Factsheet for VIT_06s0004g03310.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89038	Soybean	cytosol, golgi, plastid	66.8	67.63
VIT_08s0040g02380.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	64.56	62.65
KRH24928	Soybean	golgi, peroxisome, plasma membrane	65.58	62.65
GSMUA_Achr6P33050_001	Banana	cytosol	61.3	59.84
GSMUA_Achr9P04350_001	Banana	endoplasmic reticulum, extracellular, golgi	59.47	57.25
PGSC0003DMT400070409	Potato	cytosol, peroxisome, plastid	60.9	55.06
Solyc11g072440.1.1	Tomato	cytosol, peroxisome, plastid	60.49	54.9
EER95045	Sorghum	cytosol	57.43	53.01
Zm00001d047749_P001	Maize	cytosol	56.62	52.85
TraesCS4B01G196600.1	Wheat	cytosol, nucleus, plasma membrane	57.03	52.63
TraesCS4D01G196900.1	Wheat	cytosol, peroxisome, plasma membrane	57.03	52.43
Zm00001d028727_P001	Maize	plasma membrane	56.82	52.35
TraesCS4A01G108000.1	Wheat	cytosol, peroxisome, plasma membrane	57.03	52.34
Os03t0288300-01	Rice	cytosol, endoplasmic reticulum, peroxisome	56.62	51.87
HORVU4Hr1G056700.4	Barley	plastid	57.43	44.13
Os12t0535400-01	Rice	cytosol, plasma membrane	14.05	42.86
VIT_06s0080g00320.t01	Wine grape	extracellular, plasma membrane	22.81	31.82
VIT_15s0048g02050.t01	Wine grape	cytosol	20.57	30.79
VIT_15s0048g02060.t01	Wine grape	plastid	18.53	29.74
VIT_08s0007g03440.t01	Wine grape	plastid	22.2	28.91
VIT_06s0080g00330.t01	Wine grape	vacuole	19.76	27.87
VIT_13s0106g00780.t01	Wine grape	mitochondrion	21.18	27.81
VIT_06s0080g00310.t01	Wine grape	extracellular	19.35	27.07
VIT_03s0017g02230.t01	Wine grape	cytosol	5.91	18.35

Protein Annotations

ArrayExpress:VIT_06s0004g03310	EMBL:FN594951	EnsemblPlants:VIT_06s0004g03310.t01	EnsemblPlantsGene:VIT_06s0004g03310	EntrezGene:100263767	GO:GO:0003674
GO:GO:0003824	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058	PANTHER:PTHR10992
PANTHER:PTHR10992:SF994	PFAM:PF00561	ProteinID:CCB43646	ProteinID:CCB43646.1	RefSeq:XP_010651122.1	SUPFAM:SSF53474
TIGR:TC69678	unigene:Vvi.2486	UniParc:UPI000210A5FA	UniProt:F6GTY2	MapMan:35.2	:

Description

No Description!

Coordinates

chr6:-:4132846..4141990

Molecular Weight (calculated)

56126.3 Da

IEP (calculated)

6.573

GRAVY (calculated)

-0.294

Length

491 amino acids

Sequence
(BLAST)

001: MEYENGVREL EAESFKDQVK EFLKASAEMG VELVKGCRDI VKQSLGNENS YVVRKFGGHW NRLSRRLSFL NEFLPEDRDP THAWSVVLFV SVLAFTALNN
101: TEYATPTPLL KEVYIHPPNA SRILLPDGRY LAYQEQGVLA ERARYSMMAP HSFLSSRLSG IPGVKAPLLE EFGIRLVTYD LPGFGESDPH PNRNLESSAL
201: DMLYLANALG VNGKFWVVGH SGGSMHAWAA LRYIPDRLAG AAMFAPVVNP YDPSMTKQER YGMWEKWTFR RKLMYFLARR FPRFLSYLYR KSFLSGKHGQ
301: IDKWLSLSLG KRDKALIAEP IFVEFWQRDV EESIRQGDAK PFVEEAVMQV SDWGFSLGEL KMQKKHRGSG ILHWLKSKYS QEEEELMGFL GPIHIWQGMD
401: DRVVPPSMTD FVHRILPGAT IHKLPYEGHF TYFYFCDKCH RQIFNTLFET PQGPLVSIEE VDQTPIEGGV EDAEEVTLGD SATKSDLIFI V

Best Arabidopsis Sequence Match ( AT3G09690.1 )
(BLAST)

001: MEEMRRGVPT WQDELASLMD GGLQYDGSPI DLTADTESRS KSSGFESGSG SESVESLKDQ VTGFMKSWGE MLMDLAIGCK DVVQQMVVTD DSFVVRKLRK
101: PAAKVSKKLS FLNEYLPEDR DPVHAWPVIF FVFLLALTAL SFSSDHDRSV PLLKKIRLHP TSASRVQLPD GRYLAYQELG VSADRARHSL IVPHSFLSSR
201: LAGIPGVKES LLKDYGVRLV SYDLPGFGES DPHRARNLSS SASDMIDLAA ALGIVDKFWL LGYSSGSVHA WAAMRYFPDQ IAGVAMVAPM INPYEPSMTK
301: EEMAKTWEQW QRKRKFMYFL ARRWPSLLPF SYRRSFLSGN LEPLDKWMSV SLGEKDKLVT ADPVFEDLYQ RNVEESVRQG TAKPFVEEAA LQVSNWGFSL
401: PEFHMQKKCR TNGVLSWLMS MYSESECELI GFRKPIHIWQ GMDDRVTPPS VTDYISRVIP EATVHRLPNE GHFSYFYLCD ECHTQIFSAI FGEPKGPVEL
501: LEQRTETHRP DQPKTGLSDS SSLPKSK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF34]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.