Skip to main content
crop-pal logo
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 1
  • peroxisome 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400065015 Potato cytosol 97.06 94.62
KRH13902 Soybean mitochondrion 59.8 80.25
KRH43469 Soybean mitochondrion 59.34 79.53
Solyc03g077920.1.1 Tomato cytosol 56.12 77.31
Solyc10g080420.1.1 Tomato nucleus 37.26 74.59
Solyc10g078680.1.1 Tomato cytosol 50.32 72.55
Solyc10g080430.1.1 Tomato nucleus 50.69 71.19
VIT_13s0064g01380.t01 Wine grape cytosol 72.22 70.91
KRH36455 Soybean cytosol 74.15 68.31
KRH27512 Soybean cytosol 73.51 67.71
CDX86328 Canola cytosol 63.29 67.52
AT5G48060.1 Thale cress cytosol 64.03 67.18
Solyc03g095420.1.1 Tomato cytosol 3.5 66.67
Bra037512.1-P Field mustard cytosol 64.31 65.7
Solyc01g006620.2.1 Tomato cytosol 44.8 63.41
Solyc01g086700.2.1 Tomato cytosol 43.79 59.5
Solyc08g008020.1.1 Tomato plastid 53.45 58.1
Solyc02g044030.1.1 Tomato cytosol, nucleus, unclear 17.57 56.34
Solyc01g094410.2.1 Tomato nucleus 51.61 55.6
Solyc09g064230.1.1 Tomato cytosol 50.41 54.26
Solyc11g022400.1.1 Tomato nucleus 45.72 52.93
Solyc03g113190.1.1 Tomato cytosol 43.88 45.56
Solyc11g022460.1.1 Tomato nucleus 30.82 45.33
Solyc01g065500.2.1 Tomato cytosol 40.39 44.25
Solyc01g007170.2.1 Tomato cytosol 38.55 44.11
Protein Annotations
EnsemblPlants:Solyc01g086720.2.1EnsemblPlantsGene:Solyc01g086720.2Gene3D:2.60.40.150GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:C2_domInterPro:C2_domain_sfInterPro:IPR000008InterPro:IPR035892InterPro:PRibTrfase_CPANTHER:PTHR10024
PANTHER:PTHR10024:SF201PFAM:PF00168PFAM:PF08372PFscan:PS50004SEG:segSMART:SM00239
SUPFAM:SSF49562TMHMM:TMhelixUniParc:UPI0002762D71UniProt:K4AY65MapMan:35.1:
Description
No Description!
Coordinates
chr1:-:81676121..81679610
Molecular Weight (calculated)
124839.0 Da
IEP (calculated)
8.855
GRAVY (calculated)
-0.408
Length
1087 amino acids
Sequence
(BLAST)
0001: MKLIVEVIDA YDLMPKDGEG SVSAFVEVDF ENQLSKTRTV PKNLNPTWNH KLIFHLDDIK NHRYKYIDVS VYHERRPIPG RNFLGRVRIP CSNIVKKGEE
0101: VYQRFQLEKK WFSSFVKGEI GLKIYISSPS DPNLYPKKSP SPSNIPSIEN PEQLDNPPPS LPASEVSTLD TPKDSNSSEV QNTENTAISG ADQSSSFAVV
0201: EKTGHLTPSE QDTESVEHIE ETSQFVFKHQ AMQQPVISIR KRPGFQPTMQ HGVDHPRAIP SHQGVQLPIH HQVDHPRAIH GQPGVQPPMQ YQVAQSRAMH
