Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
18260611
plastid: 27992503 |
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d001785_P001 | Maize | plasma membrane | 91.79 | 91.7 |
| TraesCS2A01G582000.1 | Wheat | cytosol | 91.99 | 91.54 |
| TraesCS2D01G598200.1 | Wheat | cytosol | 91.89 | 91.44 |
| TraesCS2B01G605000.1 | Wheat | cytosol | 91.89 | 91.44 |
| HORVU2Hr1G123760.1 | Barley | cytosol | 91.59 | 91.14 |
| KXG27468 | Sorghum | cytosol | 91.2 | 91.11 |
| Zm00001d026650_P001 | Maize | cytosol | 89.02 | 87.8 |
| GSMUA_Achr2P03960_001 | Banana | cytosol | 53.51 | 77.51 |
| Solyc08g008020.1.1 | Tomato | plastid | 72.5 | 73.3 |
| PGSC0003DMT400014804 | Potato | cytosol | 72.3 | 73.03 |
| KRH27936 | Soybean | cytosol | 71.61 | 71.97 |
| KRH77531 | Soybean | plasma membrane | 68.35 | 71.31 |
| GSMUA_AchrUn_... | Banana | cytosol | 65.97 | 71.11 |
| Os05t0370600-01 | Rice | plastid | 53.31 | 69.64 |
| GSMUA_Achr1P06800_001 | Banana | cytosol | 45.6 | 68.7 |
| AT4G11610.1 | Thale cress | cytosol | 68.55 | 68.55 |
| CDX86768 | Canola | cytosol | 68.15 | 68.22 |
| Bra035212.1-P | Field mustard | cytosol | 68.05 | 67.98 |
| Os07t0483500-01 | Rice | cytosol | 62.51 | 62.51 |
| Os06t0614000-01 | Rice | cytosol | 49.36 | 60.56 |
| Os05t0429700-01 | Rice | plastid | 46.29 | 58.21 |
| CDY13273 | Canola | cytosol | 26.31 | 57.58 |
| Os04t0472900-01 | Rice | cytosol | 44.31 | 52.4 |
| Os02t0816000-01 | Rice | cytosol | 51.63 | 52.25 |
| Os04t0691800-01 | Rice | plasma membrane | 52.62 | 52.11 |
| Os02t0663900-01 | Rice | cytosol | 38.48 | 49.94 |
| VIT_02s0025g03610.t01 | Wine grape | cytosol | 74.98 | 48.4 |
| Os12t0187500-00 | Rice | cytosol, mitochondrion, peroxisome | 25.42 | 46.73 |
| Os07t0165100-01 | Rice | cytosol, endoplasmic reticulum, peroxisome | 34.82 | 43.03 |
| Os01t0587300-00 | Rice | cytosol | 45.3 | 42.41 |
| Os03t0652000-02 | Rice | cytosol | 12.66 | 30.33 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:35.1 | EntrezGene:4337448 | EMBL:AK102910 | ProteinID:BAF16219.1 | ProteinID:BAS91707.1 |
| InterPro:C2_dom | InterPro:C2_domain_sf | ProteinID:CAE03445.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004601 |
| GO:GO:0004602 | GO:GO:0005575 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 | GO:GO:0098869 |
| InterPro:IPR000008 | InterPro:IPR035892 | EnsemblPlantsGene:Os04g0683800 | EnsemblPlants:Os04t0683800-01 | PFAM:PF00168 | PFAM:PF08372 |
| InterPro:PRibTrfase_C | PFscan:PS50004 | PANTHER:PTHR10024 | PANTHER:PTHR10024:SF225 | UniProt:Q7XPV3 | SMART:SM00239 |
