Factsheet for VIT_06s0080g00310.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26627	Soybean	endoplasmic reticulum, extracellular, golgi	65.81	68.75
PGSC0003DMT400019164	Potato	extracellular, golgi	64.67	66.76
CDY09141	Canola	endoplasmic reticulum, golgi	57.83	59.53
AT5G22460.1	Thale cress	endoplasmic reticulum	56.98	58.82
Solyc11g067260.1.1	Tomato	plastid	64.67	58.81
Bra020194.1-P	Field mustard	cytosol	44.16	58.71
VIT_06s0080g00320.t01	Wine grape	extracellular, plasma membrane	58.69	58.52
Bra002413.1-P	Field mustard	endoplasmic reticulum, golgi	56.13	57.94
Os12t0152100-01	Rice	plasma membrane	56.41	57.73
CDX92349	Canola	endoplasmic reticulum, golgi	55.84	57.65
CDY26931	Canola	endoplasmic reticulum, extracellular	55.56	57.35
Bra006627.1-P	Field mustard	extracellular, golgi	55.56	57.02
CDX88793	Canola	extracellular, golgi	55.56	57.02
VIT_06s0080g00330.t01	Wine grape	vacuole	56.41	56.9
EES15681	Sorghum	golgi, plasma membrane, vacuole	55.84	56.48
TraesCS5D01G136100.2	Wheat	golgi	54.42	55.04
TraesCS5A01G128500.2	Wheat	golgi	54.13	54.76
Os01t0859200-01	Rice	plasma membrane	51.57	52.16
CDX71001	Canola	extracellular	31.91	51.61
CDY43139	Canola	extracellular, golgi	47.86	50.45
CDY67187	Canola	extracellular, golgi	47.86	50.45
VIT_08s0007g03440.t01	Wine grape	plastid	54.13	50.4
CDY68104	Canola	cytosol	23.36	50.31
Zm00001d042780_P001	Maize	endoplasmic reticulum, vacuole	51.57	50.28
AT3G03240.1	Thale cress	extracellular	47.01	49.55
CDY43140	Canola	extracellular	47.01	49.55
EES01786	Sorghum	endoplasmic reticulum, extracellular	51.28	49.32
CDY21213	Canola	extracellular	46.72	49.25
CDY49935	Canola	extracellular	46.44	48.95
AT3G03230.1	Thale cress	extracellular	46.44	48.95
CDY67186	Canola	extracellular	43.87	48.73
HORVU5Hr1G042290.8	Barley	golgi	54.42	48.72
VIT_13s0106g00780.t01	Wine grape	mitochondrion	51.57	48.4
VIT_15s0048g02060.t01	Wine grape	plastid	42.17	48.37
Zm00001d044704_P018	Maize	plasma membrane	53.85	47.97
VIT_15s0048g02050.t01	Wine grape	cytosol	44.73	47.87
Os12t0152500-00	Rice	cytosol	21.08	46.54
CDY49934	Canola	endoplasmic reticulum, golgi	46.15	46.02
Bra021364.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	45.87	45.74
CDY21214	Canola	endoplasmic reticulum, golgi, plastid	45.87	45.74
VIT_03s0017g02230.t01	Wine grape	cytosol	20.51	45.57
CDY35686	Canola	endoplasmic reticulum, golgi	56.41	34.92
Bra032005.1-P	Field mustard	endoplasmic reticulum, extracellular	47.86	26.42
VIT_08s0040g02380.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	27.92	19.37
VIT_06s0004g03310.t01	Wine grape	cytosol	27.07	19.35

Protein Annotations

EntrezGene:100245043	wikigene:100245043	Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
ProteinID:CCB51662	ProteinID:CCB51662.1	UniProt:F6HHG6	EMBL:FN595757	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008270	GO:GO:0016787	InterPro:IPR029058	EntrezGene:LOC100245043	wikigene:LOC100245043
PFAM:PF12697	PANTHER:PTHR10992	PANTHER:PTHR10992:SF886	SUPFAM:SSF53474	SignalP:SignalP-noTM	UniParc:UPI000210820F
ArrayExpress:VIT_06s0080g00310	EnsemblPlantsGene:VIT_06s0080g00310	EnsemblPlants:VIT_06s0080g00310.t01	RefSeq:XP_002274491	RefSeq:XP_002274491.2	SEG:seg

Description

No Description!

Coordinates

chr6:+:20230212..20236820

Molecular Weight (calculated)

40134.5 Da

IEP (calculated)

7.046

GRAVY (calculated)

-0.162

Length

351 amino acids

Sequence
(BLAST)

001: MFVPIAVAVV VGVLGWAYQA TKPPPPKICG SPDGPLVTSP RVRLSDGRHL AYRETGVSKE EAKYKIIVIH GFDSSKDLNL PASHRCVWYI GIGMEELIEE
101: LGIYFLFFDR AGYGDSDPNP KRSVKSEAFD IQELADKLQI GSKFYVLGVS MGAYPIWGCL KYIPNRLSGA ALVVPFVHYW WPCFPSQLAK EAFKTLCVQD
201: QWVFRVAYHA PWLFYWWMTQ KWFPSLSIMA GNMSIFSQPD LEMLKKLSEI PSAGQEKIRQ QGVHESLHRD IMAGYSKWEF DPLDINNPFP DNEGSVHIWQ
301: GYQDKIIPYK LNRYISEKLP WIRYHEVPEG GHLLIFDQKT CEDILRGLLP G

Best Arabidopsis Sequence Match ( AT5G22460.1 )
(BLAST)

001: MMFSVTVAIL VCLIGYIYRS FKPPPPRICG HPNGPPVTSP RIKLSDGRYL AYRESGVDRD NANYKIIVVH GFNSSKDTEF PIPKDVIEEL GIYFVFYDRA
101: GYGESDPHPS RTVKSEAYDI QELADKLKIG PKFYVLGISL GAYSVYSCLK YIPHRLAGAV LMVPFVNYWW TKVPQEKLSK ALELMPKKDQ WTFKVAHYVP
201: WLLYWWLTQK LFPSSSMVTG NNALCSDKDL VVIKKKMENP RPGLEKVRQQ GDHECLHRDM IAGFATWEFD PTELENPFAE GEGSVHVWQG MEDRIIPYEI
301: NRYISEKLPW IKYHEVLGYG HLLNAEEEKC KDIIKALLVN

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FMQ5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.