Factsheet for GSMUA_Achr9P10500_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P12510_001	Banana	cytosol	22.29	35.56
GSMUA_Achr10P...	Banana	cytosol	27.55	35.04
GSMUA_Achr8P04150_001	Banana	cytosol	25.08	33.2
GSMUA_Achr5P01190_001	Banana	cytosol	29.88	31.74
GSMUA_AchrUn_...	Banana	cytosol	26.63	29.3
TraesCS5D01G484400.1	Wheat	cytosol	45.98	28.61
TraesCS5A01G471900.1	Wheat	cytosol	45.98	28.61
TraesCS5B01G484400.1	Wheat	cytosol	45.51	28.43
GSMUA_Achr3P11130_001	Banana	cytosol	31.42	28.31
GSMUA_Achr1P00330_001	Banana	cytosol	19.5	27.81
OQU88487	Sorghum	cytosol	46.28	27.71
Zm00001d018871_P001	Maize	cytosol	45.82	27.66
GSMUA_Achr1P14480_001	Banana	cytosol	34.37	27.21
GSMUA_Achr10P...	Banana	mitochondrion	19.66	27.14
PGSC0003DMT400045958	Potato	cytosol	41.33	26.83
Solyc01g065500.2.1	Tomato	cytosol	40.87	26.61
PGSC0003DMT400088288	Potato	cytosol	40.87	26.19
GSMUA_Achr3P14580_001	Banana	cytosol	28.48	25.95
GSMUA_Achr1P16550_001	Banana	cytosol	13.62	25.81
GSMUA_Achr9P27720_001	Banana	mitochondrion	19.5	25.77
Os07t0165100-01	Rice	cytosol, endoplasmic reticulum, peroxisome	32.2	25.43
GSMUA_Achr1P06800_001	Banana	cytosol	26.32	25.34
KRH17620	Soybean	cytosol	39.32	25.17
CDY25472	Canola	cytosol	38.54	24.88
CDY38472	Canola	cytosol	38.54	24.83
Bra002118.1-P	Field mustard	cytosol	38.7	23.81
GSMUA_Achr10P...	Banana	cytosol	28.95	23.64
AT5G17980.1	Thale cress	cytosol	38.24	23.55
GSMUA_Achr2P03960_001	Banana	cytosol	24.92	23.07
GSMUA_Achr1P09320_001	Banana	cytosol	20.59	22.7
GSMUA_Achr3P22190_001	Banana	cytosol	29.26	22.08
GSMUA_AchrUn_...	Banana	cytosol	30.8	21.22
GSMUA_Achr10P...	Banana	mitochondrion	7.43	19.92
GSMUA_Achr1P16560_001	Banana	endoplasmic reticulum, plasma membrane	8.05	19.62
CDY33906	Canola	nucleus	6.81	18.26
Bra020640.1-P	Field mustard	cytosol	6.81	17.12
GSMUA_Achr3P03790_001	Banana	cytosol	2.63	12.98

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr9G10500_001	EnsemblPlants:GSMUA_Achr9P10500_001	EnsemblPlants:GSMUA_Achr9T10500_001	InterPro:IPR000008	InterPro:IPR035892
UniProt:M0TZ59	PFAM:PF00168	PFAM:PF08372	InterPro:PRibTrfase_C	PFscan:PS50004	PANTHER:PTHR10024
PANTHER:PTHR10024:SF271	SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI000296B924	SEG:seg

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G10500_001]

Coordinates

chr9:-:6847912..6851491

Molecular Weight (calculated)

72933.1 Da

IEP (calculated)

9.470

GRAVY (calculated)

-0.339

Length

646 amino acids

Sequence
(BLAST)

