CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70344	Canola	cytosol	77.67	15.87
CDX81020	Canola	cytosol	51.46	13.28
CDY35342	Canola	cytosol, peroxisome, plasma membrane	49.51	10.49
CDY42494	Canola	cytosol, plasma membrane	40.78	10.0
CDX77002	Canola	cytosol, peroxisome, plasma membrane	49.51	8.61
CDX70485	Canola	cytosol	60.19	8.06
CDX78498	Canola	cytosol	60.19	8.06
CDX98254	Canola	cytosol	60.19	8.01
CDX67712	Canola	cytosol	60.19	8.01
CDY69710	Canola	cytosol	60.19	7.96
CDY68091	Canola	cytosol	59.22	7.93
CDX97214	Canola	cytosol	59.22	7.93
CDY47660	Canola	endoplasmic reticulum	61.16	7.61
CDY57334	Canola	cytosol	32.04	7.47
CDY13087	Canola	cytosol	32.04	7.21
CDX71747	Canola	cytosol	49.51	6.72
CDX86328	Canola	cytosol	64.08	6.48
CDX71710	Canola	cytosol	45.63	6.16
CDY10076	Canola	cytosol, nucleus, plasma membrane	56.31	5.95
CDY11377	Canola	cytosol	45.63	5.85
CDY32530	Canola	cytosol	55.34	5.76
CDY21373	Canola	cytosol	55.34	5.62
CDY04800	Canola	cytosol	54.37	5.56
CDY01973	Canola	cytosol	53.4	5.55
CDX86768	Canola	cytosol	54.37	5.54
CDY54062	Canola	cytosol	53.4	5.53
CDX85853	Canola	cytosol	55.34	5.46
CDX68168	Canola	cytosol	55.34	5.45
CDX89108	Canola	cytosol	48.54	5.44
CDY48929	Canola	cytosol	50.49	5.27
CDY21171	Canola	cytosol	51.46	5.21
CDY29951	Canola	cytosol	51.46	5.19
HORVU7Hr1G110440.4	Barley	cytosol, plastid	54.37	5.17
CDX74344	Canola	cytosol	48.54	5.14
CDX91899	Canola	cytosol	48.54	5.11
EES03181	Sorghum	cytosol	53.4	5.09
Zm00001d011239_P001	Maize	cytosol, mitochondrion, plasma membrane	53.4	5.07
TraesCS7B01G397000.1	Wheat	cytosol	53.4	5.07
TraesCS7D01G478500.1	Wheat	cytosol	53.4	5.07
CDY25472	Canola	cytosol	48.54	5.0
CDY38472	Canola	cytosol	48.54	4.99
TraesCS7A01G491900.1	Wheat	cytosol	52.43	4.98
Os01t0587300-00	Rice	cytosol	51.46	4.91
CDY49185	Canola	cytosol	12.62	3.87
CDX98964	Canola	endoplasmic reticulum, extracellular	4.85	3.55
CDX81021	Canola	cytosol	3.88	1.39
GSMUA_Achr10P...	Banana	mitochondrion	1.94	0.83
CDY13273	Canola	cytosol	2.91	0.65
CDX80993	Canola	extracellular	0.0	0.0
CDX71748	Canola	cytosol	0.0	0.0
CDY35343	Canola	golgi	0.0	0.0
CDY33906	Canola	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:CDX80994	EnsemblPlantsGene:GSBRNA2T00134424001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR10024	PANTHER:PTHR10024:SF236	PFAM:PF00168	PFscan:PS50004	ProteinID:CDX80994
ProteinID:CDX80994.1	SUPFAM:SSF49562	UniParc:UPI0004EEDD32	MapMan:35.1	:	:

Description

BnaC03g02480D

Coordinates

chrLK031823:+:1185354..1185665

Molecular Weight (calculated)

11796.0 Da

IEP (calculated)

4.815

GRAVY (calculated)

-0.633

Length

103 amino acids

Sequence
(BLAST)

001: MDESTLYISD VRPTPRQVWK KPIGSLSAQG LSPMKTKDCK ETTDPYCVAK YEVKSGSGTR TITESFSPKW NEQYMWEVYD PCTVITLGVF DNCQTMEQKL
101: IQE

Best Arabidopsis Sequence Match ( AT5G06850.1 )
(BLAST)

001: MAAKDGAKSQ EDYKLKDMKP ELGERWPHGG QRGGTGWIGS ERAASTYDLV EQMFYLYVRV VKAKDLPPNP VTSNCDPYVE VKIGNYKGKT KHFEKRTNPE
101: WNQVFAFSKD KVQSSTVEVF VRDKEMVTRD EYIGKVVFDM REVPTRVPPD SPLAPQWYRL EDRRGESKKR GEVMVAVWLG TQADEAFPDA WHSDASSVQG
201: EGVQSVRSKV YVSPKLWYLR VNVIEAQDVE PSDRSQPPQA FVKVQVGNQI LKTKLCPNKT TNPMWNEDLV FVAAEPFEEQ FFLTVENKVT PAKDEVMGRL
301: ISPLSVFEKR LDHRAVHSKW YNLEKFGFGA LEGDKRHELK FSSRIHLRVC LEGGYHVMDE STLYISDVKP TARQLWKSPI GILEVGILSA QGLSPMKTKD
401: GKATTDPYCV AKYGQKWVRT RTIIDSSSPK WNEQYTWEVY DPCTVITLGV FDNCHLGGSE KSNSGAKVDS RIGKVRIRLS TLEADRIYTH SYPLLVLQTK
501: GLKKMGEVQL AVRFTCLSLA HMIYLYGHPL LPKMHYLHPF TVNQLDSLRY QAMSIVAARL SRAEPPLRKE NVEYMLDVDS HMWSMRRSKA NFFRIVSVFA
601: GLIAMSKWLG DVCYWKNPLT TILFHVLFFI LICYPELILP TTFLYMFLIG LWNFRFRPRH PAHMDTKVSW AEAASPDELD EEFDTFPTSK GQDVVKMRYD
701: RLRSVAGRIQ MVVGDIATQG ERFQALLSWR DPRATCLFVI FCLVAAMILY VTPFKIIALA GGMFWMRHPK FRSKMPSAPS NFFRKLPSKA DCML

Arabidopsis Description

FTIP1FT-interacting protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.