CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006627.1-P	Field mustard	extracellular, golgi	100.0	100.0
CDY68104	Canola	cytosol	46.78	98.16
CDX71001	Canola	extracellular	50.88	80.18
CDY09141	Canola	endoplasmic reticulum, golgi	79.24	79.47
AT5G22460.1	Thale cress	endoplasmic reticulum	78.95	79.41
CDY26931	Canola	endoplasmic reticulum, extracellular	78.95	79.41
CDX92349	Canola	endoplasmic reticulum, golgi	78.36	78.82
CDY72669	Canola	cytosol	21.34	58.4
CDY70769	Canola	cytosol	21.05	57.6
KRH26627	Soybean	endoplasmic reticulum, extracellular, golgi	54.97	55.95
VIT_06s0080g00310.t01	Wine grape	extracellular	57.02	55.56
PGSC0003DMT400019164	Potato	extracellular, golgi	53.51	53.82
CDY43139	Canola	extracellular, golgi	51.46	52.85
CDY67187	Canola	extracellular, golgi	51.46	52.85
CDY43140	Canola	extracellular	50.29	51.65
CDY67186	Canola	extracellular	46.2	50.0
CDY49935	Canola	extracellular	48.25	49.55
CDY21213	Canola	extracellular	48.25	49.55
Os12t0152100-01	Rice	plasma membrane	49.42	49.27
EES15681	Sorghum	golgi, plasma membrane, vacuole	49.42	48.7
TraesCS5D01G136100.2	Wheat	golgi	49.12	48.41
TraesCS5A01G128500.2	Wheat	golgi	49.12	48.41
CDY49719	Canola	extracellular	47.66	47.52
Solyc11g067260.1.1	Tomato	plastid	53.51	47.41
CDY35686	Canola	endoplasmic reticulum, golgi	78.07	47.09
Os01t0859200-01	Rice	plasma membrane	46.78	46.11
CDY21214	Canola	endoplasmic reticulum, golgi, plastid	47.37	46.02
CDY49934	Canola	endoplasmic reticulum, golgi	47.37	46.02
CDX75055	Canola	plastid	48.25	45.45
CDX96530	Canola	endoplasmic reticulum, golgi	47.95	45.18
CDX73073	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	47.37	45.0
CDX84140	Canola	plastid	47.66	44.9
Zm00001d042780_P001	Maize	endoplasmic reticulum, vacuole	46.49	44.17
EES01786	Sorghum	endoplasmic reticulum, extracellular	46.78	43.84
CDY39579	Canola	cytosol, endoplasmic reticulum, peroxisome	47.66	43.7
HORVU5Hr1G042290.8	Barley	golgi	49.71	43.37
Zm00001d044704_P018	Maize	plasma membrane	49.12	42.64
CDX76158	Canola	endoplasmic reticulum, golgi, vacuole	43.57	42.57
CDY41508	Canola	cytosol, endoplasmic reticulum, golgi, mitochondrion	44.15	42.42
CDY60542	Canola	cytosol	40.64	42.38
CDY65400	Canola	endoplasmic reticulum, golgi, vacuole	43.27	42.29
CDX77906	Canola	cytosol, golgi, peroxisome	46.2	42.25
CDY65628	Canola	cytosol, golgi, peroxisome	43.86	42.13
CDY21822	Canola	cytosol, golgi, peroxisome	46.49	41.73
Os12t0152500-00	Rice	cytosol	19.01	40.88
CDX77121	Canola	mitochondrion	25.44	40.65
CDY31156	Canola	cytosol	38.89	40.43
CDX93573	Canola	cytosol	36.26	38.99
CDY30542	Canola	mitochondrion	42.98	38.18
CDY68922	Canola	cytosol, mitochondrion	20.76	34.13
CDX78221	Canola	endoplasmic reticulum, extracellular, plasma membrane	11.11	31.93
CDY32828	Canola	nucleus	38.3	31.41
CDX95073	Canola	golgi, vacuole	34.8	28.61
CDY68993	Canola	plasma membrane	12.87	23.53
CDY71255	Canola	cytosol	16.96	18.47
CDY10412	Canola	cytosol	27.19	17.65
CDY41305	Canola	cytosol, nucleus, plastid	26.61	17.5
CDX70335	Canola	cytosol	26.9	17.46
CDY22195	Canola	cytosol, nucleus, plastid	26.32	17.37
CDX77120	Canola	extracellular	12.28	11.7

Protein Annotations

EnsemblPlants:CDX88793	EnsemblPlantsGene:GSBRNA2T00148855001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058
PANTHER:PTHR10992	PANTHER:PTHR10992:SF886	PFAM:PF12697	ProteinID:CDX88793	ProteinID:CDX88793.1	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF53474	TMHMM:TMhelix	UniParc:UPI000254013F	MapMan:35.2	:

Description

BnaA03g08560D

Coordinates

chrLK031856:+:963182..965085

Molecular Weight (calculated)

39193.6 Da

IEP (calculated)

8.523

GRAVY (calculated)

-0.210

Length

342 amino acids

Sequence
(BLAST)

001: MMLLIIVAIL VCLVCYIYRT LKPPPSRICG TPRGPPVTAR RVKLSDGRHL AYRESGVDRD NAKYKIIVVH GFGSSKHMDF PISKGLVEEL GLYFVFFDRA
101: GYGQSDPHPS RTIKSEAYDI QELADKLNLG PKFYVIGVSL GAYSVYSCLK YIPHRLAGAV LVVPFVSYWW TKVPQNMLSE ALKLLPETDQ WTFRVAHYVP
201: WLLYWWLTQK LFTSSSVISG GKALRSNKDL VIIKKKQENP NPLMKKARQQ GDHECLHRDM IAGFTTWEFD PTELENPFEE GVGSVHMWQG MEDKMIPREI
301: NQYISKRLPW IKYHEVPGYG HLLNAEEEKC EDIIKALLVS DD

Best Arabidopsis Sequence Match ( AT5G22460.1 )
(BLAST)

001: MMFSVTVAIL VCLIGYIYRS FKPPPPRICG HPNGPPVTSP RIKLSDGRYL AYRESGVDRD NANYKIIVVH GFNSSKDTEF PIPKDVIEEL GIYFVFYDRA
101: GYGESDPHPS RTVKSEAYDI QELADKLKIG PKFYVLGISL GAYSVYSCLK YIPHRLAGAV LMVPFVNYWW TKVPQEKLSK ALELMPKKDQ WTFKVAHYVP
201: WLLYWWLTQK LFPSSSMVTG NNALCSDKDL VVIKKKMENP RPGLEKVRQQ GDHECLHRDM IAGFATWEFD PTELENPFAE GEGSVHVWQG MEDRIIPYEI
301: NRYISEKLPW IKYHEVLGYG HLLNAEEEKC KDIIKALLVN

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FMQ5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.