001: MASMARKLVV EVMEAHDLLP KDGMGTSSPY VVVDFDGQRR KTQTVLRNLS PTWNEALEFN VIGPVDDAGE PVEVEVYHDR RVGPSRRNNF LGRVRIDSRK
101: VVKKGEEAVE SFPVEKKSFF SWVRGDIYLK VYYVDEPAVN MDAGKTEAPK PKESDAPPPK ESTPNWYDLV DKMQYLFVRV VRARKLPGNA KPHVRVAAYG
201: RHVSTRTARR SVFFEWNQTF AFVRDASAAA ADPSALEISV PLRDPPDSPL APQWYRLEGG RGRGGDLMLA SWDTVTSSIK EHAVYVRAAL GFQVLKTRNA
301: VSRNGAPPSW NEDLLFVEAE PFGEDQKLVI SLELRHGKDA IVLGSGSILL STIERRGTTD AYAVAKYGPK SEPSLQREVA LWVLDPAAEP RGYSMRRVRA
401: NWYRIVAALS WVADVARWVE DTRAWRNATT TLLAVEREEL DEEFDPVPSA RGPEVVRARY DRMRGECSWL CASCWRWHCT SCRRGWRWWR RGSTTCGIPC
501: SGTACRQRPS TSTAACRRWL TGSYERGCRW EAGPKHCSSS STSRFLGGLS LCCHPGLAST ASLLFQLVRK GDVVNDLKVD FSKCNGAIED MIASIAVSKI
601: YWRIIQHFLL ILFNSCILVS LRYYLLNSMN YKISSRKSLY SIKIFY

Best Arabidopsis Sequence Match ( AT5G17980.1 )
(BLAST)

0001: MATTRKLVVE VVDAKDLTPK DGHGTSSPYV VLDYYGQRRR TRTIVRDLNP VWNETLEFSL AKRPSHQLFT DVLELDMYHD KNFGQTRRNN FLGRIRLGSD
0101: QFVGQGEEAL IYYPLEKKSL FNLVQGEIGL RVYYADEKPP PLKPTVAPLE TVVEEKTEET KAEGPDESKP PPETNDIPAE VKETVKPPQP PPEESSPAEG
0201: PKPDEEASPP LQENATVGGE EPPASESDKN EAEAKPVEEP PQNQPDGEDI VLESEDTMSW ASAPRSPLPE VIISRSVSGS IPETKNGPQP LRRSVSETAS
0301: YTSEISDVST IERSTFDLVE KMHYVFIRVV KARSLPTSGS PVTKISLSGT MIQSKPARKT SCFEWDQTFA FLRDSPDLSS SPILEISVWD SSTGIETSQF
0401: LGGICFDVSE IPLRDPPDSP LAPQWYRLEG GGAHNSDLML ATWTGTQADE SFPDAWKTDT AGNVTARAKV YMSSKLWYLR ATVIEAQDLL PPQLTAFKEA
0501: SFQLKAQLGS QVQKTKSAVT RNGAPSWNED LLFVAAEPFS DQLVFTLEYR TSKGPVTVGM ARVPLSAIER RVDDRLVASR WLGLEDPNDE KRGNRSRVHI
0601: RLCFDGGYHV MDEAAHVCSD YRPTARQLWK PAVGIVELGI IGCKNLLPMK TVNGKGSTDA YTVAKYGSKW VRTRTVSDSL DPKWNEQYTW KVYDPCTVLT
0701: IGVFDSWGVY EVDGGKEATR QDLRIGKVRI RISTLETGKA YRNTYPLLML VNGGVKKLGE IELAVRFVRT APPLDFLHVY TQPLLPLMHH IKPLSLFQED
0801: MLRNTAVKIL AAHLSRSEPP LRPEIVRYML DADTHTFSMR KVRANWLRIV NVVAGMVDVV RWVDDTRFWK NPTSTLLVHA LVVMLIWFPD LIVPTLAFYL
0901: FVIGAWNYRF RSRAALPHFD PRLSLADAAD RDELDEEFDV VPSNRPPEMV RLRYDKLRNV GARVQTILGE VAAQGEKMQA LVTWRDPRAT GIFVGLCFFV
1001: ALVLYLVPTK MVAMASGFYY FRHPIFRDRK PSPVLNFFRR LPSLSDRLM

Arabidopsis Description

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FJG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.