Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G136100.2 | Wheat | golgi | 85.71 | 96.83 |
| TraesCS5A01G128500.2 | Wheat | golgi | 85.46 | 96.54 |
| EES15681 | Sorghum | golgi, plasma membrane, vacuole | 76.28 | 86.17 |
| Os12t0152100-01 | Rice | plasma membrane | 74.49 | 85.13 |
| Zm00001d044704_P018 | Maize | plasma membrane | 76.79 | 76.4 |
| Os12t0152500-00 | Rice | cytosol | 24.49 | 60.38 |
| KRH26627 | Soybean | endoplasmic reticulum, extracellular, golgi | 47.7 | 55.65 |
| VIT_06s0080g00310.t01 | Wine grape | extracellular | 48.72 | 54.42 |
| PGSC0003DMT400019164 | Potato | extracellular, golgi | 46.43 | 53.53 |
| CDX92349 | Canola | endoplasmic reticulum, golgi | 45.66 | 52.65 |
| AT5G22460.1 | Thale cress | endoplasmic reticulum | 45.66 | 52.65 |
| Bra002413.1-P | Field mustard | endoplasmic reticulum, golgi | 45.41 | 52.35 |
| CDY26931 | Canola | endoplasmic reticulum, extracellular | 44.9 | 51.76 |
| CDY09141 | Canola | endoplasmic reticulum, golgi | 43.88 | 50.44 |
| Bra006627.1-P | Field mustard | extracellular, golgi | 43.37 | 49.71 |
| CDX88793 | Canola | extracellular, golgi | 43.37 | 49.71 |
| Bra020194.1-P | Field mustard | cytosol | 33.42 | 49.62 |
| AT3G03240.1 | Thale cress | extracellular | 41.07 | 48.35 |
| Solyc11g067260.1.1 | Tomato | plastid | 46.43 | 47.15 |
| CDY67187 | Canola | extracellular, golgi | 40.05 | 47.15 |
| CDX71001 | Canola | extracellular | 26.02 | 47.0 |
| CDY43139 | Canola | extracellular, golgi | 39.8 | 46.85 |
| CDY43140 | Canola | extracellular | 39.03 | 45.95 |
| HORVU6Hr1G033060.1 | Barley | plastid | 42.6 | 45.26 |
| CDY49935 | Canola | extracellular | 38.27 | 45.05 |
| AT3G03230.1 | Thale cress | extracellular | 38.27 | 45.05 |
| CDY67186 | Canola | extracellular | 36.22 | 44.94 |
| CDY21213 | Canola | extracellular | 38.01 | 44.74 |
| HORVU2Hr1G072830.4 | Barley | endoplasmic reticulum, golgi | 42.09 | 44.35 |
| HORVU1Hr1G048530.2 | Barley | plastid | 40.05 | 43.98 |
| HORVU4Hr1G086270.1 | Barley | cytosol | 40.31 | 43.65 |
| CDY21214 | Canola | endoplasmic reticulum, golgi, plastid | 38.78 | 43.18 |
| Bra021364.1-P | Field mustard | endoplasmic reticulum, golgi, plastid | 38.78 | 43.18 |
| CDY49934 | Canola | endoplasmic reticulum, golgi | 38.78 | 43.18 |
| CDY68104 | Canola | cytosol | 17.86 | 42.94 |
| HORVU1Hr1G074380.4 | Barley | golgi | 39.03 | 41.69 |
| HORVU1Hr1G048550.1 | Barley | endoplasmic reticulum, plasma membrane | 37.24 | 39.35 |
| CDY35686 | Canola | endoplasmic reticulum, golgi | 43.88 | 30.34 |
| Bra032005.1-P | Field mustard | endoplasmic reticulum, extracellular | 39.8 | 24.53 |
| HORVU4Hr1G056700.4 | Barley | plastid | 27.04 | 16.59 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G042290.8 | EnsemblPlantsGene:HORVU5Hr1G042290 | Gene3D:3.40.50.1820 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:AB_hydrolase | InterPro:Hydrolase_4 | InterPro:IPR029058 | PANTHER:PTHR10992 | PANTHER:PTHR10992:SF720 | PFAM:PF12146 |
| SEG:seg | SUPFAM:SSF53474 | TMHMM:TMhelix | UniParc:UPI000B46AEC8 | UniProt:A0A287QZ21 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr5H:-:322851823..322853903
Molecular Weight (calculated)
44617.4 Da
IEP (calculated)
8.418
GRAVY (calculated)
-0.228
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: AMGPVRAMMR THYRWSGVKE QPTLQLCPVT HKPPQLTPKA LDLGRMAPRL LVVLPVVLLG LAFQAILQPP PTKRCGSAGG PPVTSPRIKL RDGRYLAYRE
101: DGVQKDKAKY KVITVHAFDS TKDFPSPVSK ELVEELEIYL LAFDRAGYGE SDPNPGRSVK SEALDIEELA DQLELGQKFH VLGVSMGGYT VWGCLQYIPH
201: RLAGATLVVP VINYWWPSFP PEVSRQAFKK LIVPEQRTLW IAHNVPYLLY LWMTQKWLPS SAAAMHHPEI FSKHDMEVIQ KMMAMPRTIE NKSRQQGIYE
301: SIHRDLLVAF GNWEFDPMNI SNPFPTNEGS VHIWQGYEDR LVLVELQRYL SKKLPWIQYH EVQEGGHMFM LVDGWTDKII KALLVGEEAS PM
101: DGVQKDKAKY KVITVHAFDS TKDFPSPVSK ELVEELEIYL LAFDRAGYGE SDPNPGRSVK SEALDIEELA DQLELGQKFH VLGVSMGGYT VWGCLQYIPH
201: RLAGATLVVP VINYWWPSFP PEVSRQAFKK LIVPEQRTLW IAHNVPYLLY LWMTQKWLPS SAAAMHHPEI FSKHDMEVIQ KMMAMPRTIE NKSRQQGIYE
301: SIHRDLLVAF GNWEFDPMNI SNPFPTNEGS VHIWQGYEDR LVLVELQRYL SKKLPWIQYH EVQEGGHMFM LVDGWTDKII KALLVGEEAS PM
001: MMFSVTVAIL VCLIGYIYRS FKPPPPRICG HPNGPPVTSP RIKLSDGRYL AYRESGVDRD NANYKIIVVH GFNSSKDTEF PIPKDVIEEL GIYFVFYDRA
101: GYGESDPHPS RTVKSEAYDI QELADKLKIG PKFYVLGISL GAYSVYSCLK YIPHRLAGAV LMVPFVNYWW TKVPQEKLSK ALELMPKKDQ WTFKVAHYVP
201: WLLYWWLTQK LFPSSSMVTG NNALCSDKDL VVIKKKMENP RPGLEKVRQQ GDHECLHRDM IAGFATWEFD PTELENPFAE GEGSVHVWQG MEDRIIPYEI
301: NRYISEKLPW IKYHEVLGYG HLLNAEEEKC KDIIKALLVN
101: GYGESDPHPS RTVKSEAYDI QELADKLKIG PKFYVLGISL GAYSVYSCLK YIPHRLAGAV LMVPFVNYWW TKVPQEKLSK ALELMPKKDQ WTFKVAHYVP
201: WLLYWWLTQK LFPSSSMVTG NNALCSDKDL VVIKKKMENP RPGLEKVRQQ GDHECLHRDM IAGFATWEFD PTELENPFAE GEGSVHVWQG MEDRIIPYEI
301: NRYISEKLPW IKYHEVLGYG HLLNAEEEKC KDIIKALLVN
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FMQ5]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.