Factsheet for Os05t0494000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 6
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0226300-01
Os01t0736900-01
Os01t0819300-01
Os01t0820000-00	endoplasmic reticulum
Os01t0859200-01
Os02t0265900-01
Os02t0640300-01
Os02t0643000-01
Os03t0136200-01
Os03t0421400-01
Os03t0568400-00
Os04t0534400-01
Os05t0370600-01
Os05t0494000-01	endoplasmic reticulum
Os05t0526400-01
Os06t0503400-01
Os07t0293000-00
Os08t0156700-01
Os10t0196100-00	endoplasmic reticulum
Os10t0502500-04
Os10t0502600-01
Os10t0518200-01
Os12t0152100-01
Os12t0152500-00
Os12t0512800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40890.1	Os03t0136200-01	AT1G20330.1	23175744
AT2G40890.1	Os05t0370600-01	AT1G51570.1	23175744
AT2G40890.1	Os01t0226300-01	AT1G64090.2	23175744
AT2G40890.1	Os01t0736900-01	AT1G64090.2	23175744
AT2G40890.1	Os02t0265900-01	AT1G64090.2	23175744
AT2G40890.1	Os05t0526400-01	AT1G64090.2	23175744
AT2G40890.1	Os06t0503400-01	AT1G64090.2	23175744
AT2G40890.1	Os03t0421400-01	AT2G03510.1	23175744
AT2G40890.1	Os01t0819300-01	AT2G20990.3	23175744
AT2G40890.1	Os01t0820000-00	AT2G30490.1	23175744
AT2G40890.1	Os01t0820000-00	AT2G30490.1	23175744
AT2G40890.1	Os05t0494000-01	AT2G40890.1	23175744
AT2G40890.1	Os10t0196100-00	AT2G40890.1	23175744
AT2G40890.1	Os02t0643000-01	AT2G45140.1	23175744
AT2G40890.1	Os04t0534400-01	AT2G45140.1	23175744
AT2G40890.1	Os08t0156700-01	AT2G45140.1	23175744
AT2G40890.1	Os01t0226300-01	AT2G46170.1	23175744
AT2G40890.1	Os01t0736900-01	AT2G46170.1	23175744
AT2G40890.1	Os02t0265900-01	AT2G46170.1	23175744
AT2G40890.1	Os05t0526400-01	AT2G46170.1	23175744
AT2G40890.1	Os06t0503400-01	AT2G46170.1	23175744
AT2G40890.1	Os03t0568400-00	AT3G26830.1	23175744
AT2G40890.1	Os07t0293000-00	AT3G26830.1	23175744
AT2G40890.1	Os12t0512800-01	AT3G26830.1	23175744
AT2G40890.1	Os10t0502500-04	AT3G48890.1	23175744
AT2G40890.1	Os01t0859200-01	AT5G22460.1	23175744
AT2G40890.1	Os12t0152100-01	AT5G22460.1	23175744
AT2G40890.1	Os12t0152500-00	AT5G22460.1	23175744
AT2G40890.1	Os01t0226300-01	AT5G41600.1	23175744
AT2G40890.1	Os01t0736900-01	AT5G41600.1	23175744
AT2G40890.1	Os02t0265900-01	AT5G41600.1	23175744
AT2G40890.1	Os05t0526400-01	AT5G41600.1	23175744
AT2G40890.1	Os06t0503400-01	AT5G41600.1	23175744
AT2G40890.1	Os02t0640300-01	AT5G52240.1	23175744
AT2G40890.1	Os10t0502600-01	AT5G52240.1	23175744
AT2G40890.1	Os10t0518200-01	AT5G53560.1	23175744

