVDRVGPGK DELIGRAMIS FKNIPTRVDI SKLPDAIWFN LLKPSHAADD DEKKKEVKFS SKIHLRIWID AGYHVLDEST
0601: HSSSDLQPSS KFLRKPSIGL LELGILSAKN LMPMKSKEGR ITDSYCVAKY GNKWVRTRTL IDTLAPRWNE QFSWEVFDPC TVVTIGVFDN CHINGKDEAR
0701: DQRIGKVRVR LSTLETDRIY THFYPLLVLT PSGLRKHGEL HLAIRFTCTA WVNMVAQYGK PLLPKMHYVQ PISVRHIDWL RHQAMQIVAA RLARAEPPLR
0801: REVVEYMLDV DYHMFSLRRS KANFFRIMGL LSGISAVHGW FNGICNWRNP LTTILVHVLF LILICYPELI LPTIFLYLFV IGLWNYRFRP RAPPHMDARL
0901: SQAENAHPDE LDEEFDTFPT SRQTDVIRMR YDRLRSVAGR VQTVVGDLAT QGERALSILS WRDPRATAIF IILALIWAVF LYVTPFQVVA VLIGLYWLRH
1001: PRFRSKLPSV PVNFFKRLPS KSDMLL
0101: EALVQRYPLD KRGIFSHIKG DIALRIYAVL GGGVADVLGG GGNVIPPSVT VETEQQNVNN GEDRATPFTL FQEINTNNFE EQYMKDAEIK KKDKKKKKEP
0201: EVRTFHSIPA PAPVPVPVPA SGLSPPPVVI EKRADFAKAG GPMASNVMQM QMGGGPRPEF GLVETRPPLA ARMGYWGRDK TASTYDLVEP MHFLYINVVK
0301: ARDLPVMDIS GSLDPYVEVK LGNYKGVTRH YEKNQYPVWN SVFAFSKERL QSNLIEVTVK DKDFGKDDIV GKVMFDIAEV PLRVPPDSPL APQWYRLINK
0401: KGEKIPQGEI MLAVWMGTQA DEAFPEAWHS DAHMASQQNL VNTRSKVYFS PKLYYLRVHV IEAQDLLPSD RSRMPEAYAK LQLGHQVRTT KPSPMRHINP
0501: VWNEELMFVA SEPFEEYLII DVVDRVGPGK DELIGRAMIS FKNIPTRVDI SKLPDAIWFN LLKPSHAADD DEKKKEVKFS SKIHLRIWID AGYHVLDEST
0601: HSSSDLQPSS KFLRKPSIGL LELGILSAKN LMPMKSKEGR ITDSYCVAKY GNKWVRTRTL IDTLAPRWNE QFSWEVFDPC TVVTIGVFDN CHINGKDEAR
0701: DQRIGKVRVR LSTLETDRIY THFYPLLVLT PSGLRKHGEL HLAIRFTCTA WVNMVAQYGK PLLPKMHYVQ PISVRHIDWL RHQAMQIVAA RLARAEPPLR
0801: REVVEYMLDV DYHMFSLRRS KANFFRIMGL LSGISAVHGW FNGICNWRNP LTTILVHVLF LILICYPELI LPTIFLYLFV IGLWNYRFRP RAPPHMDARL
0901: SQAENAHPDE LDEEFDTFPT SRQTDVIRMR YDRLRSVAGR VQTVVGDLAT QGERALSILS WRDPRATAIF IILALIWAVF LYVTPFQVVA VLIGLYWLRH
1001: PRFRSKLPSV PVNFFKRLPS KSDMLL
0001: MNKLVVEIVD ASDLMPKDGQ GSASPFVEVE FDEQRQRTQT RFKDLNPQWN EKLVFNVGDL KRLNNKTVDV TVYDDRRDNQ PGKFLGRVKI AGAVVPLSES
0101: ESGVQRYPLD KRGLFSNIKG DIALRIYAAP IDGGDFVSPP PDFAEKVMKE DKRFESQEFQ FQNQNQNQNH YEQFEDEINN METLKPTKKK EKESRTFHSI
0201: GAHAGGGGGA PPMSQAKQAY PPPPNQPEFR SDFMRAPGPP TGAVMQMQPP RQQNPEFQLI ETSPPLAARM RQSYYYRSSG DKTSSTYDLV EQMHYLYVSV
