Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 6
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g055290.2.1 | Tomato | extracellular, golgi | 96.48 | 94.81 |
| VIT_13s0106g00780.t01 | Wine grape | mitochondrion | 58.36 | 53.21 |
| PGSC0003DMT400061630 | Potato | endoplasmic reticulum, extracellular, golgi | 53.67 | 51.55 |
| KRH33274 | Soybean | extracellular, golgi, vacuole | 49.56 | 49.27 |
| GSMUA_Achr11P... | Banana | mitochondrion | 52.2 | 47.98 |
| PGSC0003DMT400006847 | Potato | golgi, mitochondrion, peroxisome, plastid | 52.79 | 47.87 |
| PGSC0003DMT400006849 | Potato | mitochondrion, plastid | 52.79 | 47.37 |
| PGSC0003DMT400006848 | Potato | plastid | 51.32 | 47.3 |
| OQU81513 | Sorghum | cytosol | 28.15 | 46.83 |
| Os02t0532300-02 | Rice | plasma membrane | 49.56 | 45.43 |
| TraesCS2B01G310800.1 | Wheat | endoplasmic reticulum, golgi, plastid | 47.8 | 45.28 |
| TraesCS2D01G292100.1 | Wheat | plastid | 47.8 | 45.28 |
| Os04t0411800-01 | Rice | endoplasmic reticulum, golgi | 45.45 | 45.06 |
| HORVU6Hr1G033060.1 | Barley | plastid | 48.68 | 44.99 |
| TraesCS2A01G294400.1 | Wheat | plastid | 46.92 | 44.44 |
| HORVU2Hr1G072830.4 | Barley | endoplasmic reticulum, golgi | 48.39 | 44.35 |
| PGSC0003DMT400061634 | Potato | plastid | 53.08 | 44.15 |
| PGSC0003DMT400019164 | Potato | extracellular, golgi | 43.99 | 44.12 |
| Zm00001d016696_P002 | Maize | extracellular, plasma membrane | 46.92 | 43.96 |
| TraesCS6B01G191000.1 | Wheat | plastid | 47.51 | 43.9 |
| EES05176 | Sorghum | plastid | 47.21 | 43.87 |
| TraesCS6D01G152300.1 | Wheat | plastid | 47.21 | 43.4 |
| Bra014829.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 44.28 | 43.14 |
| CDX76158 | Canola | endoplasmic reticulum, golgi, vacuole | 44.28 | 43.14 |
| TraesCS6A01G160400.1 | Wheat | plastid | 46.92 | 43.13 |
| AT3G54240.1 | Thale cress | extracellular, golgi, vacuole | 43.99 | 42.86 |
| CDY65400 | Canola | endoplasmic reticulum, golgi, vacuole | 43.99 | 42.86 |
| TraesCS1D01G269000.1 | Wheat | plastid | 45.75 | 42.51 |
| EES04288 | Sorghum | extracellular | 44.28 | 41.94 |
| EES10737 | Sorghum | endoplasmic reticulum, golgi, plastid, vacuole | 46.33 | 41.69 |
| HORVU1Hr1G074380.4 | Barley | golgi | 42.23 | 39.24 |
| Zm00001d003800_P011 | Maize | extracellular | 46.92 | 39.12 |
| Os04t0412000-01 | Rice | plasma membrane | 44.87 | 39.03 |
| PGSC0003DMT400030589 | Potato | extracellular | 40.47 | 38.98 |
| TraesCS1A01G268900.1 | Wheat | plastid | 45.75 | 38.61 |
| PGSC0003DMT400018400 | Potato | extracellular | 39.0 | 37.57 |
| PGSC0003DMT400030553 | Potato | cytosol | 33.72 | 35.6 |
| EER89183 | Sorghum | cytosol | 25.51 | 30.53 |
| PGSC0003DMT400004379 | Potato | cytosol | 27.57 | 17.77 |
| PGSC0003DMT400070409 | Potato | cytosol, peroxisome, plastid | 25.81 | 16.21 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400060120 | EnsemblPlantsGene:PGSC0003DMG400023390 | EntrezGene:102594761 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 |
| InterPro:IPR029058 | MEROPS:S33.A78 | PANTHER:PTHR10992 | PANTHER:PTHR10992:SF976 | PFAM:PF12697 | PGSC:PGSC0003DMG400023390 |
| RefSeq:XP_006346001.1 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF53474 | TMHMM:TMhelix | UniParc:UPI000294EE1F |
| UniProt:M1C598 | MapMan:35.2 | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400023390]
Coordinates
chr5:-:50964389..50968088
Molecular Weight (calculated)
39181.2 Da
IEP (calculated)
8.614
GRAVY (calculated)
-0.248
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRVVLLALP VVLLSLIYRA IIPPPPRSCS AAGVPSQTPK IKLRDGRNLV YKEYGVPKNI AKYNVIYVHS FGGSKFEASL IIPQAIEELG VYFVSFDRPG
101: YGKSDPHPKR SFKSLALDIE EVADQLELGN KFYVIGFAMG AHFVWGCLKY IPHRLAGAAL LAPAINYWWP GFPSNLTKEA YEKQLTRDQW VYKVAYYTPW
201: LMYWWNTQQY FPGFSVITGE FKLSQKDLKI AYSLDEMQLQ QAYVTQQGEF ESLHRDLIIG FGKPEFDPMD MKNPYYNNDG NIHLWHGVED GIVSVKLQNF
301: IAKKNPWINY HELQDAGHLF PCGDDSIKYD IWKALLNHEK K
101: YGKSDPHPKR SFKSLALDIE EVADQLELGN KFYVIGFAMG AHFVWGCLKY IPHRLAGAAL LAPAINYWWP GFPSNLTKEA YEKQLTRDQW VYKVAYYTPW
201: LMYWWNTQQY FPGFSVITGE FKLSQKDLKI AYSLDEMQLQ QAYVTQQGEF ESLHRDLIIG FGKPEFDPMD MKNPYYNNDG NIHLWHGVED GIVSVKLQNF
301: IAKKNPWINY HELQDAGHLF PCGDDSIKYD IWKALLNHEK K
001: MAIGPSSVII IVGIILALTY QSILKPPPPN LCGSPGGPPI TAPRIKLRDG RHLAYKEYGL PREKAKHKIV FIHGSDSCRH DAVFATLLSP DLVQERGVYM
101: VSFDKPGYGE SDPDPIRTPK SLALDIEELA DQLSLGSKFY VIGKSMGGQA AWGCLKYTPH RLAGVTLVAP VVNYYWRNLP LNISTEGFNL QQKRDQWAVR
201: VAHYAPWLIY WWNTQNWFPG SSVVNRDGGV LSQPDKDIIL KLGSSRKPHL AEVRQQGIHE SINRDMIVGF GNWEFDPLEL ENPFLNREGS VHLWQGDEDM
301: LVPVTLQRYI ADKLPWLHYH EVAGGGHFFP LAKGVVDEIV KTALNH
101: VSFDKPGYGE SDPDPIRTPK SLALDIEELA DQLSLGSKFY VIGKSMGGQA AWGCLKYTPH RLAGVTLVAP VVNYYWRNLP LNISTEGFNL QQKRDQWAVR
201: VAHYAPWLIY WWNTQNWFPG SSVVNRDGGV LSQPDKDIIL KLGSSRKPHL AEVRQQGIHE SINRDMIVGF GNWEFDPLEL ENPFLNREGS VHLWQGDEDM
301: LVPVTLQRYI ADKLPWLHYH EVAGGGHFFP LAKGVVDEIV KTALNH
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C915]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.