CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010202_P001	Maize	plasma membrane	96.91	96.79
Zm00001d038340_P001	Maize	plasma membrane, plastid	96.04	95.92
Os05t0429700-01	Rice	plastid	90.22	90.67
TraesCS1B01G279300.1	Wheat	mitochondrion	85.15	89.35
TraesCS1D01G268800.1	Wheat	plasma membrane, plastid	89.23	89.34
HORVU1Hr1G075050.2	Barley	mitochondrion	88.99	89.32
TraesCS1A01G268700.1	Wheat	plasma membrane, plastid	89.11	89.22
EER90047	Sorghum	cytosol	60.27	62.84
EER90045	Sorghum	cytosol	59.03	58.67
GSMUA_Achr3P22190_001	Banana	cytosol	58.79	55.49
OQU82647	Sorghum	cytosol, nucleus, plasma membrane	69.31	54.53
GSMUA_Achr10P...	Banana	cytosol	51.61	52.72
VIT_18s0072g01170.t01	Wine grape	cytosol	65.35	52.69
KRH23748	Soybean	nucleus	65.35	52.28
CDY04800	Canola	cytosol	64.6	51.84
CDY21373	Canola	cytosol	64.85	51.68
PGSC0003DMT400089685	Potato	cytosol	65.59	51.66
PGSC0003DMT400023971	Potato	cytosol	65.59	51.66
GSMUA_Achr5P01190_001	Banana	cytosol	38.86	51.64
KRH44923	Soybean	nucleus	65.1	51.57
Bra024523.1-P	Field mustard	cytosol	64.73	51.48
AT1G22610.1	Thale cress	cytosol	65.22	51.21
Solyc11g022400.1.1	Tomato	nucleus	59.28	51.01
KXG26530	Sorghum	cytosol	54.7	50.92
EES05763	Sorghum	cytosol	45.17	47.04
KXG27468	Sorghum	cytosol	58.42	46.64
EER99386	Sorghum	cytosol	53.84	43.24
EES07745	Sorghum	cytosol	53.96	43.0
Solyc11g022460.1.1	Tomato	nucleus	36.88	40.32
KXG27914	Sorghum	cytosol	44.06	35.64
EES03181	Sorghum	cytosol	45.92	34.32
OQU91253	Sorghum	cytosol, nucleus, plasma membrane	43.81	34.17
OQU88487	Sorghum	cytosol	40.1	30.03

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	EntrezGene:8058500	InterPro:C2_dom	InterPro:C2_domain_sf	UniProt:C5YYC5
EnsemblPlants:EES19579	ProteinID:EES19579	ProteinID:EES19579.1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR000008	InterPro:IPR035892	PFAM:PF00168	PFAM:PF08372	InterPro:PRibTrfase_C	PFscan:PS50004
PANTHER:PTHR10024	PANTHER:PTHR10024:SF272	SMART:SM00239	EnsemblPlantsGene:SORBI_3009G148000	SUPFAM:SSF49562	TMHMM:TMhelix
UniParc:UPI0001A89484	RefSeq:XP_002441149.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:50511733..50514791

Molecular Weight (calculated)

91005.2 Da

IEP (calculated)

9.898

GRAVY (calculated)

-0.110

Length

808 amino acids

Sequence
(BLAST)

