Factsheet for VIT_08s0007g06140.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0023g03270.t01	Wine grape	plasma membrane	18.51	88.55
GSMUA_Achr1P16560_001	Banana	endoplasmic reticulum, plasma membrane	28.84	86.42
VIT_02s0087g00450.t01	Wine grape	extracellular	9.7	82.8
GSMUA_Achr9P27720_001	Banana	mitochondrion	48.24	78.32
GSMUA_Achr1P16550_001	Banana	cytosol	32.62	75.95
Zm00001d036804_P001	Maize	cytosol	63.73	74.85
TraesCS7B01G481700.1	Wheat	cytosol	11.71	73.81
TraesCS7A01G403500.1	Wheat	cytosol	75.06	73.31
EER90045	Sorghum	cytosol	74.94	73.19
TraesCS7B01G302900.1	Wheat	cytosol	74.81	73.15
HORVU7Hr1G094580.2	Barley	cytosol	74.94	72.92
TraesCS7D01G396900.1	Wheat	cytosol	74.69	72.85
VIT_08s0007g06170.t01	Wine grape	cytosol	70.91	72.46
Os06t0614000-01	Rice	cytosol	74.06	71.36
VIT_06s0004g01550.t01	Wine grape	cytosol, peroxisome, plasma membrane	63.73	66.06
TraesCS2A01G329400.1	Wheat	cytosol	65.11	62.67
TraesCS2D01G333300.1	Wheat	cytosol	64.74	62.53
Zm00001d003321_P001	Maize	cytosol	65.37	60.14
VIT_13s0064g01400.t01	Wine grape	cytosol	59.82	59.97
KXG26530	Sorghum	cytosol	64.99	59.45
Os04t0472900-01	Rice	cytosol	62.72	58.25
GSMUA_Achr3P11130_001	Banana	cytosol	52.39	58.02
VIT_13s0064g01380.t01	Wine grape	cytosol	80.48	57.72
TraesCS2B01G352900.1	Wheat	mitochondrion	57.18	52.85
VIT_15s0046g03030.t01	Wine grape	cytosol	64.23	50.1
VIT_18s0072g01170.t01	Wine grape	cytosol	60.33	47.8
VIT_07s0005g04770.t01	Wine grape	cytosol	60.45	47.43
VIT_17s0000g05700.t01	Wine grape	cytosol	51.13	40.24
VIT_08s0056g01530.t01	Wine grape	cytosol	49.5	39.46
VIT_02s0025g03610.t01	Wine grape	cytosol	65.24	33.08
HORVU2Hr1G082010.3	Barley	cytosol	29.6	24.5

Protein Annotations

EntrezGene:100262254	wikigene:100262254	Gene3D:2.60.40.150	MapMan:35.1	EMBL:AM474653	InterPro:C2_dom
InterPro:C2_domain_sf	ProteinID:CAN75086	ProteinID:CAN75086.1	ProteinID:CCB55270	ProteinID:CCB55270.1	UniProt:F6HLL4
EMBL:FN595991	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000008	InterPro:IPR035892
EntrezGene:LOC100262254	wikigene:LOC100262254	PFAM:PF00168	PFAM:PF08372	InterPro:PRibTrfase_C	PFscan:PS50004
PANTHER:PTHR10024	PANTHER:PTHR10024:SF236	SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI00015CB0C4
ArrayExpress:VIT_08s0007g06140	EnsemblPlantsGene:VIT_08s0007g06140	EnsemblPlants:VIT_08s0007g06140.t01	RefSeq:XP_002277970	RefSeq:XP_002277970.2	SEG:seg

Description

No Description!

