Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- cytosol 2
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0370600-01 | Rice | plastid | 45.82 | 32.56 |
| Os06t0614000-01 | Rice | cytosol | 43.82 | 29.25 |
| Os05t0429700-01 | Rice | plastid | 41.45 | 28.36 |
| Os02t0663900-01 | Rice | cytosol | 38.0 | 26.83 |
| Os04t0472900-01 | Rice | cytosol | 40.0 | 25.73 |
| Os04t0683800-01 | Rice | plasma membrane, plastid | 46.73 | 25.42 |
| Os07t0165100-01 | Rice | cytosol, endoplasmic reticulum, peroxisome | 37.64 | 25.31 |
| TraesCS3D01G399900.1 | Wheat | cytosol, plasma membrane | 40.36 | 24.64 |
| Os07t0483500-01 | Rice | cytosol | 44.91 | 24.43 |
| TraesCS3A01G404600.1 | Wheat | cytosol | 40.0 | 24.1 |
| Os02t0816000-01 | Rice | cytosol | 43.64 | 24.02 |
| TraesCS3B01G438300.1 | Wheat | plastid | 40.36 | 22.22 |
| Os04t0691800-01 | Rice | plasma membrane | 40.91 | 22.04 |
| Os01t0587300-00 | Rice | cytosol | 38.0 | 19.35 |
| Os03t0652000-02 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os12t0187500-00 | EnsemblPlantsGene:Os12g0187500 | Gene3D:2.60.40.150 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:C2_dom | InterPro:C2_domain_sf | InterPro:IPR000008 | InterPro:IPR035892 | InterPro:PRibTrfase_C | PANTHER:PTHR31425 |
| PANTHER:PTHR31425:SF4 | PFAM:PF00168 | PFAM:PF08372 | ProteinID:BAT16183.1 | SEG:seg | SMART:SM00239 |
| SUPFAM:SSF49562 | TMHMM:TMhelix | UniParc:UPI0003939823 | UniProt:A0A0P0Y7S4 | MapMan:35.1 | : |
Description
Similar to C2 domain containing protein. (Os12t0187500-00)
Coordinates
chr12:+:4398326..4399978
Molecular Weight (calculated)
63019.5 Da
IEP (calculated)
9.438
GRAVY (calculated)
-0.165
Length
550 amino acids
Sequence
(BLAST)
(BLAST)
001: GNRFRGLGHL EVGKQRTTSG SYEWKEDLLF VAAEPFFEDD LELHVIVANP GKDEVVIGQQ TVPLSSIVKG GDEHDHFDVM PSKWFDLKNP DKPQFDSSVD
101: DGNDNSSRMR ICLKNMLDGR YRIVHDSKGY MDDTRPADRK LWRPPVGRVH LGILRATGLP LRMGKSTVNP YCVAKYGDKW VRTRTILDGP EHVFNEQHTW
201: SVYDIATVLT AGVFDHFPHT RKAHREIGKV QIHLSCLETD RVYAHSYPLI ILNRRGFKKA GELQIAVKLS SESFISLLGM YARSTLPKMH YEHPLTVMEE
301: DKFRSEVAEV MALRFSRVEP PLRSEIVAYM CNATGGTSCW SMRKSKVNFF RLMQVASPFI HLFQSVTSWK NPAVALISCV IFVLALCFHK LVLSMVIIYF
401: VLVALWNYRF RPRKPPFFDH KVSCLGSVHP DEIDEEFDSV ESSCSIDLVR MRYDRLRSVA GRVQTVVGDV ATQGERIQSL LCWRDPRATA IFQFIIVMVS
501: IVVYFVPKKV LVGIAGFYIM RHPRFRKKNN TPSIVENFFR RLPDKQGTLI
