Factsheet for VIT_13s0106g00780.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0007g03440.t01	Wine grape	plastid	72.46	71.88
KRH33274	Soybean	extracellular, golgi, vacuole	58.02	63.27
GSMUA_Achr11P...	Banana	mitochondrion	61.5	61.99
PGSC0003DMT400061630	Potato	endoplasmic reticulum, extracellular, golgi	56.15	59.15
PGSC0003DMT400060120	Potato	extracellular, golgi, vacuole	53.21	58.36
Os04t0411800-01	Rice	endoplasmic reticulum, golgi	53.21	57.85
HORVU6Hr1G033060.1	Barley	plastid	56.95	57.72
CDY65400	Canola	endoplasmic reticulum, golgi, vacuole	53.74	57.43
Solyc05g055290.2.1	Tomato	extracellular, golgi	53.21	57.35
Bra014829.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	53.48	57.14
CDX76158	Canola	endoplasmic reticulum, golgi, vacuole	53.48	57.14
Os02t0532300-02	Rice	plasma membrane	56.68	56.99
TraesCS6B01G191000.1	Wheat	plastid	55.88	56.64
TraesCS6D01G152300.1	Wheat	plastid	55.88	56.33
AT3G54240.1	Thale cress	extracellular, golgi, vacuole	52.67	56.29
EES05176	Sorghum	plastid	55.08	56.13
VIT_06s0080g00320.t01	Wine grape	extracellular, plasma membrane	52.67	55.97
TraesCS6A01G160400.1	Wheat	plastid	55.08	55.53
Zm00001d016696_P002	Maize	extracellular, plasma membrane	54.01	55.49
PGSC0003DMT400061634	Potato	plastid	60.16	54.88
TraesCS2B01G310800.1	Wheat	endoplasmic reticulum, golgi, plastid	52.67	54.72
OQU81513	Sorghum	cytosol	29.95	54.63
TraesCS2D01G292100.1	Wheat	plastid	52.41	54.44
Solyc11g007040.1.1	Tomato	plastid	58.82	54.32
TraesCS2A01G294400.1	Wheat	plastid	52.14	54.17
EES10737	Sorghum	endoplasmic reticulum, golgi, plastid, vacuole	54.01	53.3
HORVU2Hr1G072830.4	Barley	endoplasmic reticulum, golgi	52.41	52.69
VIT_15s0048g02060.t01	Wine grape	plastid	43.05	52.61
VIT_03s0017g02230.t01	Wine grape	cytosol	22.19	52.53
TraesCS1D01G269000.1	Wheat	plastid	51.34	52.32
VIT_06s0080g00310.t01	Wine grape	extracellular	48.4	51.57
VIT_15s0048g02050.t01	Wine grape	cytosol	45.19	51.52
Solyc11g007030.1.1	Tomato	extracellular, mitochondrion	57.49	51.07
EES04288	Sorghum	extracellular	48.66	50.56
Os04t0412000-01	Rice	plasma membrane	52.41	50.0
HORVU1Hr1G074380.4	Barley	golgi	48.4	49.32
VIT_06s0080g00330.t01	Wine grape	vacuole	44.65	47.99
Zm00001d003800_P011	Maize	extracellular	51.87	47.43
TraesCS1A01G268900.1	Wheat	plastid	50.53	46.78
EER89183	Sorghum	cytosol	24.33	31.93
VIT_06s0004g03310.t01	Wine grape	cytosol	27.81	21.18
VIT_08s0040g02380.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	27.81	20.55

Protein Annotations

EntrezGene:100256822	wikigene:100256822	Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
EMBL:AM433143	ProteinID:CAN82520	ProteinID:CAN82520.1	ProteinID:CBI35262	ProteinID:CBI35262.3	UniProt:D7TXN7
EMBL:FN596257	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787	InterPro:IPR029058	EntrezGene:LOC100256822
wikigene:LOC100256822	PFAM:PF12697	PANTHER:PTHR10992	PANTHER:PTHR10992:SF740	SUPFAM:SSF53474	TIGR:TC69452
TMHMM:TMhelix	UniParc:UPI00019858D7	ArrayExpress:VIT_13s0106g00780	EnsemblPlantsGene:VIT_13s0106g00780	EnsemblPlants:VIT_13s0106g00780.t01	unigene:Vvi.9044
RefSeq:XP_002266006	RefSeq:XP_002266006.1	RefSeq:XP_010658791.1	RefSeq:XP_010658792.1	RefSeq:XP_010658793.1	:

Description

No Description!

Coordinates

chr13:+:10639987..10643575

Molecular Weight (calculated)

41819.6 Da

IEP (calculated)

9.532

GRAVY (calculated)

-0.248

Length

374 amino acids

Sequence
(BLAST)

001: MAGVSRKISA ASARSHTRKS RHNTSKLPSG MLKNIILVLL IGLLSWGYQA ARPPPPKICG SPGGPAITAH RIKLRDGRHL AYKEHGVSKQ VAKYKIIFFH
101: GFGSTRHEAI IGTHMSPGSV EELGVYVVSF DRPGYGESDP NPKRTMKSLA LDVEELADQL ELGPKFYVVG YSMGGQAVWG CLKYIPHRLA GATLIAPVIN
201: YWWPGFPANL SKEAYYQQFP QDQWALRVAH YTPWLTYWWN TQKLFPASSV IGGKPQLSRK DMEIIQQMPA RPRHLMLQAS QQGEFESIHR DLMIGFGSWE
301: FDPLELENPF PNNEGSVHIW QGDEDGLVPV MLQRYIAGKL SWIQYHEVPG AGHLFPIADG MTDVIVKALL LGEK

Best Arabidopsis Sequence Match ( AT3G48410.2 )
(BLAST)

001: MFIYKDKKII KKLALKQRYC YCLTKFSSGK RVRKFPRERG ERMAGEEIER EKKSAASART HTRNNTQQSS SSGYLKTLLL VTFVGVLAWV YQTIQPPPAK
101: IVGSPGGPTV TSPRIKLRDG RHLAYTEFGI PRDEAKFKII NIHGFDSCMR DSHFANFLSP ALVEELRIYI VSFDRPGYGE SDPNLNGSPR SIALDIEELA
201: DGLGLGPQFY LFGYSMGGEI TWACLNYIPH RLAGAALVAP AINYWWRNLP GDLTREAFSL MHPADQWSLR VAHYAPWLTY WWNTQKWFPI SNVIAGNPII
301: FSRQDMEILS KLGFVNPNRA YIRQQGEYVS LHRDLNVAFS SWEFDPLDLQ DPFPNNNGSV HVWNGDEDKF VPVKLQRYVA SKLPWIRYHE ISGSGHFVPF
401: VEGMTDKIIK SLLVGEEDVS ESREASV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMU3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.