Factsheet for VIT_07s0005g04770.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400025225	Potato	cytosol	75.99	76.14
Solyc09g064230.1.1	Tomato	cytosol	75.89	76.04
Bra032527.1-P	Field mustard	cytosol	66.6	68.43
CDY32530	Canola	cytosol	66.7	68.25
CDY10076	Canola	cytosol, nucleus, plasma membrane	65.51	68.0
AT1G04150.1	Thale cress	cytosol	67.19	67.19
GSMUA_Achr3P14580_001	Banana	cytosol	45.36	64.74
VIT_08s0007g06170.t01	Wine grape	cytosol	48.22	62.81
Os02t0816000-01	Rice	cytosol	60.87	61.66
TraesCS6D01G371600.1	Wheat	cytosol	60.57	60.87
VIT_08s0007g06140.t01	Wine grape	cytosol	47.43	60.45
TraesCS6A01G386900.1	Wheat	cytosol	60.38	60.44
TraesCS6B01G426600.1	Wheat	cytosol	60.18	60.24
VIT_02s0087g00450.t01	Wine grape	extracellular	5.53	60.22
Zm00001d018473_P001	Maize	cytosol	59.49	59.9
HORVU6Hr1G090200.1	Barley	cytosol	59.98	59.8
HORVU6Hr1G090330.2	Barley	cytosol	59.98	59.8
EES07745	Sorghum	cytosol	59.49	59.37
VIT_04s0023g03270.t01	Wine grape	plasma membrane	9.49	57.83
VIT_06s0004g01550.t01	Wine grape	cytosol, peroxisome, plasma membrane	42.69	56.4
VIT_13s0064g01400.t01	Wine grape	cytosol	43.48	55.56
VIT_15s0046g03030.t01	Wine grape	cytosol	52.47	52.16
VIT_18s0072g01170.t01	Wine grape	cytosol	49.8	50.3
VIT_13s0064g01380.t01	Wine grape	cytosol	54.74	50.05
VIT_17s0000g05700.t01	Wine grape	cytosol	45.85	45.99
VIT_08s0056g01530.t01	Wine grape	cytosol	43.58	44.28
VIT_02s0025g03610.t01	Wine grape	cytosol	53.75	34.74

Protein Annotations

EntrezGene:100246307	wikigene:100246307	Gene3D:2.60.40.150	MapMan:35.1	EMBL:AM458264	InterPro:C2_dom
InterPro:C2_domain_sf	ProteinID:CAN83208	ProteinID:CAN83208.1	ProteinID:CCB60200	ProteinID:CCB60200.1	UniProt:F6HZT4
EMBL:FN596502	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000008	InterPro:IPR035892
EntrezGene:LOC100246307	wikigene:LOC100246307	PFAM:PF00168	PFAM:PF08372	InterPro:PRibTrfase_C	PFscan:PS50004
PANTHER:PTHR10024	PANTHER:PTHR10024:SF268	SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI0001983AF0
ArrayExpress:VIT_07s0005g04770	EnsemblPlantsGene:VIT_07s0005g04770	EnsemblPlants:VIT_07s0005g04770.t01	unigene:Vvi.6209	RefSeq:XP_002268191	RefSeq:XP_002268191.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7:-:8009531..8012777

Molecular Weight (calculated)

113810.0 Da

IEP (calculated)

9.840

GRAVY (calculated)

-0.311

Length

1012 amino acids

Sequence
(BLAST)