Coordinates

chr8:+:19953555..19955942

Molecular Weight (calculated)

91268.4 Da

IEP (calculated)

9.227

GRAVY (calculated)

-0.292

Length

794 amino acids

Sequence
(BLAST)

001: MQASSNHQED YKLKDTHPQL GERWPHGGVR GGGGWISSDR VTSTYDLVEQ MYYLYVRVVK AKDLPTNAVT GGCDPYVEVK LGNYKGKTMH FEKKTNPEWH
101: QVFAFSKDKI QSSVLEVYVR ERDMVSRDDY LGKVVFDMNE VPTRVPPDSP LAPQWYRLED RRGDSKVKGE VMLAVWMGTQ ADEAFPEAWH SDAATVHGEG
201: VFNIRSKVYV SPKLWYLRVN VIEAQDVESQ DKGQLPQVFV KAQVGNQVLK TKTCPTRTTS PFWNEDLLFV AAEPFEEMLV MTIENKMGPS KDEVMGRISL
301: PLNIFERRMD HRPVHSRWFN LEKFGFGALE GDKRHELKFS SRVHLRVCLE GAYHVLDEST MYISDQRPTA RQLWKQPIGI LEVGILSAQG LLPMKTRDGR
401: GTTDAYCVAK YGQKWVRTRT ILESSTPKWN EQYTWEVYDP CTVITLGVFD NCHLGGNEKP GGGGGAGKDS RIGKVRIRLS TLETDRIYTH AYPLLVLHPS
501: GVKKMGELQL AVRFTCLSLA NMIYLYGHPL LPKMHYLHPF TVNQLDSLRY QAMSIVAARL GRAEPPLRKE VVEYMLDVDS HMWSMRRSKA NFFRIVSLFS
601: GMISMSRWLG EVCQWKNPVT SVLVHVLFFI LICYPELILP TIFLYMFLIG IWNYRFRPRH PPHMDTKLSW AEAVHRDELD EEFDTFPTSK PQDVVMMRYD
701: RLRSVAGRIQ TVVGDMATQG ERFQSLLSWR DPRATSLYIV FCLIAAVVLY VTPFKILALV AGLFWLRHPR FRSKMPSAPS NFFRRLPARS DSML

Best Arabidopsis Sequence Match ( AT5G06850.1 )
(BLAST)

001: MAAKDGAKSQ EDYKLKDMKP ELGERWPHGG QRGGTGWIGS ERAASTYDLV EQMFYLYVRV VKAKDLPPNP VTSNCDPYVE VKIGNYKGKT KHFEKRTNPE
101: WNQVFAFSKD KVQSSTVEVF VRDKEMVTRD EYIGKVVFDM REVPTRVPPD SPLAPQWYRL EDRRGESKKR GEVMVAVWLG TQADEAFPDA WHSDASSVQG
201: EGVQSVRSKV YVSPKLWYLR VNVIEAQDVE PSDRSQPPQA FVKVQVGNQI LKTKLCPNKT TNPMWNEDLV FVAAEPFEEQ FFLTVENKVT PAKDEVMGRL
301: ISPLSVFEKR LDHRAVHSKW YNLEKFGFGA LEGDKRHELK FSSRIHLRVC LEGGYHVMDE STLYISDVKP TARQLWKSPI GILEVGILSA QGLSPMKTKD
401: GKATTDPYCV AKYGQKWVRT RTIIDSSSPK WNEQYTWEVY DPCTVITLGV FDNCHLGGSE KSNSGAKVDS RIGKVRIRLS TLEADRIYTH SYPLLVLQTK
501: GLKKMGEVQL AVRFTCLSLA HMIYLYGHPL LPKMHYLHPF TVNQLDSLRY QAMSIVAARL SRAEPPLRKE NVEYMLDVDS HMWSMRRSKA NFFRIVSVFA
601: GLIAMSKWLG DVCYWKNPLT TILFHVLFFI LICYPELILP TTFLYMFLIG LWNFRFRPRH PAHMDTKVSW AEAASPDELD EEFDTFPTSK GQDVVKMRYD
701: RLRSVAGRIQ MVVGDIATQG ERFQALLSWR DPRATCLFVI FCLVAAMILY VTPFKIIALA GGMFWMRHPK FRSKMPSAPS NFFRKLPSKA DCML

Arabidopsis Description

FTIP1FT-interacting protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.