Factsheet for Bra002413.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92349	Canola	endoplasmic reticulum, golgi	97.94	97.94
Bra020194.1-P	Field mustard	cytosol	65.29	84.09
AT5G22460.1	Thale cress	endoplasmic reticulum	80.0	80.0
Bra006627.1-P	Field mustard	extracellular, golgi	79.71	79.24
Bra041127.1-P	Field mustard	cytosol	21.47	58.4
KRH26627	Soybean	endoplasmic reticulum, extracellular, golgi	57.06	57.74
VIT_06s0080g00310.t01	Wine grape	extracellular	57.94	56.13
PGSC0003DMT400019164	Potato	extracellular, golgi	55.59	55.59
EES15681	Sorghum	golgi, plasma membrane, vacuole	52.94	51.87
TraesCS5D01G136100.2	Wheat	golgi	52.06	51.01
TraesCS5A01G128500.2	Wheat	golgi	52.06	51.01
Os12t0152100-01	Rice	plasma membrane	50.29	49.85
Solyc11g067260.1.1	Tomato	plastid	55.29	48.7
Bra018063.1-P	Field mustard	extracellular, golgi	48.82	46.5
Bra021364.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	47.94	46.31
Bra015923.1-P	Field mustard	endoplasmic reticulum, golgi	48.82	45.73
Bra005286.1-P	Field mustard	plastid	48.82	45.73
HORVU5Hr1G042290.8	Barley	golgi	52.35	45.41
Zm00001d044704_P018	Maize	plasma membrane	52.35	45.18
Zm00001d042780_P001	Maize	endoplasmic reticulum, vacuole	47.06	44.44
Os01t0859200-01	Rice	plasma membrane	45.29	44.38
EES01786	Sorghum	endoplasmic reticulum, extracellular	47.35	44.11
Bra038616.1-P	Field mustard	mitochondrion	44.71	43.55
Bra019541.1-P	Field mustard	cytosol, golgi, peroxisome	47.94	42.78
Os12t0152500-00	Rice	cytosol	20.0	42.77
Bra014829.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	42.94	41.71
Bra018636.1-P	Field mustard	cytosol	37.35	39.69
Bra030720.1-P	Field mustard	nucleus	32.65	38.14
Bra019434.1-P	Field mustard	cytosol, mitochondrion	20.88	34.13
Bra032005.1-P	Field mustard	endoplasmic reticulum, extracellular	51.47	27.52
Bra034356.1-P	Field mustard	mitochondrion	43.24	22.93
Bra009556.1-P	Field mustard	cytosol	27.06	17.46
Bra034078.1-P	Field mustard	cytosol, nucleus, plastid	26.18	17.12

Protein Annotations

EnsemblPlants:Bra002413.1	EnsemblPlants:Bra002413.1-P	EnsemblPlantsGene:Bra002413	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
InterPro:IPR029058	PANTHER:PTHR10992	PANTHER:PTHR10992:SF886	PFAM:PF12697	SignalP:SignalP-noTM	SUPFAM:SSF53474
UniParc:UPI00025444A7	UniProt:M4CDY2	MapMan:35.2	:	:	:

Description

AT5G22460 (E=6e-169) | esterase/lipase/thioesterase family protein

Coordinates

chrA10:+:9744423..9746410

Molecular Weight (calculated)

38842.9 Da

IEP (calculated)

6.582

GRAVY (calculated)

-0.156

Length

340 amino acids

Sequence
(BLAST)

001: MMLPVIVAIV VCLASYIYRS LKPPPPRVCG VPHGPPITSP RIKLSDGRYL AYRESGVDRA SANHKIIVVH GFNNSKDMEL PISKDLVEEL GICFLFFDRA
101: GYGESDPHPS RTVKSEAYDI QELADKLNIG PKFYVIGLSV GAYSVYSCLK YIPHRLAGAV LVVPFVSYWW TKVPQDILCK AFKLLPEDVR WTFRVAHYVP
201: WLLYWWLTQK WFPSSSIISG NSALLSDTDL VIIKKMLENP NPQTEKVRQQ GDHECLHRDM IAGFATWEFD PTELENPFTE GGGSVHMWQG TEDRFVPREI
301: NEYISKKLPW IKYHEVQGYG HLLSEEEQKC EDIIKALLVE

Best Arabidopsis Sequence Match ( AT5G22460.1 )
(BLAST)

001: MMFSVTVAIL VCLIGYIYRS FKPPPPRICG HPNGPPVTSP RIKLSDGRYL AYRESGVDRD NANYKIIVVH GFNSSKDTEF PIPKDVIEEL GIYFVFYDRA
101: GYGESDPHPS RTVKSEAYDI QELADKLKIG PKFYVLGISL GAYSVYSCLK YIPHRLAGAV LMVPFVNYWW TKVPQEKLSK ALELMPKKDQ WTFKVAHYVP
201: WLLYWWLTQK LFPSSSMVTG NNALCSDKDL VVIKKKMENP RPGLEKVRQQ GDHECLHRDM IAGFATWEFD PTELENPFAE GEGSVHVWQG MEDRIIPYEI
301: NRYISEKLPW IKYHEVLGYG HLLNAEEEKC KDIIKALLVN

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FMQ5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.