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18431	Sorghum	endoplasmic reticulum	89.26	89.26
Zm00001d038555_P001	Maize	plasma membrane	88.87	88.87
TraesCS1B01G321800.1	Wheat	endoplasmic reticulum	88.67	88.67
HORVU1Hr1G068030.1	Barley	endoplasmic reticulum	88.87	88.52
TraesCS1A01G310500.1	Wheat	golgi	88.48	88.48
HORVU0Hr1G031710.1	Barley	endoplasmic reticulum	88.67	88.33
TraesCS1D01G310000.1	Wheat	endoplasmic reticulum	88.28	88.28
TraesCS5A01G554000.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	83.98	84.31
TraesCSU01G032400.1	Wheat	endoplasmic reticulum	43.16	81.85
TraesCS4B01G393700.1	Wheat	extracellular, golgi	74.02	79.96
TraesCSU01G032500.1	Wheat	cytosol, plasma membrane, plastid	80.27	76.39
Os10t0196100-00	Rice	mitochondrion	34.96	74.58
GSMUA_Achr8P24010_001	Banana	endoplasmic reticulum, extracellular	66.6	71.04
PGSC0003DMT400008504	Potato	cytosol	28.71	70.67
KRH66683	Soybean	extracellular, golgi	67.77	68.17
Solyc10g078240.1.1	Tomato	endoplasmic reticulum, extracellular	67.58	67.98
PGSC0003DMT400018493	Potato	endoplasmic reticulum, extracellular	67.38	67.91
VIT_08s0040g00780.t01	Wine grape	extracellular, golgi	66.8	67.32
KRG95042	Soybean	mitochondrion	66.8	67.19
CDY35432	Canola	endoplasmic reticulum, extracellular, vacuole	66.6	67.13
AT2G40890.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	66.41	66.93
Bra000211.1-P	Field mustard	endoplasmic reticulum, extracellular	66.21	66.73
CDY06955	Canola	endoplasmic reticulum	66.21	66.73
CDY14751	Canola	endoplasmic reticulum	66.02	66.54
Solyc01g096670.2.1	Tomato	endoplasmic reticulum, extracellular	66.21	65.95
Bra016964.1-P	Field mustard	endoplasmic reticulum	63.09	65.52
Bra004591.1-P	Field mustard	endoplasmic reticulum, extracellular	64.45	65.09
CDX79965	Canola	endoplasmic reticulum, extracellular, vacuole	64.26	64.89
CDY23876	Canola	endoplasmic reticulum, extracellular	63.67	64.3
CDY22488	Canola	cytosol, mitochondrion	44.34	64.12
PGSC0003DMT400075164	Potato	cytosol	54.1	61.42
PGSC0003DMT400038205	Potato	extracellular, golgi	60.16	60.75
Solyc01g009370.1.1	Tomato	extracellular, golgi	59.96	60.55
PGSC0003DMT400038202	Potato	extracellular, golgi	59.96	60.55
PGSC0003DMT400018494	Potato	endoplasmic reticulum, extracellular	59.57	59.92
Solyc10g078220.1.1	Tomato	endoplasmic reticulum	58.2	58.89
Solyc10g078230.1.1	Tomato	endoplasmic reticulum, extracellular	58.4	58.74
PGSC0003DMT400018497	Potato	endoplasmic reticulum, golgi	50.2	57.75
GSMUA_Achr4P10110_001	Banana	endoplasmic reticulum, golgi	41.02	54.83
PGSC0003DMT400018498	Potato	endoplasmic reticulum, golgi	31.05	51.29
Os09t0441625-00	Rice	cytosol	20.31	40.78
Os09t0441100-01	Rice	endoplasmic reticulum	37.89	36.95
Os10t0320100-01	Rice	plasma membrane	37.11	36.12
Os08t0456200-00	Rice	plasma membrane	36.33	35.77
Os09t0264400-01	Rice	endoplasmic reticulum, golgi	36.13	35.65
Os09t0441400-01	Rice	plasma membrane	35.35	35.21
Os10t0317900-01	Rice	plasma membrane	36.72	35.14
Os09t0441700-00	Rice	plasma membrane	35.35	34.09
Os08t0131100-01	Rice	endoplasmic reticulum	32.42	31.62
Os09t0441600-00	Rice	plasma membrane	16.6	25.37
Os02t0503100-00	Rice	plasma membrane	27.73	24.57
Os03t0650200-00	Rice	endoplasmic reticulum	19.53	17.01

