Factsheet for Bra002118.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38472	Canola	cytosol	93.24	97.61
AT5G17980.1	Thale cress	cytosol	88.57	88.66
Solyc01g065500.2.1	Tomato	cytosol	61.71	65.32
PGSC0003DMT400045958	Potato	cytosol	61.62	65.03
PGSC0003DMT400088288	Potato	cytosol	61.62	64.19
KRH17620	Soybean	cytosol	60.57	63.03
Os07t0165100-01	Rice	cytosol, endoplasmic reticulum, peroxisome	40.86	52.45
TraesCS5D01G484400.1	Wheat	cytosol	50.38	50.96
TraesCS5A01G471900.1	Wheat	cytosol	50.29	50.87
TraesCS5B01G484400.1	Wheat	cytosol	49.71	50.48
Zm00001d018871_P001	Maize	cytosol	50.1	49.16
Bra036444.1-P	Field mustard	plasma membrane	13.62	49.14
OQU88487	Sorghum	cytosol	50.29	48.93
Bra006172.1-P	Field mustard	cytosol	35.71	48.76
Bra008867.1-P	Field mustard	cytosol	35.24	48.11
Bra014601.1-P	Field mustard	cytosol	35.24	47.56
Bra003302.1-P	Field mustard	cytosol	34.95	47.42
Bra003788.1-P	Field mustard	cytosol	46.67	46.76
Bra005915.1-P	Field mustard	cytosol	34.95	46.28
Bra027570.1-P	Field mustard	cytosol	30.95	42.76
Bra036443.1-P	Field mustard	cytosol	41.05	42.13
Bra035212.1-P	Field mustard	cytosol	39.62	41.11
Bra032527.1-P	Field mustard	cytosol	38.29	40.81
Bra024523.1-P	Field mustard	cytosol	39.05	40.35
Bra037512.1-P	Field mustard	cytosol	40.76	40.23
Bra000963.1-P	Field mustard	cytosol	37.14	40.12
Bra008528.1-P	Field mustard	cytosol	37.43	39.5
GSMUA_Achr9P10500_001	Banana	cytosol	23.81	38.7
Bra007594.1-P	Field mustard	cytosol	36.0	38.03
Bra034266.1-P	Field mustard	cytosol	21.24	31.15
Bra007628.1-P	Field mustard	cytosol	22.76	29.73
Bra020640.1-P	Field mustard	cytosol	7.24	29.57
Bra024522.1-P	Field mustard	cytosol	5.62	27.44
Bra014445.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	34.67	25.12

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	EnsemblPlantsGene:Bra002118	EnsemblPlants:Bra002118.1	EnsemblPlants:Bra002118.1-P	InterPro:C2_dom
InterPro:C2_domain_sf	ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005886	GO:GO:0009506	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000008
InterPro:IPR035892	UniProt:M4CD37	PFAM:PF00168	PFAM:PF08372	InterPro:PRibTrfase_C	PFscan:PS50004
PANTHER:PTHR10024	PANTHER:PTHR10024:SF271	SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI0002543B36
SEG:seg	:	:	:	:	:

Description

AT5G17980 (E=0.0) | C2 domain-containing protein

Coordinates

chrA10:-:11350488..11353640

Molecular Weight (calculated)

117573.0 Da

IEP (calculated)

6.674

GRAVY (calculated)

-0.302

Length

1050 amino acids

Sequence
(BLAST)

