CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020640.1-P	Field mustard	cytosol	97.1	91.05
CDX80993	Canola	extracellular	10.79	29.21
CDY69710	Canola	cytosol	70.12	21.69
CDX67712	Canola	cytosol	66.81	20.8
CDX98254	Canola	cytosol	65.56	20.41
CDY47660	Canola	endoplasmic reticulum	69.71	20.29
CDY49185	Canola	cytosol	25.73	18.45
CDY68091	Canola	cytosol	58.51	18.34
CDX97214	Canola	cytosol	58.51	18.34
CDX70485	Canola	cytosol	57.68	18.08
CDX78498	Canola	cytosol	57.26	17.95
CDY35343	Canola	golgi	20.75	17.86
CDX81021	Canola	cytosol	21.16	17.77
CDY13087	Canola	cytosol	27.39	14.41
CDX86328	Canola	cytosol	46.06	10.89
CDX71747	Canola	cytosol	33.2	10.54
CDY57334	Canola	cytosol	19.09	10.41
CDX77002	Canola	cytosol, peroxisome, plasma membrane	24.9	10.14
CDY70344	Canola	cytosol	21.16	10.12
CDX86768	Canola	cytosol	41.08	9.8
CDY04800	Canola	cytosol	40.66	9.73
CDY01973	Canola	cytosol	39.83	9.69
CDY21373	Canola	cytosol	40.66	9.66
CDX74344	Canola	cytosol	39.0	9.66
CDY10076	Canola	cytosol, nucleus, plasma membrane	39.0	9.64
CDY54062	Canola	cytosol	39.42	9.55
CDY32530	Canola	cytosol	38.59	9.4
CDX91899	Canola	cytosol	37.76	9.3
Os07t0165100-01	Rice	cytosol, endoplasmic reticulum, peroxisome	29.46	8.68
CDY48929	Canola	cytosol	33.61	8.22
CDX89108	Canola	cytosol	30.71	8.05
CDX85853	Canola	cytosol	33.2	7.66
CDX68168	Canola	cytosol	33.2	7.66
CDX71710	Canola	cytosol	24.07	7.6
CDY29951	Canola	cytosol	31.95	7.54
CDY21171	Canola	cytosol	31.54	7.47
CDY25472	Canola	cytosol	30.29	7.29
CDY38472	Canola	cytosol	30.29	7.28
CDY11377	Canola	cytosol	23.24	6.97
GSMUA_Achr9P10500_001	Banana	cytosol	18.26	6.81
TraesCS5D01G484400.1	Wheat	cytosol	29.05	6.74
Zm00001d018871_P001	Maize	cytosol	29.88	6.73
TraesCS5B01G484400.1	Wheat	cytosol	28.63	6.67
TraesCS5A01G471900.1	Wheat	cytosol	28.63	6.65
OQU88487	Sorghum	cytosol	29.46	6.58
CDY13273	Canola	cytosol	9.13	4.76
CDY35342	Canola	cytosol, peroxisome, plasma membrane	3.73	1.85
CDX98964	Canola	endoplasmic reticulum, extracellular	0.41	0.71
CDX71748	Canola	cytosol	0.0	0.0
CDY42494	Canola	cytosol, plasma membrane	0.0	0.0
CDX80994	Canola	cytosol	0.0	0.0
CDX81020	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.60.40.150	Gene3D:3.30.70.330	MapMan:35.1	GO:A0A078H7R2	UniProt:A0A078H7R2	InterPro:C2_dom
InterPro:C2_domain_sf	EnsemblPlants:CDY33906	ProteinID:CDY33906	ProteinID:CDY33906.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	EnsemblPlantsGene:GSBRNA2T00055414001	InterPro:IPR000008	InterPro:IPR012677	InterPro:IPR035892	InterPro:Nucleotide-bd_a/b_plait_sf
PFAM:PF00168	PFscan:PS50004	PANTHER:PTHR10024	PANTHER:PTHR10024:SF243	InterPro:RBD_domain_sf	SMART:SM00239
SUPFAM:SSF49562	SUPFAM:SSF54928	UniParc:UPI0004EE6553	SEG:seg	:	:

Description

BnaA02g30810DBnaA02g30810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H7R2]

Coordinates

chrLK032324:+:195712..197616

Molecular Weight (calculated)

26869.0 Da

IEP (calculated)

9.598

GRAVY (calculated)

-0.565

Length

241 amino acids

Sequence
(BLAST)

001: MMRDVIDEMN GKELDGRTIT VNESQSRGSG GGGGRGGGGR GGGGYSGRGG GDGQSTLISL ERSMANPSDS YLHMAWHSDA ATVSGTDALA NIRSKVYLSP
101: KLWYLRVNVI EAQDLIPSDK GRYPEVYVKA IVGNQALRTR VSQSRTINPM WNKDLMFVAA EPFEEPLILS VEDRVAPNKD EVLGRCAIPL QHLDRRFDHR
201: PVNSRWFNLE KHIMVDGEKK EIKFTSRIHM RIFHVHKAQN H

Best Arabidopsis Sequence Match ( AT1G51570.1 )
(BLAST)

001: MQRPPPEDFS LKETKPHLGG GKVTGDKLTT TYDLVEQMQY LYVRVVKAKE LPGKDLTGSC DPYVEVKLGN YRGTTRHFEK KSNPEWNQVF AFSKDRVQAS
101: YLEATVKDKD LVKDDLIGRV VFDLNEIPKR VPPDSPLAPQ WYRLEDGKGQ KVKGELMLAV WFGTQADEAF PEAWHSDAAT VSGTDALANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPSDKGR YPEVFVKVIM GNQALRTRVS QSRSINPMWN EDLMFVVAEP FEEPLILSVE DRVAPNKDEV LGRCAVPLQY LDKRFDYRPV
301: NSRWFNLEKH VIMEGGEKKE IKFASKIHMR ICLEGGYHVL DESTHYSSDL RPTAKQLWKP NIGVLELGVL NATGLMPMKA KEGGRGTTDA YCVAKYGQKW
401: IRTRTIIDSF TPRWNEQYTW EVFDPCTVVT VGVFDNCHLH GGDKNNGGGK DSRIGKVRIR LSTLEADRVY THSYPLLVLH PSGVKKMGEI HLAVRFTCSS
501: LLNMMYMYSM PLLPKMHYLH PLTVSQLDNL RHQATQIVST RLTRAEPPLR KEVVEYMLDV GSHMWSMRRS KANFFRIMGV LSGIIAVGKW FEQICVWKNP
601: ITTVLIHILF IILVIYPELI LPTIFLYLFL IGVWYYRWRP RHPPHMDTRL SHADSAHPDE LDEEFDTFPT SRPSDIVRMR YDRLRSIAGR IQTVVGDLAT
701: QGERFQSLLS WRDPRATALF VLFCLIAAVI LYITPFQVVA FAIGLYVLRH PRLRYKLPSV PLNFFRRLPA RTDCML

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8H3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.