CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81020	Canola	cytosol	53.1	55.89
KRH65054	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	30.95	52.42
CDX98964	Canola	endoplasmic reticulum, extracellular	16.67	49.65
CDX71747	Canola	cytosol	89.52	49.54
CDX89108	Canola	cytosol	97.86	44.72
CDX80994	Canola	cytosol	10.0	40.78
CDY48929	Canola	cytosol	88.81	37.83
AT3G61300.1	Thale cress	cytosol	83.33	36.01
CDY35342	Canola	cytosol, peroxisome, plasma membrane	37.62	32.51
CDX98254	Canola	cytosol	59.05	32.04
CDX67712	Canola	cytosol	58.81	31.91
CDY69710	Canola	cytosol	59.05	31.84
CDX97214	Canola	cytosol	57.38	31.34
GSMUA_Achr3P03790_001	Banana	cytosol	9.76	31.3
CDY68091	Canola	cytosol	57.14	31.21
CDX78498	Canola	cytosol	56.9	31.08
CDX70485	Canola	cytosol	56.9	31.08
CDY47660	Canola	endoplasmic reticulum	59.05	29.95
VIT_15s0046g03030.t01	Wine grape	cytosol	64.29	26.52
PGSC0003DMT400000108	Potato	cytosol	61.67	25.67
Solyc01g094410.2.1	Tomato	nucleus	61.43	25.57
CDX74344	Canola	cytosol	58.57	25.28
CDY01973	Canola	cytosol	59.29	25.13
CDY54062	Canola	cytosol	59.52	25.13
CDX91899	Canola	cytosol	58.33	25.05
KRH48167	Soybean	endoplasmic reticulum, nucleus	59.29	24.85
KRH65087	Soybean	endoplasmic reticulum, mitochondrion, nucleus	59.29	24.83
CDX86768	Canola	cytosol	58.57	24.36
EER99386	Sorghum	cytosol	58.33	24.35
Os07t0483500-01	Rice	cytosol	58.57	24.33
CDY70344	Canola	cytosol	29.05	24.21
KRH40482	Soybean	cytosol	58.1	24.02
Zm00001d006371_P001	Maize	cytosol	57.86	24.01
Zm00001d021494_P001	Maize	cytosol	58.33	23.93
CDY10076	Canola	cytosol, nucleus, plasma membrane	55.48	23.9
CDY32530	Canola	cytosol	56.19	23.86
CDY49185	Canola	cytosol	19.05	23.81
CDY04800	Canola	cytosol	56.9	23.73
KRH00708	Soybean	cytosol	57.38	23.7
CDY21373	Canola	cytosol	56.9	23.57
TraesCS2D01G234800.1	Wheat	cytosol	57.86	23.46
TraesCS2B01G261000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	58.1	23.42
HORVU4Hr1G079830.2	Barley	plasma membrane	58.1	23.26
CDX86328	Canola	cytosol	55.71	22.96
TraesCS2A01G238900.1	Wheat	cytosol	57.86	22.88
GSMUA_Achr1P00330_001	Banana	cytosol	23.33	21.63
CDX85853	Canola	cytosol	52.38	21.07
CDX68168	Canola	cytosol	52.38	21.05
CDY21171	Canola	cytosol	49.05	20.26
CDY29951	Canola	cytosol	49.05	20.18
CDY38472	Canola	cytosol	47.62	19.94
CDY25472	Canola	cytosol	47.38	19.88
CDY57334	Canola	cytosol	19.29	18.33
CDX77002	Canola	cytosol, peroxisome, plasma membrane	25.48	18.07
GSMUA_AchrUn_...	Banana	cytosol	25.24	18.06
CDX71710	Canola	cytosol	31.9	17.56
CDY11377	Canola	cytosol	33.57	17.54
CDY13087	Canola	cytosol	19.05	17.47
CDX71748	Canola	cytosol	1.19	2.76
CDX81021	Canola	cytosol	1.67	2.44
CDY13273	Canola	cytosol	1.67	1.52
CDY35343	Canola	golgi	0.48	0.71
CDX80993	Canola	extracellular	0.0	0.0
CDY33906	Canola	nucleus	0.0	0.0