001: MKGAMPPRPF MMPGPGGPMP PPQQQFGLVE TRPPLAAVLR PRFNIPGLHP SAAAAAAATG AGKIASTYDL VEPMRFLYVH VVKARDLPAV SATGAIDPFV
101: EVKLGNFKGT TAVKAASHNP SWQQVFAFSA THLQSHLLEV ALKAKDLAGD DLVGRVVFDL AEVPVRVPPD SPLAPQWYRL EAKRGDKLPH GEIMLSVWLG
201: TQADEAFPDA WHSDAHAAAG PAAVASTRAK VYFSPKLVYL RVAAIGAQDL IPHDTSRPMS ACVKLQLAGQ VRRTRPGAPP GTPNPIWNEE FMFVASEPFD
301: EPLVVTVEDR VAPGRDEMLG RIVLPLAAAM PRHDHFGKPV EPRWYSLMRP SDDPDKKEIK FASKIQIRMS LDFGYHVLDE STYYSSDLQP SSKPARKPSI
401: GMLELGVLGA RNLIPMKPKD GRTTDAYCVA KYGPKWVRTR TILDTLNPQW NEQYTWEVFD PCTVITVVVF DNGQIGKNGG GPDQRIGKVR IRLSTLETDR
501: VYTHFYPLLV LHPSGLKKTG ELHLAVRFTC TAWVNMMALY GRPLLPKMHY TQPIAVMQLD YLRHQAMQIV AARLSRAEPP LRREIVEYML DVDSHMFSLR
601: RSKANFHRIT SLFFGFLAML KWYDGIRSWR NPITTMLVHM LFLILICYPE LILPTVFLYM FMIGLWNYRY RPRHPSHMDT KLSHAELTHP DELDEEFDTF
701: PSSRPAEIVR MRYDRLRSVG GRVQTVVGDL ATQGERAHAL LSWRDPRATA IFIFLSLVVA IVLYVTPFQV LMVIGMLYLL RHPRFRSRMP SVPFNFYRRL
801: PAKSDMLL

Best Arabidopsis Sequence Match ( AT1G22610.1 )
(BLAST)

0001: MNKLVVEIVD ASDLMPKDGQ GSASPFVEVE FDEQRQRTQT RFKDLNPQWN EKLVFNVGDL KRLNNKTVDV TVYDDRRDNQ PGKFLGRVKI AGAVVPLSES
0101: ESGVQRYPLD KRGLFSNIKG DIALRIYAAP IDGGDFVSPP PDFAEKVMKE DKRFESQEFQ FQNQNQNQNH YEQFEDEINN METLKPTKKK EKESRTFHSI
0201: GAHAGGGGGA PPMSQAKQAY PPPPNQPEFR SDFMRAPGPP TGAVMQMQPP RQQNPEFQLI ETSPPLAARM RQSYYYRSSG DKTSSTYDLV EQMHYLYVSV
0301: VKARDLPVMD VSGSLDPYVE VKLGNYKGLT KHLEKNSNPI WKQIFAFSKE RLQSNLLEVT VKDKDLLTKD DFVGRVHIDL TEVPLRVPPD SPLAPQWYRL
0401: EDKKGMKTNR GEIMLAVWMG TQADESFPDA WHSDAHRVSH SNLSNTRSKV YFSPKLYYLR IHVMEAQDLV PSDKGRVPDA IVKIQAGNQM RATRTPQMRT
0501: MNPQWHEELM FVVSEPFEDM VIVSVDDRIG PGKDEILGRV FIPVRDVPVR QEVGKMPDPR WFNLQRHSMS MEEENEKRKE KFSSKILLRV CIEAGYHVLD
0601: ESTHFSSDLQ PSSKHLRKPS IGILELGILS ARNLMPMKGK DGRMTDPYCV AKYGNKWVRT RTLLDALAPK WNEQYTWEVH DPCTVITIGV FDNSHVNDGG
0701: DFKDQRIGKV RVRLSTLETD RVYTHFYPLL VLTPGGLKKN GELQLALRYT CTGFVNMMAQ YGRPLLPKMH YIQPIPVRHI DLLRHQAMQI VATRLSRSEP
0801: PLRREVVEYM LDVDYHMFSL RRSKANFSRI MSLLSSVTLV CKWFNDICTW RNPITTCLVH VLFLILVCYP ELILPTVFLY LFVIGMWNYR YRPRHPPHMD
0901: ARVSQADNAH PDELDEEFDT FPTSRPADIV RMRYDRLRSV GGRVQTVVGD LATQGERIQA LLSWRDPRAT ALFIVFALIW AVFIYVTPFQ VIAIIIGLFM
1001: LRHPRFRSRM PSVPANFFKR LPAKSDMLL

Arabidopsis Description

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKA3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.