Factsheet for PGSC0003DMT400013490

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67030	Soybean	endoplasmic reticulum, mitochondrion, nucleus	65.31	45.42
PGSC0003DMT400060959	Potato	cytosol	64.56	45.37
KRG95352	Soybean	endoplasmic reticulum	65.12	45.29
PGSC0003DMT400029745	Potato	cytosol	64.94	45.28
AT3G57880.3	Thale cress	cytosol	64.75	45.15
PGSC0003DMT400060862	Potato	cytosol	64.19	44.76
KRH32992	Soybean	cytosol	64.01	44.63
Bra003302.1-P	Field mustard	cytosol	63.82	44.44
CDX67712	Canola	cytosol	63.82	44.44
CDX98254	Canola	cytosol	63.64	44.32
CDY69710	Canola	cytosol	63.82	44.16
Bra014601.1-P	Field mustard	cytosol	63.64	44.09
AT1G51570.1	Thale cress	cytosol	63.45	44.07
VIT_08s0007g06170.t01	Wine grape	cytosol	63.27	43.89
EER90047	Sorghum	cytosol	62.34	43.35
Os05t0370600-01	Rice	plastid	62.15	43.28
HORVU5Hr1G073350.1	Barley	cytosol	61.97	43.15
TraesCS5D01G273300.1	Wheat	cytosol	61.97	43.15
TraesCS5B01G265100.1	Wheat	cytosol	61.97	43.15
PGSC0003DMT400011903	Potato	cytosol	45.08	43.09
TraesCS5A01G265400.1	Wheat	cytosol	61.78	43.02
Zm00001d036801_P001	Maize	plasma membrane	61.6	42.89
Zm00001d046749_P001	Maize	mitochondrion	61.22	42.58
PGSC0003DMT400011904	Potato	cytosol	60.3	42.15
CDY47660	Canola	endoplasmic reticulum	63.82	41.55
TraesCS5B01G171600.1	Wheat	cytosol	59.0	41.25
TraesCS5D01G178600.1	Wheat	cytosol	58.81	41.12
HORVU5Hr1G053320.2	Barley	cytosol	58.63	40.99
TraesCS5A01G174100.1	Wheat	cytosol	57.88	40.89
PGSC0003DMT400055029	Potato	cytosol	54.55	38.28
PGSC0003DMT400046026	Potato	cytosol	54.17	36.92
PGSC0003DMT400087204	Potato	cytosol	53.43	35.47
PGSC0003DMT400014804	Potato	cytosol	53.99	29.07
PGSC0003DMT400000108	Potato	cytosol	54.36	29.04
GSMUA_Achr9P12510_001	Banana	cytosol	21.71	28.89
PGSC0003DMT400025225	Potato	cytosol	52.5	28.02
PGSC0003DMT400089685	Potato	cytosol	52.32	27.49
PGSC0003DMT400023971	Potato	cytosol	52.32	27.49
PGSC0003DMT400065015	Potato	cytosol	55.1	26.64
PGSC0003DMT400065217	Potato	cytosol	49.72	25.6
PGSC0003DMT400054936	Potato	cytosol	44.53	23.83
PGSC0003DMT400045958	Potato	cytosol	42.3	22.91
PGSC0003DMT400088288	Potato	cytosol	42.3	22.62
PGSC0003DMT400030931	Potato	mitochondrion	2.6	7.95

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR000008	InterPro:IPR035892	UniProt:M1A2X4	PFAM:PF00168	PFAM:PF08372
EnsemblPlantsGene:PGSC0003DMG400005262	PGSC:PGSC0003DMG400005262	EnsemblPlants:PGSC0003DMT400013490	InterPro:PRibTrfase_C	PFscan:PS50004	PANTHER:PTHR31425
PANTHER:PTHR31425:SF4	SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI000296BC6E	SEG:seg

Description

Anthranilate phosphoribosyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400005262]

Coordinates

chr3:+:36369484..36373547

Molecular Weight (calculated)

61567.4 Da

IEP (calculated)

6.924

GRAVY (calculated)

-0.161

Length

539 amino acids

Sequence
(BLAST)

001: MGTQAEEIFP ESWHSDDASS ADVMENIRSK VYLLPKLWYL RVDVFKAQDL IPSDEYRLPE VFVKASLGNQ TRRTKFANRE SFNPVWDESL MFVAVEPFDV
101: LILSVEDKVA SDKDEVLGRC VVPLSDVEMR LDEKPVRCLW YEFVKQATIR GEKEEKIRSV GNILMSISLE GGYHVLDEST CDSSDLRTTA KQLWKSSIGV
201: LELGILNAQG LKPMKRKDGQ ATTDAYCVAK YGVKWVTTRT ITNSLSPTWN EHYNWEVFDP CTVLTIGVFD NSNLQGGDKV EGAKDSRIGK VRIRLSTLQA
301: DRVYALSYPL MLFDNAGVRK TGEIYLTVRF ICSSSLNTTY LYSQPLLPKM HYLQNLTKAS ESYLRHQAQQ IIIMRLNRAD PPMGKAVVEY MLESGPSMWS
401: IRKSRVNFFR LMAILEAVAK RFDHICNWRN PIITFLIHIL FIILVLNPKL ILPTFFLSLS LISIWNYRKK PMHPPLTDTC LSCADTALPD ELSEEFDGFP
501: TSFSPDIVSM RYDRLRMIAA TIQTVVGDWA TQGERLERP

Best Arabidopsis Sequence Match ( AT1G51570.1 )
(BLAST)

001: MQRPPPEDFS LKETKPHLGG GKVTGDKLTT TYDLVEQMQY LYVRVVKAKE LPGKDLTGSC DPYVEVKLGN YRGTTRHFEK KSNPEWNQVF AFSKDRVQAS
101: YLEATVKDKD LVKDDLIGRV VFDLNEIPKR VPPDSPLAPQ WYRLEDGKGQ KVKGELMLAV WFGTQADEAF PEAWHSDAAT VSGTDALANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPSDKGR YPEVFVKVIM GNQALRTRVS QSRSINPMWN EDLMFVVAEP FEEPLILSVE DRVAPNKDEV LGRCAVPLQY LDKRFDYRPV
301: NSRWFNLEKH VIMEGGEKKE IKFASKIHMR ICLEGGYHVL DESTHYSSDL RPTAKQLWKP NIGVLELGVL NATGLMPMKA KEGGRGTTDA YCVAKYGQKW
401: IRTRTIIDSF TPRWNEQYTW EVFDPCTVVT VGVFDNCHLH GGDKNNGGGK DSRIGKVRIR LSTLEADRVY THSYPLLVLH PSGVKKMGEI HLAVRFTCSS
501: LLNMMYMYSM PLLPKMHYLH PLTVSQLDNL RHQATQIVST RLTRAEPPLR KEVVEYMLDV GSHMWSMRRS KANFFRIMGV LSGIIAVGKW FEQICVWKNP
601: ITTVLIHILF IILVIYPELI LPTIFLYLFL IGVWYYRWRP RHPPHMDTRL SHADSAHPDE LDEEFDTFPT SRPSDIVRMR YDRLRSIAGR IQTVVGDLAT
701: QGERFQSLLS WRDPRATALF VLFCLIAAVI LYITPFQVVA FAIGLYVLRH PRLRYKLPSV PLNFFRRLPA RTDCML

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8H3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.