Factsheet for VIT_13s0064g01400.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90047	Sorghum	cytosol	68.31	69.81
VIT_08s0007g06170.t01	Wine grape	cytosol	67.93	69.24
Zm00001d036801_P001	Maize	plasma membrane	67.55	69.12
Zm00001d046749_P001	Maize	mitochondrion	67.55	69.03
Os05t0370600-01	Rice	plastid	67.3	68.86
HORVU5Hr1G073350.1	Barley	cytosol	66.41	67.96
TraesCS5D01G273300.1	Wheat	cytosol	66.29	67.83
TraesCS5B01G265100.1	Wheat	cytosol	66.29	67.83
TraesCS5A01G265400.1	Wheat	cytosol	66.16	67.7
HORVU5Hr1G053320.2	Barley	cytosol	63.64	65.37
TraesCS5B01G171600.1	Wheat	cytosol	63.13	64.85
TraesCS5D01G178600.1	Wheat	cytosol	63.01	64.72
VIT_06s0004g01550.t01	Wine grape	cytosol, peroxisome, plasma membrane	62.25	64.36
TraesCS5A01G174100.1	Wheat	cytosol	58.71	60.94
VIT_08s0007g06140.t01	Wine grape	cytosol	59.97	59.82
Solyc01g086700.2.1	Tomato	cytosol	59.72	59.12
PGSC0003DMT400087204	Potato	cytosol	59.6	58.13
VIT_02s0087g00450.t01	Wine grape	extracellular	6.57	55.91
Bra027570.1-P	Field mustard	cytosol	53.03	55.26
KRH48448	Soybean	cytosol	49.24	55.08
VIT_04s0023g03270.t01	Wine grape	plasma membrane	11.24	53.61
KRH39245	Soybean	cytosol	50.38	53.2
AT4G20080.1	Thale cress	cytosol	51.77	52.97
CDY13087	Canola	cytosol	29.67	51.31
CDY49185	Canola	cytosol	20.96	49.4
AT5G44760.1	Thale cress	cytosol	29.67	49.16
CDY57334	Canola	cytosol	27.27	48.87
KRH43466	Soybean	plasma membrane	13.64	48.0
VIT_15s0046g03030.t01	Wine grape	cytosol	59.72	46.46
VIT_18s0072g01170.t01	Wine grape	cytosol	58.46	46.21
VIT_13s0064g01380.t01	Wine grape	cytosol	62.63	44.81
KRH15602	Soybean	plasma membrane	43.69	44.65
VIT_07s0005g04770.t01	Wine grape	cytosol	55.56	43.48
VIT_17s0000g05700.t01	Wine grape	cytosol	50.13	39.35
VIT_08s0056g01530.t01	Wine grape	cytosol	47.73	37.95
VIT_02s0025g03610.t01	Wine grape	cytosol	62.25	31.48

Protein Annotations

EntrezGene:100244312	wikigene:100244312	Gene3D:2.60.40.150	MapMan:35.1	InterPro:C2_dom	InterPro:C2_domain_sf
ProteinID:CCB49480	ProteinID:CCB49480.1	UniProt:F6HB96	EMBL:FN595509	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR000008	InterPro:IPR035892	EntrezGene:LOC100244312	wikigene:LOC100244312	PFAM:PF00168
PFAM:PF08372	InterPro:PRibTrfase_C	PFscan:PS50004	PANTHER:PTHR10024	PANTHER:PTHR10024:SF226	SMART:SM00239
SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI000210A3CE	ArrayExpress:VIT_13s0064g01400	EnsemblPlantsGene:VIT_13s0064g01400	EnsemblPlants:VIT_13s0064g01400.t01
RefSeq:XP_002263552	RefSeq:XP_002263552.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr13:-:23271094..23281515

Molecular Weight (calculated)

90725.5 Da

IEP (calculated)

9.599

GRAVY (calculated)

-0.178

Length

792 amino acids

Sequence
(BLAST)

