Factsheet for Solyc10g078230.1.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g009370.1.1	endoplasmic reticulum
Solyc01g095200.2.1
Solyc01g111520.2.1
Solyc01g111830.2.1
Solyc02g044030.1.1
Solyc03g025950.2.1
Solyc03g082600.2.1
Solyc05g008680.1.1
Solyc05g012340.2.1
Solyc08g081730.2.1
Solyc10g011870.2.1
Solyc10g055680.1.1
Solyc10g078220.1.1	endoplasmic reticulum
Solyc10g078230.1.1	endoplasmic reticulum
Solyc10g078240.1.1	endoplasmic reticulum
Solyc10g078680.1.1
Solyc10g080420.1.1
Solyc10g080430.1.1
Solyc11g067260.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40890.1	Solyc01g111830.2.1	AT1G20330.1	23175744
AT2G40890.1	Solyc05g008680.1.1	AT1G20330.1	23175744
AT2G40890.1	Solyc10g055680.1.1	AT1G20330.1	23175744
AT2G40890.1	Solyc02g044030.1.1	AT1G51570.1	23175744
AT2G40890.1	Solyc10g078680.1.1	AT1G51570.1	23175744
AT2G40890.1	Solyc10g080420.1.1	AT1G51570.1	23175744
AT2G40890.1	Solyc10g080430.1.1	AT1G51570.1	23175744
AT2G40890.1	Solyc08g081730.2.1	AT1G64090.2	23175744
AT2G40890.1	Solyc05g012340.2.1	AT2G03510.1	23175744
AT2G40890.1	Solyc01g111520.2.1	AT2G20990.3	23175744
AT2G40890.1	Solyc01g009370.1.1	AT2G40890.1	23175744
AT2G40890.1	Solyc10g078220.1.1	AT2G40890.1	23175744
AT2G40890.1	Solyc10g078230.1.1	AT2G40890.1	23175744
AT2G40890.1	Solyc10g078240.1.1	AT2G40890.1	23175744
AT2G40890.1	Solyc01g095200.2.1	AT2G46170.1	23175744
AT2G40890.1	Solyc10g011870.2.1	AT2G46170.1	23175744
AT2G40890.1	Solyc03g025950.2.1	AT3G48890.1	23175744
AT2G40890.1	Solyc11g067260.1.1	AT5G22460.1	23175744
AT2G40890.1	Solyc08g081730.2.1	AT5G41600.1	23175744
AT2G40890.1	Solyc03g082600.2.1	AT5G53560.1	23175744

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400018494	Potato	endoplasmic reticulum, extracellular	93.12	93.12
PGSC0003DMT400075164	Potato	cytosol	82.12	92.68
Solyc10g078220.1.1	Tomato	endoplasmic reticulum	88.41	88.93
Solyc01g009370.1.1	Tomato	extracellular, golgi	74.85	75.15
Solyc10g078240.1.1	Tomato	endoplasmic reticulum, extracellular	72.5	72.5
GSMUA_Achr8P24010_001	Banana	endoplasmic reticulum, extracellular	60.51	64.17
AT2G40890.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	63.85	63.98
CDY35432	Canola	endoplasmic reticulum, extracellular, vacuole	63.46	63.58
CDY06955	Canola	endoplasmic reticulum	63.26	63.39
Bra000211.1-P	Field mustard	endoplasmic reticulum, extracellular	63.06	63.19
CDY14751	Canola	endoplasmic reticulum	63.06	63.19
Solyc01g096670.2.1	Tomato	endoplasmic reticulum, extracellular	63.46	62.84
CDY23876	Canola	endoplasmic reticulum, extracellular	62.48	62.72
CDY22488	Canola	cytosol, mitochondrion	43.61	62.71
CDX79965	Canola	endoplasmic reticulum, extracellular, vacuole	61.89	62.13
Bra004591.1-P	Field mustard	endoplasmic reticulum, extracellular	61.69	61.93
Bra016964.1-P	Field mustard	endoplasmic reticulum	59.73	61.66
Os10t0196100-00	Rice	mitochondrion	28.68	60.83
Zm00001d038555_P001	Maize	plasma membrane	60.9	60.55
EES18431	Sorghum	endoplasmic reticulum	60.71	60.35
HORVU3Hr1G078660.1	Barley	endoplasmic reticulum, extracellular	59.53	59.53
TraesCS3B01G361900.1	Wheat	endoplasmic reticulum	59.53	59.53
TraesCS5A01G554000.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	58.94	58.82
TraesCS3A01G331800.1	Wheat	endoplasmic reticulum	58.74	58.74
TraesCS1A01G310500.1	Wheat	golgi	58.94	58.59
HORVU1Hr1G068030.1	Barley	endoplasmic reticulum	59.14	58.56
TraesCS3D01G325300.1	Wheat	endoplasmic reticulum	58.55	58.55
Os05t0494000-01	Rice	plasma membrane	58.74	58.4
HORVU0Hr1G031710.1	Barley	endoplasmic reticulum	58.94	58.37
TraesCS1D01G310000.1	Wheat	endoplasmic reticulum	58.55	58.2
TraesCS1B01G321800.1	Wheat	endoplasmic reticulum	58.55	58.2
Zm00001d043174_P001	Maize	mitochondrion	57.76	57.31
EES03767	Sorghum	endoplasmic reticulum, extracellular	57.37	56.92
TraesCS4B01G393700.1	Wheat	extracellular, golgi	51.87	55.7
TraesCSU01G032400.1	Wheat	endoplasmic reticulum	27.9	52.59
TraesCSU01G032500.1	Wheat	cytosol, plasma membrane, plastid	55.21	52.23
GSMUA_Achr4P10110_001	Banana	endoplasmic reticulum, golgi	36.54	48.56
Solyc03g115220.2.1	Tomato	extracellular, golgi	37.13	36.77
Solyc03g122360.2.1	Tomato	endoplasmic reticulum, golgi	36.15	36.36
Solyc11g030730.1.1	Tomato	endoplasmic reticulum, golgi	34.38	34.93
Solyc03g122350.2.1	Tomato	endoplasmic reticulum	34.77	34.84
Solyc04g054250.2.1	Tomato	endoplasmic reticulum, extracellular	33.6	34.76
Solyc04g071820.2.1	Tomato	endoplasmic reticulum, golgi	34.38	34.72
Solyc04g071790.1.1	Tomato	golgi	34.18	34.12
Solyc11g066580.1.1	Tomato	endoplasmic reticulum, golgi	33.99	33.86
Solyc04g054260.2.1	Tomato	endoplasmic reticulum, extracellular	33.2	33.8
Solyc04g011690.2.1	Tomato	endoplasmic reticulum, golgi	33.2	33.73
Solyc04g071800.2.1	Tomato	endoplasmic reticulum, golgi	33.2	33.2
Solyc04g071780.2.1	Tomato	endoplasmic reticulum, golgi	33.01	33.2
Solyc04g050620.2.1	Tomato	endoplasmic reticulum	31.83	32.79
Solyc04g054220.2.1	Tomato	extracellular, golgi	31.43	32.39
Solyc04g011680.1.1	Tomato	endoplasmic reticulum, extracellular	31.43	32.06
Solyc12g042480.1.1	Tomato	nucleus	31.24	32.06
Solyc12g045020.1.1	Tomato	endoplasmic reticulum	30.84	31.85
Solyc10g009390.2.1	Tomato	endoplasmic reticulum, extracellular	34.77	31.83
Solyc04g083150.1.1	Tomato	nucleus	31.24	31.67