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	GO:A0A078HYU6	UniProt:A0A078HYU6	InterPro:C2_dom	InterPro:C2_domain_sf
EnsemblPlants:CDY42494	ProteinID:CDY42494	ProteinID:CDY42494.1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
EnsemblPlantsGene:GSBRNA2T00074931001	InterPro:IPR000008	InterPro:IPR035892	PFAM:PF00168	PFAM:PF08372	InterPro:PRibTrfase_C
PFscan:PS50004	PANTHER:PTHR31425	PANTHER:PTHR31425:SF4	SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix
UniParc:UPI0004EEBA70	SEG:seg	:	:	:	:

Description

BnaC04g21870DBnaC04g21870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HYU6]

Coordinates

chrLK032526:+:187210..188472

Molecular Weight (calculated)

48141.2 Da

IEP (calculated)

10.430

GRAVY (calculated)

-0.105

Length

420 amino acids

Sequence
(BLAST)

001: MKKVRNRHGQ SVGVLELGIL GAEGLSLSRD GKKETVDAYC VAKYGTKWVR TRTVMNSLNP RFNEQYTWEV YEPATVITIG VFDNNGTNGG NNKDGKIGKV
101: RVRISTLESG RLYTNSYPLL VLRPSGVKNM GELHLAIRFT CTSMFQMLLH YWKPLLPKMH YVRPLKVVQQ EILRRHAVNL MAARLSRAEP PLRKEVIEYI
201: TDSNSHFWSI RKSRANLYRL RSVFSGLLGT GEWFQDICTW KKPVASTAVH VLYLAFVCLP EMILPIISLW LFMLGVWNYR LRPRQPQHMD TSLSFADNVH
301: PEELTEEFDT FPFSSQDPGV VKMRYERLRS IAGRAQTLVG DIAGQGERVQ ALLSWRDPRA TSIFMVVCLV SSVVLYVVPF KVFVLLCGLY IMRHPRLRRK
401: TPPGLVNFFK RLPAKTDCML

Best Arabidopsis Sequence Match ( AT3G57880.4 )
(BLAST)

001: MQRPPPEDFS LKETRPHLGG GKLSGDKLTS TYDLVEQMQY LYVRVVKAKE LPGKDMTGSC DPYVEVKLGN YKGTTRHFEK KSNPEWNQVF AFSKDRIQAS
101: FLEATVKDKD FVKDDLIGRV VFDLNEVPKR VPPDSPLAPQ WYRLEDRKGD KVKGELMLAV WFGTQADEAF PEAWHSDAAT VSGTDALANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPTDKQR YPEVYVKAIV GNQALRTRVS QSRTINPMWN EDLMFVAAEP FEEPLILSVE DRVAPNKDEV LGRCAIPLQY LDRRFDHKPV
301: NSRWYNLEKH IMVDGEKKET KFASRIHMRI CLEGGYHVLD ESTHYSSDLR PTAKQLWKPN IGVLELGILN ATGLMPMKTK DGRGTTDAYC VAKYGQKWIR
401: TRTIIDSFTP RWNEQYTWEV FDPCTVVTVG VFDNCHLHGG EKIGGAKDSR IGKVRIRLST LETDRVYTHS YPLLVLHPNG VKKMGEIHLA VRFTCSSLLN
501: MMYMYSQPLL PKMHYIHPLT VSQLDNLRHQ ATQIVSMRLT RAEPPLRKEV VEYMLDVGSH MWSMRRSKAN FFRIMGVLSG LIAVGKWFEQ ICNWKNPITT
601: VLIHLLFIIL VLYPELILPT IFLYLFLIGI WYYRWRPRHP PHMDTRLSHA DSAHPDELDE EFDTFPTSRP SDIVRMRYDR LRSIAGRIQT VVGDLATQGE
701: RLQSLLSWRD PRATALFVLF CLIAAVILYV TPFQVVALCI GIYALRHPRF RYKLPSVPLN FFRRLPARTD CML

Arabidopsis Description

Anthranilate phosphoribosyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M2R0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.