Factsheet for GSMUA_Achr10P04760_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68922	Canola	cytosol, mitochondrion	48.24	19.71
Bra019434.1-P	Field mustard	cytosol, mitochondrion	47.06	19.23
CDY68993	Canola	plasma membrane	38.82	17.65
VIT_06s0080g00320.t01	Wine grape	extracellular, plasma membrane	56.47	13.64
VIT_06s0080g00330.t01	Wine grape	vacuole	55.29	13.51
KRH33263	Soybean	extracellular, golgi	47.06	12.9
Solyc01g009500.2.1	Tomato	cytosol	50.59	12.5
KRH25210	Soybean	cytosol	51.76	12.39
KRH30441	Soybean	cytosol	35.29	12.2
CDY60542	Canola	cytosol	47.06	12.2
PGSC0003DMT400030589	Potato	extracellular	50.59	12.15
AT3G44510.2	Thale cress	cytosol	45.88	12.0
Solyc01g009480.2.1	Tomato	cytosol	44.71	11.76
PGSC0003DMT400030553	Potato	cytosol	44.71	11.76
GSMUA_Achr11P...	Banana	mitochondrion	50.59	11.59
PGSC0003DMT400018400	Potato	extracellular	45.88	11.02
Bra030720.1-P	Field mustard	nucleus	37.65	11.0
Solyc06g074330.2.1	Tomato	cytosol	43.53	10.76
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi, plasma membrane	44.71	10.61
CDX93573	Canola	cytosol	38.82	10.38
Bra018636.1-P	Field mustard	cytosol	38.82	10.31
Solyc06g074340.2.1	Tomato	endoplasmic reticulum, golgi	42.35	10.2
AT1G08310.2	Thale cress	cytosol	36.47	9.75
CDY31156	Canola	cytosol	36.47	9.42
CDX77120	Canola	extracellular	36.47	8.64
CDY32828	Canola	nucleus	40.0	8.15
CDX95073	Canola	golgi, vacuole	38.82	7.93
CDY30542	Canola	mitochondrion	34.12	7.53
GSMUA_Achr11P...	Banana	cytosol	12.94	4.85
Bra034356.1-P	Field mustard	mitochondrion	36.47	4.84
GSMUA_Achr9P04350_001	Banana	endoplasmic reticulum, extracellular, golgi	28.24	4.71
GSMUA_Achr6P33050_001	Banana	cytosol	24.71	4.17
GSMUA_Achr11P...	Banana	cytosol	9.41	3.96
CDX77121	Canola	mitochondrion	3.53	1.4
Solyc07g024080.1.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	1.18	1.16
KRH17703	Soybean	cytosol	0.0	0.0
Bra041127.1-P	Field mustard	cytosol	0.0	0.0
CDY72669	Canola	cytosol	0.0	0.0
CDY70769	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr10P04760_001	EnsemblPlants:GSMUA_Achr10T04760_001	EnsemblPlantsGene:GSMUA_Achr10G04760_001	InterPro:AB_hydrolase	InterPro:IPR029058	PANTHER:PTHR10992
PANTHER:PTHR10992:SF720	SUPFAM:SSF53474	UniParc:UPI00029549D8	UniProt:M0RFF3	MapMan:35.2	:

Description

Putative Na(+)-translocating NADH-quinone reductase subunit F [Source:GMGC_GENE;Acc:GSMUA_Achr10G04760_001]

Coordinates

chr10:-:14397533..14397790

Molecular Weight (calculated)

9884.5 Da

IEP (calculated)

5.439

GRAVY (calculated)

-0.571

Length

85 amino acids

Sequence
(BLAST)

1: MVAFSNWEFD PMNTSNPFPN NEGSVHKWQG YKDKLVQVEL QRYLAQKLAW IQYHESPEGG HFFMCVDHWG DAILKALLHS DDTST

Best Arabidopsis Sequence Match ( AT3G54240.1 )
(BLAST)

001: MKKWLITGAV VIVLIGLGAW AIVSITPPPP KRCGTPGGPP ITAPRIRLSD GRYLAYEEHG VSRQNATFKI VFIHAFSTFR RDAVIANRVR PGFLEKNGIY
101: VVSYDRPGYG ESDPHSSRNE KTLAHDVEQL ADQLQLGSKF YVVGYSMGGQ AVWGVLKYIP HRLAGATLLC PVTNSWWPSF PDSLTWELWN KQSKSERFSM
201: LITHHTPWLL YWWNNQKLFS TTAVMQSSPN MFSPQDLALL PKLAARVSYK NQTTQQGTHE SLDRDLIVGF GKWSFDPMKI ENPFPKGEGS VHMWQGDDDR
301: LVPIQLQRII AQKLTWIKYH EIPGAGHIFP MADGMAETIL KELLPIPQSS

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q4PSL3]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.