Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65400 | Canola | endoplasmic reticulum, golgi, vacuole | 89.71 | 89.71 |
| CDX76158 | Canola | endoplasmic reticulum, golgi, vacuole | 89.71 | 89.71 |
| Bra014829.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 89.43 | 89.43 |
| VIT_13s0106g00780.t01 | Wine grape | mitochondrion | 56.29 | 52.67 |
| KRH33274 | Soybean | extracellular, golgi, vacuole | 51.43 | 52.48 |
| AT1G74300.1 | Thale cress | extracellular | 49.71 | 50.29 |
| AT2G36290.1 | Thale cress | plastid | 51.43 | 49.45 |
| HORVU6Hr1G033060.1 | Barley | plastid | 50.86 | 48.24 |
| AT1G74280.1 | Thale cress | golgi, mitochondrion | 50.57 | 47.58 |
| GSMUA_Achr11P... | Banana | mitochondrion | 50.0 | 47.17 |
| TraesCS6B01G191000.1 | Wheat | plastid | 49.71 | 47.15 |
| Os04t0411800-01 | Rice | endoplasmic reticulum, golgi | 46.29 | 47.09 |
| Zm00001d016696_P002 | Maize | extracellular, plasma membrane | 48.86 | 46.98 |
| EES05176 | Sorghum | plastid | 49.14 | 46.87 |
| TraesCS6D01G152300.1 | Wheat | plastid | 49.43 | 46.63 |
| PGSC0003DMT400061630 | Potato | endoplasmic reticulum, extracellular, golgi | 47.14 | 46.48 |
| TraesCS6A01G160400.1 | Wheat | plastid | 49.14 | 46.36 |
| Os02t0532300-02 | Rice | plasma membrane | 49.14 | 46.24 |
| AT1G74290.1 | Thale cress | mitochondrion | 48.86 | 46.09 |
| Solyc11g007040.1.1 | Tomato | plastid | 51.71 | 44.69 |
| EES04288 | Sorghum | extracellular | 45.71 | 44.44 |
| OQU81513 | Sorghum | cytosol | 26.0 | 44.39 |
| AT5G22460.1 | Thale cress | endoplasmic reticulum | 42.86 | 44.12 |
| PGSC0003DMT400060120 | Potato | extracellular, golgi, vacuole | 42.86 | 43.99 |
| Solyc05g055290.2.1 | Tomato | extracellular, golgi | 43.43 | 43.8 |
| TraesCS1D01G269000.1 | Wheat | plastid | 45.71 | 43.6 |
| PGSC0003DMT400061634 | Potato | plastid | 50.86 | 43.41 |
| TraesCS2B01G310800.1 | Wheat | endoplasmic reticulum, golgi, plastid | 44.29 | 43.06 |
| TraesCS2A01G294400.1 | Wheat | plastid | 44.0 | 42.78 |
| Os04t0412000-01 | Rice | plasma membrane | 47.71 | 42.6 |
| TraesCS2D01G292100.1 | Wheat | plastid | 43.71 | 42.5 |
| EES10737 | Sorghum | endoplasmic reticulum, golgi, plastid, vacuole | 46.0 | 42.48 |
| HORVU1Hr1G074380.4 | Barley | golgi | 44.29 | 42.23 |
| HORVU2Hr1G072830.4 | Barley | endoplasmic reticulum, golgi | 43.43 | 40.86 |
| Zm00001d003800_P011 | Maize | extracellular | 46.57 | 39.85 |
| Solyc11g007030.1.1 | Tomato | extracellular, mitochondrion | 47.71 | 39.67 |
| TraesCS1A01G268900.1 | Wheat | plastid | 45.43 | 39.36 |
| AT3G44510.2 | Thale cress | cytosol | 36.0 | 38.77 |
| AT3G48410.2 | Thale cress | mitochondrion | 46.29 | 37.94 |
| AT3G03240.1 | Thale cress | extracellular | 36.0 | 37.84 |
| AT3G03230.1 | Thale cress | extracellular | 35.71 | 37.54 |
| AT1G08310.2 | Thale cress | cytosol | 32.57 | 35.85 |
| EER89183 | Sorghum | cytosol | 22.86 | 28.07 |
| AT5G02970.1 | Thale cress | cytosol | 26.29 | 17.9 |
| AT3G09690.1 | Thale cress | cytosol | 25.43 | 16.89 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | EntrezGene:824591 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 | ProteinID:AEE79203.1 |
| ArrayExpress:AT3G54240 | EnsemblPlantsGene:AT3G54240 | RefSeq:AT3G54240 | TAIR:AT3G54240 | RefSeq:AT3G54240-TAIR-G | EnsemblPlants:AT3G54240.1 |
| TAIR:AT3G54240.1 | EMBL:DQ056623 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 | InterPro:IPR029058 |
| RefSeq:NP_190992.1 | PFAM:PF12697 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007616 | PO:PO:0009010 |
| PO:PO:0009031 | PO:PO:0009046 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR10992 | PANTHER:PTHR10992:SF740 |
| UniProt:Q4PSL3 | SUPFAM:SSF53474 | TMHMM:TMhelix | UniParc:UPI0000163710 | : | : |
Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q4PSL3]
Coordinates
chr3:+:20080856..20082360
Molecular Weight (calculated)
39466.6 Da
IEP (calculated)
9.657
GRAVY (calculated)
-0.243
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKWLITGAV VIVLIGLGAW AIVSITPPPP KRCGTPGGPP ITAPRIRLSD GRYLAYEEHG VSRQNATFKI VFIHAFSTFR RDAVIANRVR PGFLEKNGIY
101: VVSYDRPGYG ESDPHSSRNE KTLAHDVEQL ADQLQLGSKF YVVGYSMGGQ AVWGVLKYIP HRLAGATLLC PVTNSWWPSF PDSLTWELWN KQSKSERFSM
201: LITHHTPWLL YWWNNQKLFS TTAVMQSSPN MFSPQDLALL PKLAARVSYK NQTTQQGTHE SLDRDLIVGF GKWSFDPMKI ENPFPKGEGS VHMWQGDDDR
301: LVPIQLQRII AQKLTWIKYH EIPGAGHIFP MADGMAETIL KELLPIPQSS
101: VVSYDRPGYG ESDPHSSRNE KTLAHDVEQL ADQLQLGSKF YVVGYSMGGQ AVWGVLKYIP HRLAGATLLC PVTNSWWPSF PDSLTWELWN KQSKSERFSM
201: LITHHTPWLL YWWNNQKLFS TTAVMQSSPN MFSPQDLALL PKLAARVSYK NQTTQQGTHE SLDRDLIVGF GKWSFDPMKI ENPFPKGEGS VHMWQGDDDR
301: LVPIQLQRII AQKLTWIKYH EIPGAGHIFP MADGMAETIL KELLPIPQSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.