CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57334	Canola	cytosol	90.61	93.89
AT5G44760.1	Thale cress	cytosol	80.57	77.2
CDY49185	Canola	cytosol	44.76	61.01
Bra027570.1-P	Field mustard	cytosol	94.54	56.97
CDX81021	Canola	cytosol	25.76	41.12
CDY70344	Canola	cytosol	39.08	35.52
CDX67712	Canola	cytosol	55.68	32.95
CDX80993	Canola	extracellular	6.33	32.58
CDX98254	Canola	cytosol	55.02	32.56
CDY69710	Canola	cytosol	55.24	32.48
CDX97214	Canola	cytosol	54.15	32.25
CDX70485	Canola	cytosol	53.93	32.12
CDY68091	Canola	cytosol	53.93	32.12
CDX78498	Canola	cytosol	53.93	32.12
CDX80994	Canola	cytosol	7.21	32.04
Zm00001d046749_P001	Maize	mitochondrion	53.49	31.61
Zm00001d036801_P001	Maize	plasma membrane	53.06	31.4
EER90047	Sorghum	cytosol	52.84	31.23
Os05t0370600-01	Rice	plastid	52.4	31.01
TraesCS5D01G178600.1	Wheat	cytosol	51.97	30.87
TraesCS5D01G273300.1	Wheat	cytosol	51.97	30.75
TraesCS5B01G265100.1	Wheat	cytosol	51.97	30.75
TraesCS5A01G265400.1	Wheat	cytosol	51.97	30.75
HORVU5Hr1G073350.1	Barley	cytosol	51.97	30.75
TraesCS5B01G171600.1	Wheat	cytosol	51.75	30.74
HORVU5Hr1G053320.2	Barley	cytosol	51.53	30.61
CDY47660	Canola	endoplasmic reticulum	55.24	30.56
TraesCS5A01G174100.1	Wheat	cytosol	50.44	30.28
Solyc01g086700.2.1	Tomato	cytosol	51.97	29.75
VIT_13s0064g01400.t01	Wine grape	cytosol	51.31	29.67
PGSC0003DMT400087204	Potato	cytosol	52.18	29.43
KRH48448	Soybean	cytosol	45.2	29.24
CDY35343	Canola	golgi	17.25	28.21
CDX71747	Canola	cytosol	46.29	27.93
CDX77002	Canola	cytosol, peroxisome, plasma membrane	35.81	27.7
CDY33906	Canola	nucleus	14.41	27.39
KRH39245	Soybean	cytosol	43.45	26.53
KRH43466	Soybean	plasma membrane	12.88	26.22
KRH15602	Soybean	plasma membrane	40.61	24.0
CDX86768	Canola	cytosol	51.09	23.17
CDX89108	Canola	cytosol	45.2	22.52
CDY10076	Canola	cytosol, nucleus, plasma membrane	47.38	22.26
CDY01973	Canola	cytosol	47.6	22.0
CDX86328	Canola	cytosol	48.91	21.98
CDY54062	Canola	cytosol	47.6	21.91
CDY04800	Canola	cytosol	48.03	21.85
CDY32530	Canola	cytosol	47.16	21.84
CDY21373	Canola	cytosol	48.03	21.7
CDY48929	Canola	cytosol	46.29	21.5
CDY11377	Canola	cytosol	37.55	21.39
CDX74344	Canola	cytosol	44.98	21.17
CDX71710	Canola	cytosol	35.15	21.1
CDY13273	Canola	cytosol	21.18	21.0
CDX91899	Canola	cytosol	44.76	20.96
CDY21171	Canola	cytosol	43.01	19.37
CDY29951	Canola	cytosol	43.01	19.29
CDY35342	Canola	cytosol, peroxisome, plasma membrane	20.31	19.14
CDY42494	Canola	cytosol, plasma membrane	17.47	19.05
CDX81020	Canola	cytosol	16.38	18.8
CDX68168	Canola	cytosol	42.58	18.66
CDX85853	Canola	cytosol	42.36	18.58
CDY25472	Canola	cytosol	39.74	18.18
CDY38472	Canola	cytosol	39.74	18.15
CDX98964	Canola	endoplasmic reticulum, extracellular	3.28	10.64
CDX71748	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY13087	EnsemblPlantsGene:GSBRNA2T00070931001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	InterPro:PRibTrfase_C	PANTHER:PTHR10024	PANTHER:PTHR10024:SF226	PFAM:PF00168	PFAM:PF08372
ProteinID:CDY13087	ProteinID:CDY13087.1	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0004EDF788	UniProt:A0A078FJE1
MapMan:35.1	:	:	:	:	:

Description

BnaA09g17300DBnaA09g17300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJE1]

Coordinates

chrLK032031:-:491068..493265

Molecular Weight (calculated)

51540.3 Da

IEP (calculated)

5.151

GRAVY (calculated)

-0.317

Length

458 amino acids

Sequence
(BLAST)

001: MAENDFSLKE TCPKIGGGRS TPGGEMQTSS FDLVERMTFL YIRVVKARAL PSNDSFIEVT IGSYKGRTKN NTNPNPEFHE VFAFNKDRLQ GNVLDVAVKA
101: NQEVIIGKCK FEVAEIPTRV PPDSPLAPQW YRLEDINGNR FGGEVMLSVW MGTQADEVFP EAWHSDCVTV NGDNAVIARS KVYLSPRLWY LRVNIIEAQD
201: LVPLQGNRTN PEILPGLERG YDLGQNEECL GKCEVKLSQV ERRVMPDPVP AMWYNLERVV DSVVQGFAGR IHLRVSLDGG YHVLDESIQY SSDYRASAKI
301: LWTPAIGVLE LGVISASGLM PMKSRDGRGT TDAYCVAKYG QKWVRTRTIP PLGRDVVEYM LDFGSNIWSI RRGRANFERL VTFFTAFLDA WVWFDSVCKW
401: KSPLSKADSA LPDELDEEFD GFPSGKSADL VKKRYDSDLL NLHETADDFA CLLRHETP

Best Arabidopsis Sequence Match ( AT5G44760.1 )
(BLAST)

001: MAEHDFSLKE TCPKIGGRRS IPGGDMLTSS FDLVERMTFL YIRIVKARAL PSNDLFVEVT IGRYKGRTKR STNPYPNLEF DEVFAFNSDR LQGNMLEVTM
101: KMNEEEIIGQ CRFEVAEIPT RIPPDSPLAP QWDRLEDRNA NRFGEEVMVS VWMGTQADEV CPEAWHSDSA TVTGENAVIV RSKVYLSPRL WYLRVNVIEA
201: QVLVLLQGNR TNPEVLVKGF VGNVVVRSRV SQSRTMSPVL ERGYDVGQKE ECLGLCEIKL SQVERRVLPG PVPALWYNLE RVGDSGFAGR IHLRVSLDGG
301: YHVLDESIQY SSDYRASAKL LWTPTIGVLV LGVISASGSI PMKSRDGRGT TDAYCVAKYG QKWLGRSEPP LGRDVIEYML DFGSNIWCLR RGRAHFERIV
401: SFFTTFIDSW IWFDSVCKWK SPLSKADSAL PDELDEEFDG FPSARSADLV RNSGLWSNLL SLHETANDFA CVLRHETP

Arabidopsis Description

C2 domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FIZ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.