| SUPFAM:SSF49562 | TMHMM:TMhelix | UniParc:UPI00001B178E | RefSeq:XP_015635361.1 | SEG:seg | : |
Description
Similar to Phosphoribosyltransferase (Fragment). (Os04t0683800-01)
Coordinates
chr4:+:34915815..34919982
Molecular Weight (calculated)
114919.0 Da
IEP (calculated)
9.385
GRAVY (calculated)
-0.263
Length
1011 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAYKLGVEV ASAHDLMPKD GQGSASACVE LTFDGQRFRT AIKDKDLNPV WNERFYFNVS DPSNLPELAL EAYVYNINRS IDGSRSFLGK VRIAGTSFVP
0101: FPDAVVMHYP LEKRGMFSRV KGELGLKVYI TNDPSIKASN PLPAMDPVSN NPPPTPAEQI ATDITGTNLS TTHEHRAEVK TLHTIAKEVQ HQHHGHGHLP
0201: ASFPDQPSKY AVDQMKPEPQ QPKIVRMYSA ASQQPMDYAL KETSPFLGGG QVVGGRVIRA EKHASTYDLV ERMQYLFVRV VKARDLPDMD VTGSLDPYVE
0301: VRVGNYRGIT RHFEKQKNPE WNAVFAFSRD RMQATILEVV VKDKDLLKDD FVGLVRFDLN DVPMRVPPDS PLAPEWYRLV HKTGDKSRGE LMLAVWIGTQ
0401: ADEAFPDAWH SDAATLEDPS AVTHMKSKVY HAPRLWYLRV NIIEAQDIAI TDKTRYPDVF VRAQVGHQHG RTKPVQARNF NPFWNEDLMF VAAEPFEDHL
0501: ILSLEDRVAP NKDEVLGRVI IPLTMIDRRA DDRIVHGKWF NLEKPVLIDV DQLKKEKFST RLHLRLCLDG GYHVLDESTN YSSDLRPTAK QLWKPSIGLL
0601: ELGILGAQGI VPMKTRDGKG SSDTYCVAKY GSKWVRTRTI VNNPGPKFNE QYTWEVYDPA TVLTVGVFDN GQLGEKGGEK TSSSKDAKIG KVRIRLSTLE
0701: TGRVYTHSYP LLVLHPSGVK KMGELHLAIR FSSTSLVNMM YLYSRPLLPK MHYVRPIPVL QVDMLRHQAV QIVSARLSRM EPPLRKEVVE YMSDVDSHLW
0801: SMRRSKANFF RLMSVFSGLF AVSKWFNGVC SWRNPITTVL VHILFIMLVC FPELILPTVF LYMFLIGVWN YRYRPCYPPH MNTKISHAEA VHPDELDEEF
0901: DTFPTSRSPD VIRMRYDRLR SVAGRIQTVV GDIATQGERV QALLSWRDPR ATAIFVLFCL IAAIVLYVTP LQVLAALAGF YVMRHPRFRY RLPSTPVNFF
1001: RRLPARTDSM L
0101: FPDAVVMHYP LEKRGMFSRV KGELGLKVYI TNDPSIKASN PLPAMDPVSN NPPPTPAEQI ATDITGTNLS TTHEHRAEVK TLHTIAKEVQ HQHHGHGHLP
0201: ASFPDQPSKY AVDQMKPEPQ QPKIVRMYSA ASQQPMDYAL KETSPFLGGG QVVGGRVIRA EKHASTYDLV ERMQYLFVRV VKARDLPDMD VTGSLDPYVE
0301: VRVGNYRGIT RHFEKQKNPE WNAVFAFSRD RMQATILEVV VKDKDLLKDD FVGLVRFDLN DVPMRVPPDS PLAPEWYRLV HKTGDKSRGE LMLAVWIGTQ
0401: ADEAFPDAWH SDAATLEDPS AVTHMKSKVY HAPRLWYLRV NIIEAQDIAI TDKTRYPDVF VRAQVGHQHG RTKPVQARNF NPFWNEDLMF VAAEPFEDHL
0501: ILSLEDRVAP NKDEVLGRVI IPLTMIDRRA DDRIVHGKWF NLEKPVLIDV DQLKKEKFST RLHLRLCLDG GYHVLDESTN YSSDLRPTAK QLWKPSIGLL
0601: ELGILGAQGI VPMKTRDGKG SSDTYCVAKY GSKWVRTRTI VNNPGPKFNE QYTWEVYDPA TVLTVGVFDN GQLGEKGGEK TSSSKDAKIG KVRIRLSTLE
0701: TGRVYTHSYP LLVLHPSGVK KMGELHLAIR FSSTSLVNMM YLYSRPLLPK MHYVRPIPVL QVDMLRHQAV QIVSARLSRM EPPLRKEVVE YMSDVDSHLW
0801: SMRRSKANFF RLMSVFSGLF AVSKWFNGVC SWRNPITTVL VHILFIMLVC FPELILPTVF LYMFLIGVWN YRYRPCYPPH MNTKISHAEA VHPDELDEEF