0301: NHPKDDYELK DTNPQLGEQW PRVGGYGGRG WMNSDRHAST YDLVEQMFYL YVRVVKSKDL QPSVLTGSCD PYVEVKMGNY KGRTKHFDKK MNAEWNQVFA
0401: FSKDRIQSSV LEVYVKDKDM MGRDDNLGKV VFDLNEVPTR VPPDSPLAPQ WYRLEDQRGE GKIRGEIMLA VWMGTQADEA FSDAWHADAA FVHGEGVMSV
0501: RSKVYVSPKL WYVRVNVIEA QDIIPNDQSR LPEIFVKAQV GNQVLKTDIC PARTANPMWN EDLVFVAAEP FEEQLVLSIE DRVHPMKDEI LGKISFPLNT
0601: FEKRLDHRPV HSRWFNLEKF GFGSLEVDRR KELKFSSRVH LRVCLEGGYH VLDESTMYIS DQRPTARQLW KPPVGILEVG ILGAEGLLPM KMKDSRGSTD
0701: AYCVAKYGQK WVRTRTILDT FSPKWNEQYT WEVYDPSTVI TLGVFDNCHL GVEKQGTGAA RDSRIGKVRI RLSTLESHRI YTHSYPLLVL HPSGVKKMGE
0801: LQLAVRFTSL SLANMIHTYG HPLLPKMHYL HPFTVNQVDN LRYQAMSIVA VRLARAEPPL RKEVVEYMLD VDSHMWSMRR SKANFFRIMS LLSGLISVNR
0901: WFGDICHWKN PVTSVLVHIL FLILIWYPEL ILPTLFLYMF LIGLWNYRFR PRHPPHMDTK LSWAETAHPD ELDEEFDTFP TSRPHDIVRM RYDRLRSVAG
1001: RIQTVVGDIA TQGERLQGVL SWRDPRATSL FIMFSLFAAV MLYVTPFRVV ALVAGLYMLR HPRFRSKMPS VPSNFFKRLP ARTDSML
Best Arabidopsis Sequence Match ( AT5G48060.1 )
(BLAST)
0001: MRNTTKLVVH VVDAQYLMPR DGQGSASPFV EVDFLNQLSK TRTVPKSLNP VWNQKLYFDY DQSVINQHNQ HIEVSVYHER RPIPGRSFLG RVKISLCNIV
0101: YKDDQVYQRF TLEKKWLLSS VKGEIGLKFY ISSSEEDQTF PLPSKPYTSP TQASASGTEE DTADSETEDS LKSFASAEEE DLADSVSECV EGKKSEEVKE
0201: PVQKLHRQEV FARPAPMQSI RLRSRENPHE AQKPMSRGAN QLHPQNPNHL QSYGDTDLDD FKVKDMNLDL GERWPNPNAG ERFTGTYDLV EQMFYLYVRV
0301: VKAKELPPGS ITGGCDPYVE VKLGNYKGRT KIFDRKTTIP EWNQVFAFTK ERIQSSVLEV FVKDKETLGR DDILGKVVFD LNEIPTRVPP NSPLAPQWYR
0401: LEDWRGEGKV VRGEIMLAVW MGTQADEAFP EAWHADSASV HGEGVFNIRS KVYVSPKLWY LRVNVIEAQD MIPSDRNRLP DVFVKASVGM QTLKTSICSI
0501: KTTNPLWKED LVFVVAEPFE EQLVISVEDR VHTSKDEVIG KITLPMNVFE KRLDHRPVHS RWFNLDKYGT GVLEPDARRK EHKFSSRIHL RICLEGGYHV
0601: MDESTMYISD TRPTARQLWK QPVGMLEIGI LGANGLVPMK LKDGRGSTNA YCVAKYGQKW VRTRTILDTL SPRWNEQYTW EVYDPCTVIT LGVFDNSHLG
0701: SAQSGTADSR DARIGKVRIR LSTLEAHKIY THSFPLLVLQ PHGLKKTGDL QISVRFTTLS LANIIYNYGH PLLPKMHYLF PFTVNQVDGL RYQAMNIVST
0801: RLGRAEPPLR KEVVEYMLDV DSHLWSMRRS KANFFRIMSL LSGYFLVGKW LEDVCNWRYP VTSVLVNVLF FILVMYPELI LPTMFLYMFF IGLWNFRSRP
0901: RHPPHMDMKL SWAEAVGPDE LDEEFDTFPT SRSQELVRLR YDRLRSVAGR IQTVVGDIAA QGERIQSLLS WRDPRATSLF ILFCLAASVV LYAMPFKAIA
1001: LASGLYYLRH PKFRSKLPSL PSNFFKRLPS STDSLL
Arabidopsis Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FI32]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.