Factsheet for Solyc11g067260.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
vacuole 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400019164	Potato	extracellular, golgi	80.57	91.47
Solyc07g024090.1.1	Tomato	cytosol	22.8	71.54
Solyc07g024080.1.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	15.8	70.93
VIT_06s0080g00310.t01	Wine grape	extracellular	58.81	64.67
KRH26627	Soybean	endoplasmic reticulum, extracellular, golgi	51.81	59.52
AT5G22460.1	Thale cress	endoplasmic reticulum	49.74	56.47
CDY26931	Canola	endoplasmic reticulum, extracellular	49.22	55.88
Bra002413.1-P	Field mustard	endoplasmic reticulum, golgi	48.7	55.29
CDX92349	Canola	endoplasmic reticulum, golgi	48.7	55.29
Os12t0152100-01	Rice	plasma membrane	48.7	54.81
Bra020194.1-P	Field mustard	cytosol	37.05	54.17
CDY09141	Canola	endoplasmic reticulum, golgi	47.41	53.67
Bra006627.1-P	Field mustard	extracellular, golgi	47.41	53.51
CDX88793	Canola	extracellular, golgi	47.41	53.51
TraesCS5A01G128500.2	Wheat	golgi	47.93	53.31
EES15681	Sorghum	golgi, plasma membrane, vacuole	47.93	53.31
Solyc09g009500.2.1	Tomato	plastid	51.04	53.24
TraesCS5D01G136100.2	Wheat	golgi	47.15	52.45
Os01t0859200-01	Rice	plasma membrane	46.89	52.16
Zm00001d042780_P001	Maize	endoplasmic reticulum, vacuole	46.11	49.44
Solyc09g009520.2.1	Tomato	plastid	47.93	49.2
CDX71001	Canola	extracellular	27.46	48.85
Os12t0152500-00	Rice	cytosol	19.95	48.43
AT3G03240.1	Thale cress	extracellular	41.71	48.35
EES01786	Sorghum	endoplasmic reticulum, extracellular	45.6	48.22
CDY67187	Canola	extracellular, golgi	41.45	48.05
CDY68104	Canola	cytosol	20.21	47.85
Zm00001d044704_P018	Maize	plasma membrane	48.45	47.46
CDY43139	Canola	extracellular, golgi	40.93	47.45
CDY43140	Canola	extracellular	40.67	47.15
Solyc09g009550.2.1	Tomato	endoplasmic reticulum	42.49	47.13
Solyc06g074330.2.1	Tomato	cytosol	41.97	47.09
AT3G03230.1	Thale cress	extracellular	40.16	46.55
HORVU5Hr1G042290.8	Barley	golgi	47.15	46.43
CDY49935	Canola	extracellular	39.9	46.25
CDY21213	Canola	extracellular	39.9	46.25
CDY67186	Canola	extracellular	37.82	46.2
Solyc09g009540.2.1	Tomato	endoplasmic reticulum	42.49	45.94
Solyc01g009500.2.1	Tomato	cytosol	40.93	45.93
Solyc09g009510.2.1	Tomato	plastid	44.56	45.26
Solyc09g009530.2.1	Tomato	plastid	40.67	45.11
Solyc01g009480.2.1	Tomato	cytosol	37.56	44.89
Solyc11g007040.1.1	Tomato	plastid	46.37	44.2
Solyc05g055290.2.1	Tomato	extracellular, golgi	39.38	43.8
CDY21214	Canola	endoplasmic reticulum, golgi, plastid	39.9	43.75
CDY49934	Canola	endoplasmic reticulum, golgi	39.9	43.75
Bra021364.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	39.9	43.75
Solyc11g007030.1.1	Tomato	extracellular, mitochondrion	46.37	42.52
Solyc06g074340.2.1	Tomato	endoplasmic reticulum, golgi	32.38	35.41
CDY35686	Canola	endoplasmic reticulum, golgi	46.89	31.92
Bra032005.1-P	Field mustard	endoplasmic reticulum, extracellular	40.93	24.84
Solyc09g007380.2.1	Tomato	cytosol	26.42	19.39
Solyc11g072440.1.1	Tomato	cytosol, peroxisome, plastid	24.09	17.19

Protein Annotations

EnsemblPlants:Solyc11g067260.1.1	EnsemblPlantsGene:Solyc11g067260.1	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058
PANTHER:PTHR10992	PANTHER:PTHR10992:SF886	PFAM:PF12697	SEG:seg	SUPFAM:SSF53474	TMHMM:TMhelix
UniParc:UPI000276A474	UniProt:K4D9Y3	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr11:+:52996336..53001292

Molecular Weight (calculated)

43573.7 Da

IEP (calculated)

9.051

GRAVY (calculated)

-0.293

Length

386 amino acids

Sequence
(BLAST)

001: MNQSGKKITV ATARPHTRKS KNNICSSSGR TGGIQSSSSI CCSTKMIARI AVATTVGFLG WAYLALLKPP SPKVCGSPDG PPVTSRRVKL NDGRCVAYKE
101: GGVAKEKAKH KIIIIHGFDS SKDLMLPISQ DLIQELEIYV LQYDRAGYGE SDPHPKRSVK SEAFDVEELA DKLQLGPKFY VVGLSMGAYS AWSCLKYIPN
201: RLAGVALVVP FVNYWWPCYP AKLSKQALRK MLPQDQRTFR IAHYAPWLVH WWMNQKWFHA LSMLEGNMAI FCPPDLEMLK QLSSAPSPGQ EKVRQQGEFE
301: CLYRDLIVGF GNWDFFPTDI TNPFPDNEGS VHLWQGHDDR IIPRELNRYL AEKLPWIQYH EVPNAGHLLM HNASYCETIL RKLCTS

Best Arabidopsis Sequence Match ( AT5G22460.1 )
(BLAST)

001: MMFSVTVAIL VCLIGYIYRS FKPPPPRICG HPNGPPVTSP RIKLSDGRYL AYRESGVDRD NANYKIIVVH GFNSSKDTEF PIPKDVIEEL GIYFVFYDRA
101: GYGESDPHPS RTVKSEAYDI QELADKLKIG PKFYVLGISL GAYSVYSCLK YIPHRLAGAV LMVPFVNYWW TKVPQEKLSK ALELMPKKDQ WTFKVAHYVP
201: WLLYWWLTQK LFPSSSMVTG NNALCSDKDL VVIKKKMENP RPGLEKVRQQ GDHECLHRDM IAGFATWEFD PTELENPFAE GEGSVHVWQG MEDRIIPYEI
301: NRYISEKLPW IKYHEVLGYG HLLNAEEEKC KDIIKALLVN

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FMQ5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.