0901: DTFPTSRSPD VIRMRYDRLR SVAGRIQTVV GDIATQGERV QALLSWRDPR ATAIFVLFCL IAAIVLYVTP LQVLAALAGF YVMRHPRFRY RLPSTPVNFF
1001: RRLPARTDSM L
0001: MMMSNLKLGV DVIGAHNLFP KDGQGTSNAY VELYFDGQKH RTTIKDRDLN PVWNESFFFN ISDPSRLHYL NLEAQAYSHN RSTNGRSFLG KVSLSGTSFV
0101: PHSDAVVLHF PMERRGIFSR VRGELGLKVY ITDEASLKSS AASNDHPDNL DPALPREHRS DKRHVFYNLP NSAQEHQHQH PQGPNQSSSL AAEQDNHNEH
0201: HHHYVPKHQV DEMRSEPARP SKLVHAHSIA SAQPADFALK ETSPHLGGGR VVGGRVIHKD KTATSTYDLV ERMYFLYVRV VKARELPIMD ITGSVDPFVE
0301: VRVGNYKGIT RHFEKRQHPE WNQVFAFAKE RMQASVLEVV VKDKDLLKDD YVGFVRFDIN DVPLRVPPDS PLAPQWYRLE DKKGEKIKGE LMLAVWIGTQ
0401: ADEAFSDAWH SDAAMPVDCS PAISAVLRSK VYHAPRLWYV RVNVIEAQDL IPTDKTRFPD VYVKAQLGNQ VMKTRPCQAR TLGAVWNEDF LFVVAEPFED
0501: HLVLTVEDRV APGKDEIVGR TYIPLNTVEK RADDHMIHAR WYNLERPVIV DVDQLKREKF SMRIHLRVCL EGGYHVLDES THYSSDLRPS ARPLWRQPIG
0601: VLELGILNAV GLHPMKTREG RGTSDTFCVG KYGQKWVRTR TMVDNLCPKY NEQYTWEVFD PATVLTVGVF DNGQLGEKGN RDVKIGKIRI RLSTLETGRI
0701: YTHSYPLLVL HPTGVKKMGE LHMAVRFTCI SFANMLYQYS KPLLPKMHYV RPFSVMQQDM LRHQAVNIVA ARLGRAEPPL RKEIIEFMSD TDSHLWSMRK
0801: SKANFFRMMT VFSGVIAVGK WFSDICSWRN PITTVLVHVL FLMLVCLPEL ILPTMFLYMF LIGLWNYRFR PRYPPHMNTK ISQAEAVHPD ELDEEFDTFP
0901: TTRNPDMVRL RYDRLRSVAG RIQTVIGDLA TQGERFQALL SWRDPRATAI FVILCFIAAI VFFITPIQIV VALAGFFTMR HPRFRHRLPS VPVNFFRRLP
1001: ARTDSML
0101: PHSDAVVLHF PMERRGIFSR VRGELGLKVY ITDEASLKSS AASNDHPDNL DPALPREHRS DKRHVFYNLP NSAQEHQHQH PQGPNQSSSL AAEQDNHNEH
0201: HHHYVPKHQV DEMRSEPARP SKLVHAHSIA SAQPADFALK ETSPHLGGGR VVGGRVIHKD KTATSTYDLV ERMYFLYVRV VKARELPIMD ITGSVDPFVE
0301: VRVGNYKGIT RHFEKRQHPE WNQVFAFAKE RMQASVLEVV VKDKDLLKDD YVGFVRFDIN DVPLRVPPDS PLAPQWYRLE DKKGEKIKGE LMLAVWIGTQ
0401: ADEAFSDAWH SDAAMPVDCS PAISAVLRSK VYHAPRLWYV RVNVIEAQDL IPTDKTRFPD VYVKAQLGNQ VMKTRPCQAR TLGAVWNEDF LFVVAEPFED
0501: HLVLTVEDRV APGKDEIVGR TYIPLNTVEK RADDHMIHAR WYNLERPVIV DVDQLKREKF SMRIHLRVCL EGGYHVLDES THYSSDLRPS ARPLWRQPIG
0601: VLELGILNAV GLHPMKTREG RGTSDTFCVG KYGQKWVRTR TMVDNLCPKY NEQYTWEVFD PATVLTVGVF DNGQLGEKGN RDVKIGKIRI RLSTLETGRI
0701: YTHSYPLLVL HPTGVKKMGE LHMAVRFTCI SFANMLYQYS KPLLPKMHYV RPFSVMQQDM LRHQAVNIVA ARLGRAEPPL RKEIIEFMSD TDSHLWSMRK
0801: SKANFFRMMT VFSGVIAVGK WFSDICSWRN PITTVLVHVL FLMLVCLPEL ILPTMFLYMF LIGLWNYRFR PRYPPHMNTK ISQAEAVHPD ELDEEFDTFP
0901: TTRNPDMVRL RYDRLRSVAG RIQTVIGDLA TQGERFQALL SWRDPRATAI FVILCFIAAI VFFITPIQIV VALAGFFTMR HPRFRHRLPS VPVNFFRRLP
1001: ARTDSML
Arabidopsis Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q84TJ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.