Protein Annotations

Gene3D:1.10.630.10	MapMan:21.6.1.2	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009809	GO:GO:0009987	GO:GO:0016020
GO:GO:0016491	GO:GO:0016705	GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	UniProt:K4D265	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463
ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF0	SUPFAM:SSF48264	EnsemblPlantsGene:Solyc10g078230.1	EnsemblPlants:Solyc10g078230.1.1
UniParc:UPI000276A0B3	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr10:-:60079511..60081883

Molecular Weight (calculated)

58170.7 Da

IEP (calculated)

8.356

GRAVY (calculated)

-0.230

Length

509 amino acids

Sequence
(BLAST)

001: MAFSLVLSLS ILIIFLCYKL YHRHTAKLPP GPWPWPVVGN LFSLTPIRFR CFAEWAQIYG PIFSFYLGSQ LNVVVSNAEL AKQVLKDNDQ NLANRFRTKP
101: LENVSKNGKD LIWADYGPHY VKVRKVCNLE LFTPKRLEAL RPIREDEVNA MIESIFKDCT KPGNVNKSTM LRGYLGSVAF NNITRLTFGK RFINSQGEVD
201: EQGKEMKSIV TNGIKISGKP NLGEFVPWLR WVFKDDNEAL EAQDKHLDEF TRIIMKEHTI AREKSGETKH HFVDALLTLQ KEYDLSDDSI ISLFWDMIAA
301: GMDTVAITVE WAMAELVRNP RVQQKVQEEL DKVIGSNRII NETDISNLSY LQHVVKESLR MHPPTPLMLP HMASNNVKVG GYNIPKGSIV HVNVWALGRD
401: PNTWKEPLQF RPERFVEEDV DMKGHDYKLL PFGAGRRICP GMNLAINLVT SMLAHLLHHF VWSLPNGVKV EDIDMMESPG TVTYMQTPLH VVPTPRLPRN
501: LYNTCSMNM

Best Arabidopsis Sequence Match ( AT2G40890.1 )
(BLAST)

001: MSWFLIAVAT IAAVVSYKLI QRLRYKFPPG PSPKPIVGNL YDIKPVRFRC YYEWAQSYGP IISVWIGSIL NVVVSSAELA KEVLKEHDQK LADRHRNRST
101: EAFSRNGQDL IWADYGPHYV KVRKVCTLEL FTPKRLESLR PIREDEVTAM VESVFRDCNL PENRAKGLQL RKYLGAVAFN NITRLAFGKR FMNAEGVVDE
201: QGLEFKAIVS NGLKLGASLS IAEHIPWLRW MFPADEKAFA EHGARRDRLT RAIMEEHTLA RQKSSGAKQH FVDALLTLKD QYDLSEDTII GLLWDMITAG
301: MDTTAITAEW AMAEMIKNPR VQQKVQEEFD RVVGLDRILT EADFSRLPYL QCVVKESFRL HPPTPLMLPH RSNADVKIGG YDIPKGSNVH VNVWAVARDP
401: AVWKNPFEFR PERFLEEDVD MKGHDFRLLP FGAGRRVCPG AQLGINLVTS MMSHLLHHFV WTPPQGTKPE EIDMSENPGL VTYMRTPVQA VATPRLPSDL
501: YKRVPYDM

Arabidopsis Description

CYP98A3Cytochrome P450 98A3 [Source:UniProtKB/Swiss-Prot;Acc:O22203]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.