Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13087 | Canola | cytosol | 77.2 | 80.57 |
| CDY57334 | Canola | cytosol | 71.76 | 77.6 |
| CDY49185 | Canola | cytosol | 42.47 | 60.42 |
| Bra027570.1-P | Field mustard | cytosol | 80.54 | 50.66 |
| AT4G20080.1 | Thale cress | cytosol | 71.76 | 44.32 |
| AT3G57880.3 | Thale cress | cytosol | 54.6 | 33.76 |
| AT1G51570.1 | Thale cress | cytosol | 52.93 | 32.6 |
| AT5G12970.1 | Thale cress | cytosol | 52.09 | 32.38 |
| Zm00001d046749_P001 | Maize | mitochondrion | 51.46 | 31.74 |
| EER90047 | Sorghum | cytosol | 51.26 | 31.61 |
| Zm00001d036801_P001 | Maize | plasma membrane | 51.05 | 31.52 |
| Os05t0370600-01 | Rice | plastid | 50.21 | 31.01 |
| TraesCS5B01G265100.1 | Wheat | cytosol | 49.79 | 30.75 |
| TraesCS5A01G265400.1 | Wheat | cytosol | 49.79 | 30.75 |
| HORVU5Hr1G073350.1 | Barley | cytosol | 49.79 | 30.75 |
| TraesCS5D01G273300.1 | Wheat | cytosol | 49.79 | 30.75 |
| TraesCS5B01G171600.1 | Wheat | cytosol | 49.16 | 30.48 |
| TraesCS5D01G178600.1 | Wheat | cytosol | 48.95 | 30.35 |
| HORVU5Hr1G053320.2 | Barley | cytosol | 48.74 | 30.22 |
| TraesCS5A01G174100.1 | Wheat | cytosol | 47.91 | 30.01 |
| VIT_13s0064g01400.t01 | Wine grape | cytosol | 49.16 | 29.67 |
| Solyc01g086700.2.1 | Tomato | cytosol | 48.54 | 29.0 |
| AT5G06850.1 | Thale cress | cytosol | 48.12 | 28.97 |
| PGSC0003DMT400087204 | Potato | cytosol | 48.54 | 28.57 |
| KRH48448 | Soybean | cytosol | 41.21 | 27.82 |
| KRH43466 | Soybean | plasma membrane | 12.34 | 26.22 |
| KRH39245 | Soybean | cytosol | 39.54 | 25.2 |
| AT4G11610.1 | Thale cress | cytosol | 48.95 | 23.15 |
| KRH15602 | Soybean | plasma membrane | 37.03 | 22.84 |
| AT5G03435.1 | Thale cress | cytosol | 33.89 | 21.75 |
| AT5G48060.1 | Thale cress | cytosol | 47.07 | 21.72 |
| AT1G22610.1 | Thale cress | cytosol | 46.03 | 21.38 |
| AT3G61300.1 | Thale cress | cytosol | 42.68 | 20.99 |
| AT1G04150.1 | Thale cress | cytosol | 44.35 | 20.95 |
| AT3G61720.1 | Thale cress | cytosol | 34.52 | 20.75 |
| AT4G00700.1 | Thale cress | cytosol | 43.51 | 20.68 |
| AT3G03680.1 | Thale cress | cytosol | 39.33 | 18.49 |
| AT1G74720.1 | Thale cress | cytosol | 39.96 | 17.67 |
| AT5G17980.1 | Thale cress | cytosol | 36.82 | 16.78 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:35.1 | EntrezGene:834505 | ProteinID:AED95158.1 | ArrayExpress:AT5G44760 | EnsemblPlantsGene:AT5G44760 |
| RefSeq:AT5G44760 | TAIR:AT5G44760 | RefSeq:AT5G44760-TAIR-G | EnsemblPlants:AT5G44760.1 | TAIR:AT5G44760.1 | Unigene:At.55363 |
| ProteinID:BAB08829.1 | InterPro:C2_dom | InterPro:C2_domain_sf | GO:GO:0008150 | InterPro:IPR000008 | InterPro:IPR035892 |
| RefSeq:NP_199289.1 | PFAM:PF00168 | PFAM:PF08372 | InterPro:PRibTrfase_C | PANTHER:PTHR10024 | PANTHER:PTHR10024:SF226 |
| UniProt:Q9FIZ1 | SMART:SM00239 | SUPFAM:SSF49562 | UniParc:UPI00000A43CA | SEG:seg | : |
Description
C2 domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FIZ1]
Coordinates
chr5:+:18060586..18062764
Molecular Weight (calculated)
53937.4 Da
IEP (calculated)
5.769
GRAVY (calculated)
-0.248
Length
478 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEHDFSLKE TCPKIGGRRS IPGGDMLTSS FDLVERMTFL YIRIVKARAL PSNDLFVEVT IGRYKGRTKR STNPYPNLEF DEVFAFNSDR LQGNMLEVTM
101: KMNEEEIIGQ CRFEVAEIPT RIPPDSPLAP QWDRLEDRNA NRFGEEVMVS VWMGTQADEV CPEAWHSDSA TVTGENAVIV RSKVYLSPRL WYLRVNVIEA
201: QVLVLLQGNR TNPEVLVKGF VGNVVVRSRV SQSRTMSPVL ERGYDVGQKE ECLGLCEIKL SQVERRVLPG PVPALWYNLE RVGDSGFAGR IHLRVSLDGG
301: YHVLDESIQY SSDYRASAKL LWTPTIGVLV LGVISASGSI PMKSRDGRGT TDAYCVAKYG QKWLGRSEPP LGRDVIEYML DFGSNIWCLR RGRAHFERIV
401: SFFTTFIDSW IWFDSVCKWK SPLSKADSAL PDELDEEFDG FPSARSADLV RNSGLWSNLL SLHETANDFA CVLRHETP
101: KMNEEEIIGQ CRFEVAEIPT RIPPDSPLAP QWDRLEDRNA NRFGEEVMVS VWMGTQADEV CPEAWHSDSA TVTGENAVIV RSKVYLSPRL WYLRVNVIEA
201: QVLVLLQGNR TNPEVLVKGF VGNVVVRSRV SQSRTMSPVL ERGYDVGQKE ECLGLCEIKL SQVERRVLPG PVPALWYNLE RVGDSGFAGR IHLRVSLDGG
301: YHVLDESIQY SSDYRASAKL LWTPTIGVLV LGVISASGSI PMKSRDGRGT TDAYCVAKYG QKWLGRSEPP LGRDVIEYML DFGSNIWCLR RGRAHFERIV
401: SFFTTFIDSW IWFDSVCKWK SPLSKADSAL PDELDEEFDG FPSARSADLV RNSGLWSNLL SLHETANDFA CVLRHETP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.