Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 4
- golgi 2
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g024090.1.1 | Tomato | cytosol | 30.23 | 21.14 |
| Solyc11g067260.1.1 | Tomato | plastid | 70.93 | 15.8 |
| VIT_06s0080g00320.t01 | Wine grape | extracellular, plasma membrane | 51.16 | 12.5 |
| Solyc05g055290.2.1 | Tomato | extracellular, golgi | 50.0 | 12.39 |
| Solyc01g009480.2.1 | Tomato | cytosol | 44.19 | 11.76 |
| Solyc09g009540.2.1 | Tomato | endoplasmic reticulum | 47.67 | 11.48 |
| Solyc09g009520.2.1 | Tomato | plastid | 50.0 | 11.44 |
| Solyc09g009500.2.1 | Tomato | plastid | 48.84 | 11.35 |
| Solyc01g009500.2.1 | Tomato | cytosol | 45.35 | 11.34 |
| Solyc09g009530.2.1 | Tomato | plastid | 45.35 | 11.21 |
| Solyc06g074330.2.1 | Tomato | cytosol | 44.19 | 11.05 |
| Solyc09g009550.2.1 | Tomato | endoplasmic reticulum | 44.19 | 10.92 |
| Solyc11g007040.1.1 | Tomato | plastid | 50.0 | 10.62 |
| Solyc09g009510.2.1 | Tomato | plastid | 46.51 | 10.53 |
| Solyc11g007030.1.1 | Tomato | extracellular, mitochondrion | 47.67 | 9.74 |
| Solyc06g074340.2.1 | Tomato | endoplasmic reticulum, golgi | 36.05 | 8.78 |
| Solyc09g007380.2.1 | Tomato | cytosol | 31.4 | 5.13 |
| Solyc11g072440.1.1 | Tomato | cytosol, peroxisome, plastid | 20.93 | 3.33 |
| GSMUA_Achr10P... | Banana | cytosol | 1.16 | 1.18 |
Protein Annotations
| EnsemblPlants:Solyc07g024080.1.1 | EnsemblPlantsGene:Solyc07g024080.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR10992 |
| PANTHER:PTHR10992:SF886 | TMHMM:TMhelix | UniParc:UPI000276ABEF | UniProt:K4CD58 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr7:+:24226081..24226495
Molecular Weight (calculated)
9684.7 Da
IEP (calculated)
4.920
GRAVY (calculated)
0.155
Length
86 amino acids
Sequence
(BLAST)
(BLAST)
1: MILLVMESDT HPKHSVKSEA FDVEELANKL QLGPMFYVIG LSMGAYSVLA GVAVIITFVN YWWSCYPSNQ SKEPVDKIVA QDQRTF
001: MMFSVTVAIL VCLIGYIYRS FKPPPPRICG HPNGPPVTSP RIKLSDGRYL AYRESGVDRD NANYKIIVVH GFNSSKDTEF PIPKDVIEEL GIYFVFYDRA
101: GYGESDPHPS RTVKSEAYDI QELADKLKIG PKFYVLGISL GAYSVYSCLK YIPHRLAGAV LMVPFVNYWW TKVPQEKLSK ALELMPKKDQ WTFKVAHYVP
201: WLLYWWLTQK LFPSSSMVTG NNALCSDKDL VVIKKKMENP RPGLEKVRQQ GDHECLHRDM IAGFATWEFD PTELENPFAE GEGSVHVWQG MEDRIIPYEI
301: NRYISEKLPW IKYHEVLGYG HLLNAEEEKC KDIIKALLVN
101: GYGESDPHPS RTVKSEAYDI QELADKLKIG PKFYVLGISL GAYSVYSCLK YIPHRLAGAV LMVPFVNYWW TKVPQEKLSK ALELMPKKDQ WTFKVAHYVP
201: WLLYWWLTQK LFPSSSMVTG NNALCSDKDL VVIKKKMENP RPGLEKVRQQ GDHECLHRDM IAGFATWEFD PTELENPFAE GEGSVHVWQG MEDRIIPYEI
301: NRYISEKLPW IKYHEVLGYG HLLNAEEEKC KDIIKALLVN
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FMQ5]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.