Factsheet for HORVU4Hr1G056700.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, peroxisome, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	mitochondrion
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G081700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G09690.1	HORVU1Hr1G081700.1	AT2G20130.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G196600.1	Wheat	cytosol, nucleus, plasma membrane	80.91	97.18
TraesCS4D01G196900.1	Wheat	cytosol, peroxisome, plasma membrane	80.75	96.63
TraesCS4A01G108000.1	Wheat	cytosol, peroxisome, plasma membrane	80.44	96.07
Os03t0288300-01	Rice	cytosol, endoplasmic reticulum, peroxisome	70.11	83.58
EER95045	Sorghum	cytosol	68.7	82.52
Zm00001d047749_P001	Maize	cytosol	66.67	80.99
Zm00001d028727_P001	Maize	plasma membrane	66.2	79.36
Os12t0535400-01	Rice	cytosol, plasma membrane	17.68	70.19
GSMUA_Achr6P33050_001	Banana	cytosol	51.33	65.21
GSMUA_Achr9P04350_001	Banana	endoplasmic reticulum, extracellular, golgi	48.98	61.37
VIT_06s0004g03310.t01	Wine grape	cytosol	44.13	57.43
VIT_08s0040g02380.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	45.07	56.92
KRG89038	Soybean	cytosol, golgi, plastid	42.41	55.88
Bra009556.1-P	Field mustard	cytosol	43.66	52.94
CDY71255	Canola	cytosol	25.98	52.87
KRH24928	Soybean	golgi, peroxisome, plasma membrane	42.41	52.72
AT5G02970.1	Thale cress	cytosol	42.41	52.72
CDY22195	Canola	cytosol, nucleus, plastid	42.72	52.7
CDX70335	Canola	cytosol	43.35	52.56
Solyc11g072440.1.1	Tomato	cytosol, peroxisome, plastid	44.44	52.5
PGSC0003DMT400070409	Potato	cytosol, peroxisome, plastid	44.6	52.49
CDY10412	Canola	cytosol	43.19	52.37
Bra034078.1-P	Field mustard	cytosol, nucleus, plastid	42.57	52.31
CDY41305	Canola	cytosol, nucleus, plastid	42.57	52.31
KRH32415	Soybean	endoplasmic reticulum	41.78	52.05
KRH19822	Soybean	cytosol	41.47	51.96
Solyc09g007380.2.1	Tomato	cytosol	42.72	51.9
PGSC0003DMT400004379	Potato	cytosol	42.57	51.42
AT3G09690.1	Thale cress	cytosol	42.25	51.23
HORVU1Hr1G048530.2	Barley	plastid	17.53	31.37
HORVU4Hr1G086270.1	Barley	cytosol	16.9	29.83
HORVU1Hr1G048550.1	Barley	endoplasmic reticulum, plasma membrane	17.06	29.38
HORVU2Hr1G072830.4	Barley	endoplasmic reticulum, golgi	16.28	27.96
HORVU6Hr1G033060.1	Barley	plastid	16.12	27.91
HORVU1Hr1G074380.4	Barley	golgi	15.96	27.79
HORVU5Hr1G042290.8	Barley	golgi	16.59	27.04

Protein Annotations

EnsemblPlants:HORVU4Hr1G056700.4	EnsemblPlantsGene:HORVU4Hr1G056700	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058	ncoils:Coil
PANTHER:PTHR10992	PANTHER:PTHR10992:SF994	PFAM:PF12697	SEG:seg	SUPFAM:SSF53474	UniParc:UPI000B47FD72
UniProt:A0A287P7B9	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:476286598..476291722

Molecular Weight (calculated)

70231.2 Da

IEP (calculated)

6.112

GRAVY (calculated)

-0.340

Length

639 amino acids

Sequence
(BLAST)

001: AIPRQSNRSL TPSAVGSSHP TAQIRVRPRR TKATPEQPTG QTTQVGPNPP ALPLQFPVSP PFQFQPRLLS IHSPLLAALR RGEFLPLSRA HQTHARAEAI
101: GGAMAAATTM TWHEELATLV GDTGVRLPAA AAPAPNSGAA AVGGGWYGEE EEGKVEEGWA QQARGFAEST AEMLRELGLG VWDVAAQSLA GAEDSELARR
201: LRRPAAAAGK RLSFMNEYLP EDRDPVRCWA VVAAVAFVAL LVLGVGSGDD TPVEQPKKLY ISPPNAKRFQ LPDGRHLAYE EKGISAGRAR FSLVAPHSFL
301: SSRLAGIPGI SSSLLEEFGA RLVTYDLPGF GESDPHPGRN LNSSALDMLH LADALGIVDK FWVVGYSGGG MHAWSALRYI PDRVAGAAMF APMVNPYDSK
401: MTKDEKRKIW DRWSTKRKLM HILARRFPSL LRLFYHRSFL SGKQGQPESW LSLSTGKRDK TLLEAPMFNA FWEKDVAESV RQGDAQPFVE EAVLQVSDWG
501: FSLSDIQMQK KEDQGVFEFI KSLFSQAERE WVGFLGPIHI WQGMDDRVVP PSATEFARRM VPGATVHKLL DEGHFSYFCF CDECHRQIFS TLFGTPQGPL
601: NPVPEPSEVA REPTEETSPA YEEEEEEVAE QEQETSGLA

Best Arabidopsis Sequence Match ( AT5G02970.1 )
(BLAST)

001: MEEIRGVPTW QEELASLVDA GLRYDGAPID LTAATKRSGF VSADGSGSEP KETLKDQVTG FMKSWGEMLL ELAKGCKDIV QQTVVTDDSF LVRKLRKPAA
101: KVSKKLSFLN EFLPEDRDPI HAWPVIFFVF LLALAALSFS PENDRPVTVI TKLRLHPTGA TRVQLPDGRY IAYQELGVSA ERARYSLVMP HSFLSSRLAG
201: IPGVKKSLLV EYGVRLVSYD LPGFGESDPH RGRNLSSSAS DMINLAAAIG IDEKFWLLGY STGSIHTWAG MKYFPEKIAG AAMVAPVINP YEPSMVKEEV
301: VKTWEQWLTK RKFMYFLARR FPILLPFFYR RSFLSGNLDQ LDQWMALSLG EKDKLLIKDP TFQEVYQRNV EESVRQGITK PFVEEAVLQV SNWGFTLSEF
401: RTQKKCATNG VLSWLMSMYS EAECELIGFR KPIHIWQGME DRVAPPSMSD YISRMIPEAT VHKIRNEGHF SFFYFCDECH RQIFYALFGE PKGQLERVKE
501: TEDTVVETEA HKDT

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYY8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.