CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31156	Canola	cytosol	72.66	92.1
CDX93573	Canola	cytosol	63.31	83.02
AT1G08310.2	Thale cress	cytosol	61.15	80.19
CDY68993	Canola	plasma membrane	28.54	63.64
CDY72669	Canola	cytosol	18.23	60.8
CDY70769	Canola	cytosol	17.75	59.2
CDX95073	Canola	golgi, vacuole	58.99	59.13
CDY30542	Canola	mitochondrion	51.56	55.84
CDY60542	Canola	cytosol	43.41	55.18
CDY68922	Canola	cytosol, mitochondrion	26.86	53.85
Solyc06g074330.2.1	Tomato	cytosol	40.53	49.13
PGSC0003DMT400018400	Potato	extracellular	41.01	48.31
Solyc01g009500.2.1	Tomato	cytosol	39.81	48.26
PGSC0003DMT400030589	Potato	extracellular	39.81	46.89
PGSC0003DMT400030553	Potato	cytosol	35.49	45.82
Solyc01g009480.2.1	Tomato	cytosol	35.25	45.51
CDX77121	Canola	mitochondrion	23.02	44.86
GSMUA_Achr10P...	Banana	cytosol	8.15	40.0
CDY09141	Canola	endoplasmic reticulum, golgi	31.89	39.0
CDX88793	Canola	extracellular, golgi	31.41	38.3
CDY26931	Canola	endoplasmic reticulum, extracellular	30.7	37.65
CDX71001	Canola	extracellular	19.42	37.33
CDX92349	Canola	endoplasmic reticulum, golgi	29.98	36.76
Solyc06g074340.2.1	Tomato	endoplasmic reticulum, golgi	29.98	35.41
CDY49719	Canola	extracellular	29.02	35.28
CDX84140	Canola	plastid	29.98	34.44
CDX75055	Canola	plastid	29.98	34.44
CDY43140	Canola	extracellular	27.1	33.93
CDY49935	Canola	extracellular	27.1	33.93
CDY43139	Canola	extracellular, golgi	26.86	33.63
CDY67187	Canola	extracellular, golgi	26.86	33.63
CDX73073	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	29.02	33.61
CDY21213	Canola	extracellular	26.62	33.33
CDX76158	Canola	endoplasmic reticulum, golgi, vacuole	27.58	32.86
CDX77906	Canola	cytosol, golgi, peroxisome	29.26	32.62
CDY41508	Canola	cytosol, endoplasmic reticulum, golgi, mitochondrion	27.82	32.58
CDY65400	Canola	endoplasmic reticulum, golgi, vacuole	27.34	32.57
CDX96530	Canola	endoplasmic reticulum, golgi	28.3	32.51
CDY39579	Canola	cytosol, endoplasmic reticulum, peroxisome	29.02	32.44
CDY65628	Canola	cytosol, golgi, peroxisome	27.58	32.3
CDY21822	Canola	cytosol, golgi, peroxisome	29.5	32.28
CDY67186	Canola	extracellular	23.98	31.65
CDY49934	Canola	endoplasmic reticulum, golgi	26.62	31.53
CDY21214	Canola	endoplasmic reticulum, golgi, plastid	26.62	31.53
CDY68104	Canola	cytosol	11.27	28.83
CDY35686	Canola	endoplasmic reticulum, golgi	34.05	25.04
CDX77120	Canola	extracellular	18.94	22.01
CDX78221	Canola	endoplasmic reticulum, extracellular, plasma membrane	5.52	19.33
CDY10412	Canola	cytosol	23.26	18.41
CDX70335	Canola	cytosol	23.02	18.22
CDY71255	Canola	cytosol	13.43	17.83
CDY22195	Canola	cytosol, nucleus, plastid	21.34	17.18
CDY41305	Canola	cytosol, nucleus, plastid	21.1	16.92

Protein Annotations

EnsemblPlants:CDY32828	EnsemblPlantsGene:GSBRNA2T00052915001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4	InterPro:IPR029058
PANTHER:PTHR10992	PANTHER:PTHR10992:SF774	PFAM:PF12146	ProteinID:CDY32828	ProteinID:CDY32828.1	SEG:seg
SUPFAM:SSF53474	UniParc:UPI0004EEA942	UniProt:A0A078H7I8	MapMan:35.2	:	:

Description

BnaC08g02500DBnaC08g02500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H7I8]

Coordinates

chrLK032300:+:141705..144416

Molecular Weight (calculated)

48063.8 Da

IEP (calculated)

9.731

GRAVY (calculated)

-0.159

Length

417 amino acids

Sequence
(BLAST)

001: MGDSSENSKR VKLSDGRFLA YRESGVPKEE AKYKIILVHG FGSSKDMNFS ASKKPDLDFV SQELIQELGV YLLFYDRSGY GKSDSNAKRS LKSEVNDIVE
101: LADQLEIGPK FYLIGLSMGS YPTWGCLKHI PRRLSGVAFV APVVNYLWPS LPNELIKEDY MGGLIEWGLR ISKFAPRLLH WLVILIQKVL PSTSSVLESK
201: QVYFNSHDME VLKRTTGFPM FTKEKLRERD VFDTLRDDFV ACFGQWDFEP EDLSITQESN VHIWHGKEDK VVPFQLQRCV LQKQPLINYH EIPQGGHLIV
301: HYDGTCDAVL RALLLAGLIF HKRMEIFLDI AKRQKFKLLE ESTSWILYLN GTRSIKDEDG TSIKRKKKKK PLPLFFFYLL LRPSLLTKRM FSLKFLIDFV
401: VGLGLKVRLK VLWLKIG

Best Arabidopsis Sequence Match ( AT1G08310.2 )
(BLAST)

001: MGDSPASSNR VKLRDGRFLA YKERGVPKEK AKYKIILVHG FGSSKDMNFS ASKFFQELIE ELEVYLLFYD RSGYGASDSN TKRSLESEVE DIAELADQLE
101: LGPKFYLIGI SMGSYPTWGC LRHIPHRLSG VAFVAPVVNY RWPSLPKKLI KKDYRTGIIK WGLRISKYAP GLLHWWIIQK LFASTSSVLE SNPVYFNSHD
201: IEVLKRKTGF PMLTKEKLRE RNVFDTLRDD FMVCFGQWDF EPADLSISTK SYIHIWHGKE DKVVPFQLQR CILQKQPLIN YHEIPQGGHL IVHYDGICDT
301: ILRALLLKEE QQKLYKIN

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A8MRK8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.