101: DGNDNSSRMR ICLKNMLDGR YRIVHDSKGY MDDTRPADRK LWRPPVGRVH LGILRATGLP LRMGKSTVNP YCVAKYGDKW VRTRTILDGP EHVFNEQHTW
201: SVYDIATVLT AGVFDHFPHT RKAHREIGKV QIHLSCLETD RVYAHSYPLI ILNRRGFKKA GELQIAVKLS SESFISLLGM YARSTLPKMH YEHPLTVMEE
301: DKFRSEVAEV MALRFSRVEP PLRSEIVAYM CNATGGTSCW SMRKSKVNFF RLMQVASPFI HLFQSVTSWK NPAVALISCV IFVLALCFHK LVLSMVIIYF
401: VLVALWNYRF RPRKPPFFDH KVSCLGSVHP DEIDEEFDSV ESSCSIDLVR MRYDRLRSVA GRVQTVVGDV ATQGERIQSL LCWRDPRATA IFQFIIVMVS
501: IVVYFVPKKV LVGIAGFYIM RHPRFRKKNN TPSIVENFFR RLPDKQGTLI
001: MQRPPPEDFS LKETRPHLGG GKLSGDKLTS TYDLVEQMQY LYVRVVKAKE LPGKDMTGSC DPYVEVKLGN YKGTTRHFEK KSNPEWNQVF AFSKDRIQAS
101: FLEATVKDKD FVKDDLIGRV VFDLNEVPKR VPPDSPLAPQ WYRLEDRKGD KVKGELMLAV WFGTQADEAF PEAWHSDAAT VSGTDALANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPTDKQR YPEVYVKAIV GNQALRTRVS QSRTINPMWN EDLMFVAAEP FEEPLILSVE DRVAPNKDEV LGRCAIPLQY LDRRFDHKPV
301: NSRWYNLEKH IMVDGEKKET KFASRIHMRI CLEGGYHVLD ESTHYSSDLR PTAKQLWKPN IGVLELGILN ATGLMPMKTK DGRGTTDAYC VAKYGQKWIR
401: TRTIIDSFTP RWNEQYTWEV FDPCTVVTVG VFDNCHLHGG EKIGGAKDSR IGKVRIRLST LETDRVYTHS YPLLVLHPNG VKKMGEIHLA VRFTCSSLLN
501: MMYMYSQPLL PKMHYIHPLT VSQLDNLRHQ ATQIVSMRLT RAEPPLRKEV VEYMLDVGSH MWSMRRSKAN FFRIMGVLSG LIAVGKWFEQ ICNWKNPITT
601: VLIHLLFIIL VLYPELILPT IFLYLFLIGI WYYRWRPRHP PHMDTRLSHA DSAHPDELDE EFDTFPTSRP SDIVRMRYDR LRSIAGRIQT VVGDLATQGE
701: RLQSLLSWRD PRATALFVLF CLIAAVILYV TPFQVVALCI GIYALRHPRF RYKLPSVPLN FFRRLPARTD CML
101: FLEATVKDKD FVKDDLIGRV VFDLNEVPKR VPPDSPLAPQ WYRLEDRKGD KVKGELMLAV WFGTQADEAF PEAWHSDAAT VSGTDALANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPTDKQR YPEVYVKAIV GNQALRTRVS QSRTINPMWN EDLMFVAAEP FEEPLILSVE DRVAPNKDEV LGRCAIPLQY LDRRFDHKPV
301: NSRWYNLEKH IMVDGEKKET KFASRIHMRI CLEGGYHVLD ESTHYSSDLR PTAKQLWKPN IGVLELGILN ATGLMPMKTK DGRGTTDAYC VAKYGQKWIR
401: TRTIIDSFTP RWNEQYTWEV FDPCTVVTVG VFDNCHLHGG EKIGGAKDSR IGKVRIRLST LETDRVYTHS YPLLVLHPNG VKKMGEIHLA VRFTCSSLLN
501: MMYMYSQPLL PKMHYIHPLT VSQLDNLRHQ ATQIVSMRLT RAEPPLRKEV VEYMLDVGSH MWSMRRSKAN FFRIMGVLSG LIAVGKWFEQ ICNWKNPITT
601: VLIHLLFIIL VLYPELILPT IFLYLFLIGI WYYRWRPRHP PHMDTRLSHA DSAHPDELDE EFDTFPTSRP SDIVRMRYDR LRSIAGRIQT VVGDLATQGE
701: RLQSLLSWRD PRATALFVLF CLIAAVILYV TPFQVVALCI GIYALRHPRF RYKLPSVPLN FFRRLPARTD CML
Arabidopsis Description
Anthranilate phosphoribosyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M2R0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.