Protein Annotations

Gene3D:1.10.630.10	MapMan:21.6.1.2	EntrezGene:4339188	ProteinID:BAF17836.1	ProteinID:BAS94686.1	InterPro:Cyt_P450
InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009809	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016705
GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396
EnsemblPlantsGene:Os05g0494000	EnsemblPlants:Os05t0494000-01	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086
PANTHER:PTHR24298	PANTHER:PTHR24298:SF0	UniProt:Q0DH37	SUPFAM:SSF48264	UniParc:UPI0000E12557	RefSeq:XP_015639951.1
SEG:seg	:	:	:	:	:

Description

p-coumaroyl shikimate/quinate 3-hydroxylase 1Similar to Cytochrome P450 98A1 (EC 1.14.-.-). (Os05t0494000-01)

Coordinates

chr5:+:24271090..24275144

Molecular Weight (calculated)

58362.0 Da

IEP (calculated)

9.200

GRAVY (calculated)

-0.237

Length

512 amino acids

Sequence
(BLAST)

001: MDVASLLPFA LALVAIPISL ALLDRLRLGR IPPGPRPWPM VGNLWQIKPV RCRGFLEWAE RYGPIVSVWF GSSLNVVVST SELAKEVLKE NDQLLADRPR
101: NRSTQRFSRN GMDLIWADYG PHYIKVRKLC NLELFTPKRL EALRPIREDE VTAMVESVHR AVTQPGSEHK PIVVRNHLAM VAFNNITRLA FGKRFMNANG
201: DIDEQGREFK TIVNNGIKIG ASLSVAEYIW YLRWLCPLNE ELYKTHNERR DRLTKKIIDE HAKALKESGA KQHFVDALFT LREQYDLSDD TVIGLLWDMI
301: TAGMDTTVIS VEWAMAELVR NPRVQKKLQE ELDRVVGRDR VMSETDFQSL PYLNAVVKES LRLHPPTPLM LPHKASTNVK IGGYNIPKGA NVMVNVWAIA
401: RDPKVWSNPL EYRPERFIEE NIDIKGSDFR VLPFGAGRRV CPGAQLGINL VASMIGHLLH QFEWSLPEGT RPEDVNMMES NGVVTFMSTS LQVIAKPRLD
501: NPDLYKRFPV EM

Best Arabidopsis Sequence Match ( AT2G40890.1 )
(BLAST)

001: MSWFLIAVAT IAAVVSYKLI QRLRYKFPPG PSPKPIVGNL YDIKPVRFRC YYEWAQSYGP IISVWIGSIL NVVVSSAELA KEVLKEHDQK LADRHRNRST
101: EAFSRNGQDL IWADYGPHYV KVRKVCTLEL FTPKRLESLR PIREDEVTAM VESVFRDCNL PENRAKGLQL RKYLGAVAFN NITRLAFGKR FMNAEGVVDE
201: QGLEFKAIVS NGLKLGASLS IAEHIPWLRW MFPADEKAFA EHGARRDRLT RAIMEEHTLA RQKSSGAKQH FVDALLTLKD QYDLSEDTII GLLWDMITAG
301: MDTTAITAEW AMAEMIKNPR VQQKVQEEFD RVVGLDRILT EADFSRLPYL QCVVKESFRL HPPTPLMLPH RSNADVKIGG YDIPKGSNVH VNVWAVARDP
401: AVWKNPFEFR PERFLEEDVD MKGHDFRLLP FGAGRRVCPG AQLGINLVTS MMSHLLHHFV WTPPQGTKPE EIDMSENPGL VTYMRTPVQA VATPRLPSDL
501: YKRVPYDM

Arabidopsis Description

CYP98A3Cytochrome P450 98A3 [Source:UniProtKB/Swiss-Prot;Acc:O22203]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.