001: MGLIVEVKKE VLAVLTMPRP APNQSSARED DYCLKETSPN LGGGRLSRGD KLTTAFDLVE QMHYLYVRVV KAKELPGKDG SESCDPYVEV KVGNFKGFTK
101: HIEKKSNPVW SQVFAFSKDR LQSSFIEVSV KDKNGGKDDF MGVVLFDLHD VPRRVPPDSP LAPQWYRLED RKGSKVKGEL MLAVWMGTQA DESFTEAWQS
201: DAAGVSVEAL ASIRSKVYVS PKLWYLRVNV IQAQDLVPSD RTRNEVYVKA ALGTIVLRTR FPQTRTINPF WNEDLMFVAS EPFEEPLVLS VENRVVANKE
301: ETLGKCMISL QDVERRLENR PVSAKWFNLE KMSGEQKEVK FSSRIHLRIC LDGGYHVLDE ATHFSTDFRP TMKHLWKPST GVLELGIINA HDLLLKEKKG
401: GRRNTDAYCV AKYGQKWIRT RTIIDSSSPR WNEQYTWEVF DPCTVITVGV FDNSHLHGGD KAAGSKDTII GKVRIRLSTL ETGRVYTHSY PLLVLDSSGL
501: KKMGEIQLSV KFSCSSLLNL LNVYAQPLLP KMHYVQPLSM YQVDSLRHQA TKIVSARLGR AEPPLRKEVV EYMLDVGSNM FSMRRSKANY YRIIEVISDL
601: KMALKWFDEI CLWKNPFTTV LIHILFLLLA LFPELILPLV FFYLLIIGVW RYRRRPRHPP HMEVKLSLPD TVFPDELEEE FDSFPTSLQA EILKIRYDRV
701: RSVASRIQTL MGDLATQGER LQALLSWRDP RATALCMIFC LTAGTLFLFI PFRVFAVLVV LYVLRHPRLR HRMPSVPLSF FKRLPARTDS MF

Best Arabidopsis Sequence Match ( AT1G51570.1 )
(BLAST)

001: MQRPPPEDFS LKETKPHLGG GKVTGDKLTT TYDLVEQMQY LYVRVVKAKE LPGKDLTGSC DPYVEVKLGN YRGTTRHFEK KSNPEWNQVF AFSKDRVQAS
101: YLEATVKDKD LVKDDLIGRV VFDLNEIPKR VPPDSPLAPQ WYRLEDGKGQ KVKGELMLAV WFGTQADEAF PEAWHSDAAT VSGTDALANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPSDKGR YPEVFVKVIM GNQALRTRVS QSRSINPMWN EDLMFVVAEP FEEPLILSVE DRVAPNKDEV LGRCAVPLQY LDKRFDYRPV
301: NSRWFNLEKH VIMEGGEKKE IKFASKIHMR ICLEGGYHVL DESTHYSSDL RPTAKQLWKP NIGVLELGVL NATGLMPMKA KEGGRGTTDA YCVAKYGQKW
401: IRTRTIIDSF TPRWNEQYTW EVFDPCTVVT VGVFDNCHLH GGDKNNGGGK DSRIGKVRIR LSTLEADRVY THSYPLLVLH PSGVKKMGEI HLAVRFTCSS
501: LLNMMYMYSM PLLPKMHYLH PLTVSQLDNL RHQATQIVST RLTRAEPPLR KEVVEYMLDV GSHMWSMRRS KANFFRIMGV LSGIIAVGKW FEQICVWKNP
601: ITTVLIHILF IILVIYPELI LPTIFLYLFL IGVWYYRWRP RHPPHMDTRL SHADSAHPDE LDEEFDTFPT SRPSDIVRMR YDRLRSIAGR IQTVVGDLAT
701: QGERFQSLLS WRDPRATALF VLFCLIAAVI LYITPFQVVA FAIGLYVLRH PRLRYKLPSV PLNFFRRLPA RTDCML

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8H3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.