Factsheet for VIT_06s0080g00330.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra041127.1-P	Field mustard	cytosol	23.56	65.6
CDY72669	Canola	cytosol	23.28	64.8
CDY70769	Canola	cytosol	22.99	64.0
KRH17703	Soybean	cytosol	21.84	63.33
KRH25210	Soybean	cytosol	62.93	61.69
AT3G44510.2	Thale cress	cytosol	56.03	60.0
CDY60542	Canola	cytosol	56.03	59.45
VIT_06s0080g00320.t01	Wine grape	extracellular, plasma membrane	59.77	59.09
KRH30441	Soybean	cytosol	40.52	57.32
CDY68922	Canola	cytosol, mitochondrion	33.91	56.73
VIT_06s0080g00310.t01	Wine grape	extracellular	56.9	56.41
Bra019434.1-P	Field mustard	cytosol, mitochondrion	33.62	56.25
GSMUA_Achr10P...	Banana	cytosol	13.51	55.29
KRH33263	Soybean	extracellular, golgi	43.39	48.71
VIT_08s0007g03440.t01	Wine grape	plastid	51.44	47.48
VIT_13s0106g00780.t01	Wine grape	mitochondrion	47.99	44.65
VIT_15s0048g02060.t01	Wine grape	plastid	38.79	44.12
VIT_15s0048g02050.t01	Wine grape	cytosol	40.8	43.29
VIT_03s0017g02230.t01	Wine grape	cytosol	19.54	43.04
VIT_06s0004g03310.t01	Wine grape	cytosol	27.87	19.76
VIT_08s0040g02380.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	25.86	17.79

Protein Annotations

EntrezGene:100253478	wikigene:100253478	Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
ProteinID:CCB51661	ProteinID:CCB51661.1	UniProt:F6HHG5	EMBL:FN595757	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	InterPro:IPR029058	EntrezGene:LOC100253478	wikigene:LOC100253478	PFAM:PF12697	PANTHER:PTHR10992
PANTHER:PTHR10992:SF774	SUPFAM:SSF53474	SignalP:SignalP-noTM	UniParc:UPI000210820E	ArrayExpress:VIT_06s0080g00330	EnsemblPlantsGene:VIT_06s0080g00330
EnsemblPlants:VIT_06s0080g00330.t01	RefSeq:XP_002276360	RefSeq:XP_002276360.1	RefSeq:XP_002276360.2	SEG:seg	:

Description

No Description!

Coordinates

chr6:+:20241410..20244858

Molecular Weight (calculated)

40043.2 Da

IEP (calculated)

6.440

GRAVY (calculated)

-0.172

Length

348 amino acids

Sequence
(BLAST)

001: MNSIWMVLKT ALVLLMGLLG LAYRATQPAH PESTELSDVP PTSSPRIMLS DGRYLAYKEK GVPKNESNYK IIIVHGFGSS KEMNFLAPQE LIDELGIYFL
101: LFDRAGYGES DLNPKRSVKN EAFDIQEVAD RLELGSKFYV IGVSMGSYPT WSCLKHIPHR LAGVALVVPV INYSWPSLPH YLTREDYRKK LFPWVLWIAN
201: HAPDLLYWWV TQIWFPSSSS MERSPMFFSN RDIDILKKTS GFPMLSQDKI RQRGVFESLR HDFIVGFGDW DFDPMDLSNP FPQNESSVHI WQGYEDKVVP
301: FQLQRYVAEK LPWIRYHEVP DGGHLIVHYQ GLCEAILRAL LIGEETPL

Best Arabidopsis Sequence Match ( AT3G44510.2 )
(BLAST)

001: MEEHLQGRIK LHDGRYLAYK ERGVPKDDAK FTIVLVHGFG SSKDMNFNVS QELVNEIGIY FVLYDRAGYG ESDPNPKRSL KSEAYDVQEL ADGLEIGSRF
101: YLIGISMGSY TVWSCLKHIP QRLAGVAMVA PVVNFRWPSI PKSLMPKDYR REVAKWSVWI ANYFPGLLQW LVTQNMFSTT SMLEKNPVYF NDQDIEVLKH
201: IKGFPMLTKE KLRERGVFGT LRSDFLVAFG DWDFDPADLP DPSLSGPEKG SSSVHIWQGY EDKVMPFQLQ RCLCRKLPWI RYHEVPKGGH LIVHYDGICD
301: AILKSLLLGE DLPMYKPKAV ITEPA

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J341]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.