0301: VKARDLPVMD VSGSLDPYVE VKLGNYKGLT KHLEKNSNPI WKQIFAFSKE RLQSNLLEVT VKDKDLLTKD DFVGRVHIDL TEVPLRVPPD SPLAPQWYRL
0401: EDKKGMKTNR GEIMLAVWMG TQADESFPDA WHSDAHRVSH SNLSNTRSKV YFSPKLYYLR IHVMEAQDLV PSDKGRVPDA IVKIQAGNQM RATRTPQMRT
0501: MNPQWHEELM FVVSEPFEDM VIVSVDDRIG PGKDEILGRV FIPVRDVPVR QEVGKMPDPR WFNLQRHSMS MEEENEKRKE KFSSKILLRV CIEAGYHVLD
0601: ESTHFSSDLQ PSSKHLRKPS IGILELGILS ARNLMPMKGK DGRMTDPYCV AKYGNKWVRT RTLLDALAPK WNEQYTWEVH DPCTVITIGV FDNSHVNDGG
0701: DFKDQRIGKV RVRLSTLETD RVYTHFYPLL VLTPGGLKKN GELQLALRYT CTGFVNMMAQ YGRPLLPKMH YIQPIPVRHI DLLRHQAMQI VATRLSRSEP
0801: PLRREVVEYM LDVDYHMFSL RRSKANFSRI MSLLSSVTLV CKWFNDICTW RNPITTCLVH VLFLILVCYP ELILPTVFLY LFVIGMWNYR YRPRHPPHMD
0901: ARVSQADNAH PDELDEEFDT FPTSRPADIV RMRYDRLRSV GGRVQTVVGD LATQGERIQA LLSWRDPRAT ALFIVFALIW AVFIYVTPFQ VIAIIIGLFM
1001: LRHPRFRSRM PSVPANFFKR LPAKSDMLL
0101: ESGVQRYPLD KRGLFSNIKG DIALRIYAAP IDGGDFVSPP PDFAEKVMKE DKRFESQEFQ FQNQNQNQNH YEQFEDEINN METLKPTKKK EKESRTFHSI
0201: GAHAGGGGGA PPMSQAKQAY PPPPNQPEFR SDFMRAPGPP TGAVMQMQPP RQQNPEFQLI ETSPPLAARM RQSYYYRSSG DKTSSTYDLV EQMHYLYVSV
0301: VKARDLPVMD VSGSLDPYVE VKLGNYKGLT KHLEKNSNPI WKQIFAFSKE RLQSNLLEVT VKDKDLLTKD DFVGRVHIDL TEVPLRVPPD SPLAPQWYRL
0401: EDKKGMKTNR GEIMLAVWMG TQADESFPDA WHSDAHRVSH SNLSNTRSKV YFSPKLYYLR IHVMEAQDLV PSDKGRVPDA IVKIQAGNQM RATRTPQMRT
0501: MNPQWHEELM FVVSEPFEDM VIVSVDDRIG PGKDEILGRV FIPVRDVPVR QEVGKMPDPR WFNLQRHSMS MEEENEKRKE KFSSKILLRV CIEAGYHVLD
0601: ESTHFSSDLQ PSSKHLRKPS IGILELGILS ARNLMPMKGK DGRMTDPYCV AKYGNKWVRT RTLLDALAPK WNEQYTWEVH DPCTVITIGV FDNSHVNDGG
0701: DFKDQRIGKV RVRLSTLETD RVYTHFYPLL VLTPGGLKKN GELQLALRYT CTGFVNMMAQ YGRPLLPKMH YIQPIPVRHI DLLRHQAMQI VATRLSRSEP
0801: PLRREVVEYM LDVDYHMFSL RRSKANFSRI MSLLSSVTLV CKWFNDICTW RNPITTCLVH VLFLILVCYP ELILPTVFLY LFVIGMWNYR YRPRHPPHMD
0901: ARVSQADNAH PDELDEEFDT FPTSRPADIV RMRYDRLRSV GGRVQTVVGD LATQGERIQA LLSWRDPRAT ALFIVFALIW AVFIYVTPFQ VIAIIIGLFM
1001: LRHPRFRSRM PSVPANFFKR LPAKSDMLL
Arabidopsis Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKA3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.