Factsheet for PGSC0003DMT400019164

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 7
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g067260.1.1	Tomato	plastid	91.47	80.57
VIT_06s0080g00310.t01	Wine grape	extracellular	66.76	64.67
KRH26627	Soybean	endoplasmic reticulum, extracellular, golgi	59.12	59.82
AT5G22460.1	Thale cress	endoplasmic reticulum	56.18	56.18
CDY26931	Canola	endoplasmic reticulum, extracellular	55.88	55.88
Bra002413.1-P	Field mustard	endoplasmic reticulum, golgi	55.59	55.59
CDX92349	Canola	endoplasmic reticulum, golgi	55.59	55.59
CDY09141	Canola	endoplasmic reticulum, golgi	54.41	54.25
Os12t0152100-01	Rice	plasma membrane	54.12	53.64
Bra006627.1-P	Field mustard	extracellular, golgi	53.82	53.51
CDX88793	Canola	extracellular, golgi	53.82	53.51
Bra020194.1-P	Field mustard	cytosol	41.18	53.03
EES15681	Sorghum	golgi, plasma membrane, vacuole	54.12	53.03
TraesCS5A01G128500.2	Wheat	golgi	53.82	52.74
TraesCS5D01G136100.2	Wheat	golgi	53.24	52.16
Os01t0859200-01	Rice	plasma membrane	53.24	52.16
AT3G03240.1	Thale cress	extracellular	48.82	49.85
Zm00001d042780_P001	Maize	endoplasmic reticulum, vacuole	52.65	49.72
CDY67187	Canola	extracellular, golgi	48.53	49.55
CDX71001	Canola	extracellular	31.47	49.31
CDY43139	Canola	extracellular, golgi	47.94	48.95
CDY43140	Canola	extracellular	47.65	48.65
PGSC0003DMT400006848	Potato	plastid	52.65	48.38
EES01786	Sorghum	endoplasmic reticulum, extracellular	51.76	48.22
PGSC0003DMT400061630	Potato	endoplasmic reticulum, extracellular, golgi	50.29	48.17
AT3G03230.1	Thale cress	extracellular	47.06	48.05
Os12t0152500-00	Rice	cytosol	22.35	47.8
CDY67186	Canola	extracellular	44.12	47.47
CDY21213	Canola	extracellular	46.47	47.45
CDY49935	Canola	extracellular	46.18	47.15
CDY68104	Canola	cytosol	22.35	46.63
HORVU5Hr1G042290.8	Barley	golgi	53.53	46.43
Zm00001d044704_P018	Maize	plasma membrane	53.53	46.19
PGSC0003DMT400006847	Potato	golgi, mitochondrion, peroxisome, plastid	50.29	45.48
PGSC0003DMT400018400	Potato	extracellular	46.18	44.35
CDY21214	Canola	endoplasmic reticulum, golgi, plastid	45.59	44.03
Bra021364.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	45.59	44.03
PGSC0003DMT400060120	Potato	extracellular, golgi, vacuole	44.12	43.99
CDY49934	Canola	endoplasmic reticulum, golgi	45.29	43.75
PGSC0003DMT400030589	Potato	extracellular	45.29	43.5
PGSC0003DMT400061634	Potato	plastid	52.35	43.41
PGSC0003DMT400006849	Potato	mitochondrion, plastid	47.94	42.89
PGSC0003DMT400030553	Potato	cytosol	40.59	42.72
CDY35686	Canola	endoplasmic reticulum, golgi	53.82	32.28
Bra032005.1-P	Field mustard	endoplasmic reticulum, extracellular	47.94	25.63
PGSC0003DMT400004379	Potato	cytosol	28.24	18.15
PGSC0003DMT400070409	Potato	cytosol, peroxisome, plastid	25.88	16.21

Protein Annotations

EnsemblPlants:PGSC0003DMT400019164	EnsemblPlantsGene:PGSC0003DMG402007414	EntrezGene:102603730	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR10992	PANTHER:PTHR10992:SF886	PFAM:PF12146	PGSC:PGSC0003DMG402007414	RefSeq:XP_006349120.1
SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF53474	UniParc:UPI000295DD66	UniProt:M1ABP3	MapMan:35.2

Description

Esterase/lipase/thioesterase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG402007414]

Coordinates

chr11:+:40180555..40188913

Molecular Weight (calculated)

38576.6 Da

IEP (calculated)

6.896

GRAVY (calculated)

-0.200

Length

340 amino acids

Sequence
(BLAST)

001: MITQIAVATT VGLLGWAYLA LLKPPPPKVC GSPGGPPVTS PRVQLNDGRY VAYKESGVSK EKAKHKIIII HGFDSSKDLM LPISQDLMQE LEIYVLQYDR
101: AGYGESDPHP KRSVKSEAFD VEELADKLQL GPKFYVVGLS MGAYCVWSCL KYIPNRLAGV ALVVPFVNYW WSCYPAKLSN EALGKMLAQD QRTFRIAHYA
201: PWLVHWWMNQ KWFHALSMME GNMAIFCPPD QEMLKQLSSA PSPGQEKVRQ QGEFECLYRD LIVGFGNWDF APTDIKNPFP DNEGSVHLWQ GHNDIIIPRE
301: LNSYLAEKLP WIQYHEVPNA GHLIIHNASY CETILRKLLE

Best Arabidopsis Sequence Match ( AT5G22460.1 )
(BLAST)

001: MMFSVTVAIL VCLIGYIYRS FKPPPPRICG HPNGPPVTSP RIKLSDGRYL AYRESGVDRD NANYKIIVVH GFNSSKDTEF PIPKDVIEEL GIYFVFYDRA
101: GYGESDPHPS RTVKSEAYDI QELADKLKIG PKFYVLGISL GAYSVYSCLK YIPHRLAGAV LMVPFVNYWW TKVPQEKLSK ALELMPKKDQ WTFKVAHYVP
201: WLLYWWLTQK LFPSSSMVTG NNALCSDKDL VVIKKKMENP RPGLEKVRQQ GDHECLHRDM IAGFATWEFD PTELENPFAE GEGSVHVWQG MEDRIIPYEI
301: NRYISEKLPW IKYHEVLGYG HLLNAEEEKC KDIIKALLVN

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FMQ5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.