Factsheet for GSMUA_Achr1P16550_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81021	Canola	cytosol	38.71	45.99
CDY70344	Canola	cytosol	61.29	41.47
GSMUA_Achr9P27720_001	Banana	mitochondrion	56.89	39.67
GSMUA_Achr9P12510_001	Banana	cytosol	43.99	37.04
GSMUA_Achr1P09320_001	Banana	cytosol	62.46	36.35
HORVU7Hr1G094580.2	Barley	cytosol	78.89	32.97
EER90045	Sorghum	cytosol	78.59	32.96
Os06t0614000-01	Rice	cytosol	78.89	32.65
VIT_08s0007g06140.t01	Wine grape	cytosol	75.95	32.62
TraesCS7A01G403500.1	Wheat	cytosol	77.71	32.6
PGSC0003DMT400046026	Potato	cytosol	75.37	32.49
Solyc03g077920.1.1	Tomato	cytosol	74.78	32.32
TraesCS7B01G302900.1	Wheat	cytosol	76.83	32.27
TraesCS7D01G396900.1	Wheat	cytosol	76.83	32.19
AT5G06850.1	Thale cress	cytosol	74.49	31.99
KRH71900	Soybean	endoplasmic reticulum	74.49	31.91
GSMUA_Achr1P00330_001	Banana	cytosol	42.23	31.79
Bra005915.1-P	Field mustard	cytosol	73.9	31.78
KRH32998	Soybean	cytosol	73.9	31.62
PGSC0003DMT400030931	Potato	mitochondrion	15.84	30.68
Zm00001d036804_P001	Maize	cytosol	60.41	30.47
GSMUA_Achr2P03960_001	Banana	cytosol	59.82	29.23
GSMUA_Achr3P11130_001	Banana	cytosol	58.94	28.03
GSMUA_AchrUn_...	Banana	cytosol	47.51	27.6
TraesCS2D01G333300.1	Wheat	cytosol	63.64	26.4
TraesCS2A01G329400.1	Wheat	cytosol	63.64	26.3
Os04t0472900-01	Rice	cytosol	64.22	25.61
GSMUA_Achr1P06800_001	Banana	cytosol	48.68	24.74
Zm00001d003321_P001	Maize	cytosol	61.29	24.22
KXG26530	Sorghum	cytosol	61.29	24.08
GSMUA_Achr3P22190_001	Banana	cytosol	59.82	23.83
GSMUA_Achr10P...	Banana	cytosol	53.96	23.26
GSMUA_Achr3P14580_001	Banana	cytosol	45.16	21.72
GSMUA_Achr5P01190_001	Banana	cytosol	37.54	21.05
GSMUA_AchrUn_...	Banana	cytosol	56.89	20.68
TraesCS2B01G352900.1	Wheat	mitochondrion	49.85	19.79
GSMUA_Achr10P...	Banana	mitochondrion	25.81	18.8
GSMUA_Achr10P...	Banana	cytosol	27.57	18.5
GSMUA_Achr8P04150_001	Banana	cytosol	25.22	17.62
GSMUA_Achr1P14480_001	Banana	cytosol	41.94	17.52
HORVU2Hr1G082010.3	Barley	cytosol	40.18	14.29
GSMUA_Achr9P10500_001	Banana	cytosol	25.81	13.62
CDX81020	Canola	cytosol	14.66	12.53
GSMUA_Achr3P03790_001	Banana	cytosol	2.93	7.63
GSMUA_Achr10P...	Banana	mitochondrion	1.76	2.49
TraesCS7B01G481700.1	Wheat	cytosol	0.59	1.59
VIT_04s0023g03270.t01	Wine grape	plasma membrane	0.59	1.2
GSMUA_Achr1P16560_001	Banana	endoplasmic reticulum, plasma membrane	0.59	0.75
VIT_02s0087g00450.t01	Wine grape	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr1P16550_001	EnsemblPlants:GSMUA_Achr1T16550_001	EnsemblPlantsGene:GSMUA_Achr1G16550_001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR10024	PANTHER:PTHR10024:SF201	PFAM:PF00168	PFscan:PS50004
SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI00029570E8	UniProt:M0S0G3	MapMan:35.1	:

Description

Putative Ras GTPase-activating protein 4 [Source:GMGC_GENE;Acc:GSMUA_Achr1G16550_001]

Coordinates

chr1:+:12347624..12348959

Molecular Weight (calculated)

39351.4 Da

IEP (calculated)

6.519

GRAVY (calculated)

-0.323

Length

341 amino acids

Sequence
(BLAST)

001: MYYLYVRVVK AKDLLSNPIT MNCDPYIEVK LGNYRGTTRH FDKKTNPEWN QVFAFSKERI QSSLLEIFVK DKEMVGRDDY LGKVVFDLNE VPTRVPPDSP
101: LAPQWYRLED RRGEGKVRGE VMLAVWVYVS PKLWYLRVNV IEAQDVQPNV RGRAPEVFVK AQVGNQVLKT KICQTATLNP LWNEDLIFVV AEPFEEQLAL
201: TVEDRLRFSS RIHLRVCLEG AYHVMDESTM YISDQQPTAR QLWKPPVGIL EVGILGANEL LPMKMREGRG ATDAYCVAKY GQKWIRTRTM VGTFAPTWNE
301: QYTWEVFDPS TVITIGVFDN CHLESDSQHL KPTDCIDIHT P

Best Arabidopsis Sequence Match ( AT3G57880.2 )
(BLAST)

001: MQRPPPEDFS LKETRPHLGG GKLSGDKLTS TYDLVEQMQY LYVRVVKAKE LPGKDMTGSC DPYVEVKLGN YKGTTRHFEK KSNPEWNQVF AFSKDRIQAS
101: FLEATVKDKD FVKDDLIGRV VFDLNEVPKR VPPDSPLAPQ WYRLEDRKGD KVKGELMLAV WFGTQADEAF PEAWHSDAAT VSGTDALANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPTDKQR YPEVYVKAIV GNQALRTRVS QSRTINPMWN EDLMFVAAEP FEEPLILSVE DRVAPNKDEV LGRCAIPLQY LDRRFDHKPV
301: NSRWYNLEKH IMVDGEKKET KFASRIHMRI CLEGGYHVLD ESTHYSSDLR PTAKQLWKPN IGVLELGILN ATGLMPMKTK DGRGTTDAYC VAKYGQKWIR
401: TRTIIDSFTP RWNEQYTWEV FDPCTVVTVG VFDNCHLHGG EKIGGAKDSR IGKVRIRLST LETDRVYTHS YPLLVLHPNG VKKMGEIHLA VRFTCSSLLN
501: MMYMYSQPLL PKMHYIHPLT VSQLDNLRHQ ATQIVSMRLT RAEPPLRKEV VEYMLDVGSH MWSMRRSKAN FFRIMGVLSG LIAVGKWFEQ ICNWKNPITT
601: VLIHLLFIIL VLYPELILPT IFLYLFLIGI WYYRWRPRHP PHMDTRLSHA DSAHPDELDE EFDTFPTSRP SDIVRMRYDR LRSIAGRIQT VVGDLATQGE
701: RLQSLLSWRD PRATALFVLF CLIAAVILYV TPFQVVALCI GIYALRHPRF RYKLPSVPLN FFRRLPARTD CML

Arabidopsis Description

Anthranilate phosphoribosyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M2R0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.