CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
nucleus 1
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43469	Soybean	mitochondrion	95.68	95.56
KRH32998	Soybean	cytosol	72.35	73.53
KRH71900	Soybean	endoplasmic reticulum	72.22	73.49
KRH67030	Soybean	endoplasmic reticulum, mitochondrion, nucleus	68.27	71.35
KRG95352	Soybean	endoplasmic reticulum	67.65	70.71
KRH32992	Soybean	cytosol	67.41	70.63
KRH23178	Soybean	cytosol	66.91	69.94
KRH29670	Soybean	cytosol	67.04	69.88
KRH10160	Soybean	cytosol	66.42	69.51
KRH36455	Soybean	cytosol	87.28	59.92
VIT_13s0064g01380.t01	Wine grape	cytosol	81.85	59.89
Solyc01g086720.2.1	Tomato	cytosol	80.25	59.8
KRH27512	Soybean	cytosol	87.04	59.75
KRH65054	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	18.15	59.27
PGSC0003DMT400065015	Potato	cytosol	80.74	58.65
CDX86328	Canola	cytosol	73.33	58.29
AT5G48060.1	Thale cress	cytosol	73.58	57.53
Bra037512.1-P	Field mustard	cytosol	74.07	56.39
KRH77531	Soybean	plasma membrane	64.2	53.66
KRH48448	Soybean	cytosol	46.42	53.11
KRH27936	Soybean	cytosol	63.95	51.49
KRH39245	Soybean	cytosol	47.41	51.2
KRH23748	Soybean	nucleus	61.36	49.21
KRH44923	Soybean	nucleus	60.86	48.33
KRH43466	Soybean	plasma membrane	13.09	47.11
KRH48167	Soybean	endoplasmic reticulum, nucleus	56.79	45.91
KRH65087	Soybean	endoplasmic reticulum, mitochondrion, nucleus	56.67	45.76
KRH40482	Soybean	cytosol	55.68	44.39
KRH15602	Soybean	plasma membrane	42.22	44.13
KRH00708	Soybean	cytosol	55.19	43.95
KRH56956	Soybean	mitochondrion	50.37	39.8
KRH57988	Soybean	cytosol	46.54	38.79
KRH04520	Soybean	cytosol	46.54	38.2
KRH17620	Soybean	cytosol	45.43	36.47
KRH17608	Soybean	cytosol	8.64	18.04

Protein Annotations

EntrezGene:100785340	Gene3D:2.60.40.150	MapMan:35.1	EMBL:ACUP02009798	InterPro:C2_dom	InterPro:C2_domain_sf
EnsemblPlantsGene:GLYMA_15G271400	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000008	InterPro:IPR035892
UniProt:K7ME62	EnsemblPlants:KRH13902	ProteinID:KRH13902	ProteinID:KRH13902.1	PFAM:PF00168	PFAM:PF08372
InterPro:PRibTrfase_C	PFscan:PS50004	PANTHER:PTHR10024	PANTHER:PTHR10024:SF201	SMART:SM00239	SUPFAM:SSF49562
TMHMM:TMhelix	UniParc:UPI00023D6CA6	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:50861709..50865419

Molecular Weight (calculated)

93315.8 Da

IEP (calculated)

9.655

GRAVY (calculated)

-0.303

Length

810 amino acids

Sequence
(BLAST)

001: MISIKRRQRG APVTMHSVGP QVHPSSQDED YNLRETDPQL GGDRWPNARR GWIGGERFSS TYDLVEQMFY LYVRVVKAKD LSPSTLTSSC DPYVEVKLGN
101: YKGRTKHIEK KTNPEWNQVY AFSKDRIQSS VLEVIVKDKE MLGRDDYIGR VAFDLNEVPT RVPPDSPLAP QWYRLEDRRG EGKVRGDIML AVWMGTQADE
201: AFSEAWHSDA AAVSGEGVFN VRSKVYVSPK LWYLRVNAIE AQDVIPSDRN RLPEVFVKAQ MGSQVLRTKI CPTRTTTPLW NEDLVFVAAE PFEEQLTITV
301: EDRVHPSRDE VLGKIILPLT LFEKRLDHRP VHSRWFNLEK FGFGMMEADR RNELKFSSRI HLRISLEGGY HVLDESTLYS SDQRPTARQL WKQPIGVLEV
401: GILGAQGLLP MKMRDGRGTT DAYCVAKYGQ KWVRTRTILD NFSPKWNEQY TWEIYDPCTV ITLGVFDNCH LGGGEKATAG TAARDSRIGK VRIRLSTLEA
501: HRIYTHSHPL LVLHPHGVKK MGELQLAVRF TSLSLANMVY IYGQPLLPKQ HYLRPFIVNQ VENLRYQAMS IVAVRLGRAE PPLRKEVVEY MLDVDSHMWS
601: MRRSKANFFR IMSLFSGIIT MGQWFSQVCH WKNPITSILV HILFLILICY PELILPTLFL YMFLIGLWNY RFRPRHPPHM DTKLSWAEVV HPDELDEEFD
701: TFPTSRPHDV VKMRYDRLRS VAGRIQTVVG DIATQGERFQ SLLSWRDPRA TSFFVVFSLC SAVVLYATPP KVVAMVTGLY YLRHPKFRSK LPSVPSNFFK
801: RLPARTDSML

Best Arabidopsis Sequence Match ( AT5G06850.1 )
(BLAST)

001: MAAKDGAKSQ EDYKLKDMKP ELGERWPHGG QRGGTGWIGS ERAASTYDLV EQMFYLYVRV VKAKDLPPNP VTSNCDPYVE VKIGNYKGKT KHFEKRTNPE
101: WNQVFAFSKD KVQSSTVEVF VRDKEMVTRD EYIGKVVFDM REVPTRVPPD SPLAPQWYRL EDRRGESKKR GEVMVAVWLG TQADEAFPDA WHSDASSVQG
201: EGVQSVRSKV YVSPKLWYLR VNVIEAQDVE PSDRSQPPQA FVKVQVGNQI LKTKLCPNKT TNPMWNEDLV FVAAEPFEEQ FFLTVENKVT PAKDEVMGRL
301: ISPLSVFEKR LDHRAVHSKW YNLEKFGFGA LEGDKRHELK FSSRIHLRVC LEGGYHVMDE STLYISDVKP TARQLWKSPI GILEVGILSA QGLSPMKTKD
401: GKATTDPYCV AKYGQKWVRT RTIIDSSSPK WNEQYTWEVY DPCTVITLGV FDNCHLGGSE KSNSGAKVDS RIGKVRIRLS TLEADRIYTH SYPLLVLQTK
501: GLKKMGEVQL AVRFTCLSLA HMIYLYGHPL LPKMHYLHPF TVNQLDSLRY QAMSIVAARL SRAEPPLRKE NVEYMLDVDS HMWSMRRSKA NFFRIVSVFA
601: GLIAMSKWLG DVCYWKNPLT TILFHVLFFI LICYPELILP TTFLYMFLIG LWNFRFRPRH PAHMDTKVSW AEAASPDELD EEFDTFPTSK GQDVVKMRYD
701: RLRSVAGRIQ MVVGDIATQG ERFQALLSWR DPRATCLFVI FCLVAAMILY VTPFKIIALA GGMFWMRHPK FRSKMPSAPS NFFRKLPSKA DCML

Arabidopsis Description

FTIP1FT-interacting protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.