0001: MDDANSNKEK LVVEVVAAHN LMPKDGEGSC SPFVEVEFEN QRLRTQVKYK DLNPVWSEKL VFHVKDVADL PYRTIEINVF NEKRSSNSRN FLGKVRVSGT
0101: SIAKEGEEVA QLYTLDKRSL FSHIRGEISL KFYLSTKEAV KEVTSGDAAV SGSSSSSSKK NKKLQQQGPA MARQQQQQMA PDNNNKPSQQ TQQHAKPGGP
0201: KPGDIKPVVI TTGHAPAIPG PGGGVPAGVG GLRNVFSGGS NEFSLKETSP HLGGGLLHRD KTSSTYDLVE QMQYLYVRIL KCRDVSASGG GEVMAEVKLG
0301: NYRGITKRVS ANNPEWGQVF AFSKDCIQSS VAEIFVKEKD KDEFLGRVWF DLNEVPRRVP PDSQLASQWH RMEDKKGDKS KAGEVMVSIW FGTQADEAFA
0401: EAWHSKAANV HFDGLSSIKS KVYLSPKLWY FRVTIIEAQD IVPGEKGASM VKFPELSVKA QVGNQVFRTR IAQASPSRSL SNPYWNEDLM FVVAEPFEDY
0501: LLVSVEDRVA PGRDEVVGRV LLPVTAIERR TDDKAVTSRW FNLDNHLGNA GEPKIVSRFG SRIHLRVSLE GGYHVLDEAT MYSSDVRPTA KQLWKPHIGV
0601: LEIGILGATG LIPIKLKEGK GGSTDSYCVA KYGHKWVRTR TVVDSLSPKW NEQYTWEVFD PCTVITVGVF DNSRVDKNTT NAGGYRDSRI GKVRIRLSTL
0701: ESDRVYTHSY PLLMLHTSGV KKMGELHLAV RFSCANMGNM LSIYTLPLLP KMHYVHPLSV NQLDSLRYQA MNVVASRLSR AEPALGREVV EYMLDHDSHM
0801: WSMRRSKANF FRLMSVLSSF VAMGRFVESM RNWNKPVYST IFMMIFLVLV SFPELIIPLL LLYMAFVGIW RYRSRPRQPP HMDTRLSHAE TVYPDELDEE
0901: FDSFPTSRSA EIVRMRYDRL RSVAGRIQTV VGDMASQGER FQALLSWRDP RATFLFVNFC LFAAVGFYLV PTKAVVALWG LYVLRPPKFR SKLPSRALSF
1001: FRRLPTKADS FL

Best Arabidopsis Sequence Match ( AT1G04150.1 )
(BLAST)

0001: MTEAKTGTGN ERLVVEIVGA HNLMPKDGED SSSPFVEVQF ENQRLRTKVK PKDLNPIWNE KLVFHVIDVN DLRHKALEIN VYNEKRSSNS RNFLGKVRVL
0101: GSSVGREGES VVQLYTLEKR SLFSSVRGEI SVKHYMTTTA ENGENVRRVN RSGGSKKSKK VQNVSSSMAI QQQQQQQQQQ ISLHNHNRGN QQQSQQNGQG
0201: QRMLPFYPHQ SEIKPLVITA LPSPMPGPGP RPIVYSNGSS EFSLKETKPC LGGTSNGLGG LSSHKDKTSS TYDLVEQMQY LYVNIVKAKD LSVLGEVVSE
0301: VKLGNYRGVT KKVSSNSSNP EWNQVFVFSK ERIQSSVVEL FVKEGNKDEY TGRVLFDLSE IPTRVPPDSP LAPQWYKIEN RNGGRGNGEL MVSVWFGTQA
0401: DEAFAEAWHS KAGNVHIEEL SSIKSKVYLS PKLWYLRISV IEAQDVAIMD KGSSLMRFPE LSAKLQVGSQ ILRTAIASAI PTKSFSNPYW NEDLMFVVAE
0501: PFEDCVTVVV EDRLNGGAIG GQNDVAVGRV QIPISAVERR TGDTLVGSRW FSLDNGNNNN RFGSRIHLRL SLDGGYHVLD EATMYNSDVR PTAKELWKPQ
0601: VGLLEIGILS ATGLMPMKVR DGKCGGIADS YCVAKYGPKW VRTRTVVDSL CPKWNEQYTW EVYDPCTVVT VGVFDNARVN ENNNSRDVRI GKVRIRLSTL
0701: ETGRVYTHSY PLIVLHPSGV KKTGELHLAV RLSCGNAVNM LHMYALPLLP KMHYTQPLGV HMLERLRYQT LNAVAARLSR AEPPLGREVV EYMLDHDFHV
0801: WSMRRSKANF FRLVNVISGL VAVAKLVEVM RSWSKPVYST VFVLAFLFMV LFPELLLPCL LLYTAAVGVW RFRRRSRYPP HMDARISHAE TVFPDELDEE
0901: FDTFPTSRGF DVVRMRYDRV RSIAGRVQTV VGDMASQGER VQALLSWRDP RATFLFLMFC LLAAVGFYTV PVKLTVAISG LYYLRPPRFR RKLPSRGLSF
1001: FRRLPSRADS LL

Arabidopsis Description

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:O64492]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.