0001: MATTRKLVVE IVDAKDLTPK DGQGTSSPYV VVDYYGQRRR TRTIVRDLNP VWNESLEFSL AKKPSHPVFN DVLEIDMFHD KNFGPTRRNN FLGRIRLGSD
0101: QFVAKGEEAL IYFPLEKKSL FNLVQGEIGI RIYYAEEAAP PASKPAVAPL EPVVEEKEEE VKTEGPDESK PPLETSAVPA EVKETAEPPP PPENSPAEAP
0201: KPNEEASPAS TENATVAGEE PPVPEPNLPP EPMADPKLPA EEPPQNQPES DDILLETTDA ESWVSAPRSP LPGVTISRSI SGSIPKTKTG GPQPLPRSLS
0301: ETASYTSEIS DVSTIERSTF DLVEKMHYVF VRVVKARSLP TSGTPITKIS LSGTTIESKP ARKTSTFEWD QTFAFLRDSP DTSSSPILEI SVWEGSGGTH
0401: FLGGICFDVS EIPLRDPPDS PLAPQWYRLE GGGAHHGDLM LATWTGTQAD ESFPDAWKTD TAGNVTARAK VYMSPKLWYL RATVMDAKDL LPPQLTVFKE
0501: ASFQLKAQLG FQVQKTKPAV TRNGAPSWNE DLLFVAAEPF ADQLVFTLEY RTSKGPVTVG MARVPLTAIE RRVDERLVAS RWFSFDDPND EKRGNRSRVH
0601: LRLCFDGGYH VMDEAAHVCS DYRPTARQLW KPAVGIVELG VIGCKNLLPM KTVNGKGSTD AYTVAKYGSK WVRTRTVSDS LDPKWNEQYT WKVYDPCTVL
0701: TIGVFDSWGV YEIDGGKEST RQDLRIGKVR IRISTLETGK AYRNTYPLLM LVNGGVKKLG EIELAVRFVR SAPPLDFLHV YTQPLLPLMH HIKPLTLFQE
0801: DMLRNTAVKI LAVHLSRSEP PLRPEIVRYM LDADSHTFSM RKVRANWLRI VNVVAGMIDV VRWVDDTRFW RNPTATLLVH ALVVMLIWFP DLIVPTIAFY
0901: LFVIGAWNYR FRSRAALPHF DPRLSLADAA DREELDEEFD VVPSNRPPEM VRSRYDKLRA VGARVQTILG EVAAQGEKMQ ALVTWRDPRA TGIFVGLCLV
1001: VALVLYLVPT KMVAMASGFY YFRHPIFRDR KPSPMINFFR RLPSLSDRLM

Best Arabidopsis Sequence Match ( AT5G17980.1 )
(BLAST)

0001: MATTRKLVVE VVDAKDLTPK DGHGTSSPYV VLDYYGQRRR TRTIVRDLNP VWNETLEFSL AKRPSHQLFT DVLELDMYHD KNFGQTRRNN FLGRIRLGSD
0101: QFVGQGEEAL IYYPLEKKSL FNLVQGEIGL RVYYADEKPP PLKPTVAPLE TVVEEKTEET KAEGPDESKP PPETNDIPAE VKETVKPPQP PPEESSPAEG
0201: PKPDEEASPP LQENATVGGE EPPASESDKN EAEAKPVEEP PQNQPDGEDI VLESEDTMSW ASAPRSPLPE VIISRSVSGS IPETKNGPQP LRRSVSETAS
0301: YTSEISDVST IERSTFDLVE KMHYVFIRVV KARSLPTSGS PVTKISLSGT MIQSKPARKT SCFEWDQTFA FLRDSPDLSS SPILEISVWD SSTGIETSQF
0401: LGGICFDVSE IPLRDPPDSP LAPQWYRLEG GGAHNSDLML ATWTGTQADE SFPDAWKTDT AGNVTARAKV YMSSKLWYLR ATVIEAQDLL PPQLTAFKEA
0501: SFQLKAQLGS QVQKTKSAVT RNGAPSWNED LLFVAAEPFS DQLVFTLEYR TSKGPVTVGM ARVPLSAIER RVDDRLVASR WLGLEDPNDE KRGNRSRVHI
0601: RLCFDGGYHV MDEAAHVCSD YRPTARQLWK PAVGIVELGI IGCKNLLPMK TVNGKGSTDA YTVAKYGSKW VRTRTVSDSL DPKWNEQYTW KVYDPCTVLT
0701: IGVFDSWGVY EVDGGKEATR QDLRIGKVRI RISTLETGKA YRNTYPLLML VNGGVKKLGE IELAVRFVRT APPLDFLHVY TQPLLPLMHH IKPLSLFQED
0801: MLRNTAVKIL AAHLSRSEPP LRPEIVRYML DADTHTFSMR KVRANWLRIV NVVAGMVDVV RWVDDTRFWK NPTSTLLVHA LVVMLIWFPD LIVPTLAFYL
0901: FVIGAWNYRF RSRAALPHFD PRLSLADAAD RDELDEEFDV VPSNRPPEMV RLRYDKLRNV GARVQTILGE VAAQGEKMQA LVTWRDPRAT GIFVGLCFFV
1001: ALVLYLVPTK MVAMASGFYY FRHPIFRDRK PSPVLNFFRR LPSLSDRLM

Arabidopsis Description

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FJG3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.