Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 4
- golgi 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49719 | Canola | extracellular | 67.92 | 84.55 |
| Bra018063.1-P | Field mustard | extracellular, golgi | 69.09 | 82.63 |
| CDY39579 | Canola | cytosol, endoplasmic reticulum, peroxisome | 71.19 | 81.5 |
| CDY21822 | Canola | cytosol, golgi, peroxisome | 68.85 | 77.17 |
| CDX77906 | Canola | cytosol, golgi, peroxisome | 67.21 | 76.74 |
| Bra019541.1-P | Field mustard | cytosol, golgi, peroxisome | 68.38 | 76.64 |
| AT2G36290.1 | Thale cress | plastid | 48.71 | 57.14 |
| AT1G74300.1 | Thale cress | extracellular | 45.2 | 55.78 |
| AT1G74290.1 | Thale cress | mitochondrion | 45.43 | 52.29 |
| AT1G74280.1 | Thale cress | golgi, mitochondrion | 44.73 | 51.34 |
| AT3G54240.1 | Thale cress | extracellular, golgi, vacuole | 37.94 | 46.29 |
| AT5G22460.1 | Thale cress | endoplasmic reticulum | 36.3 | 45.59 |
| AT3G03240.1 | Thale cress | extracellular | 33.96 | 43.54 |
| AT3G44510.2 | Thale cress | cytosol | 32.08 | 42.15 |
| AT3G03230.1 | Thale cress | extracellular | 32.79 | 42.04 |
| AT1G08310.2 | Thale cress | cytosol | 30.91 | 41.51 |
| AT5G02970.1 | Thale cress | cytosol | 21.31 | 17.7 |
| AT3G09690.1 | Thale cress | cytosol | 20.37 | 16.51 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | EntrezGene:823999 | UniProt:A0A1I9LMU3 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 |
| ProteinID:AEE78413.1 | ProteinID:ANM63901.1 | ArrayExpress:AT3G48410 | EnsemblPlantsGene:AT3G48410 | RefSeq:AT3G48410 | TAIR:AT3G48410 |
| RefSeq:AT3G48410-TAIR-G | EnsemblPlants:AT3G48410.2 | EMBL:AY065282 | ProteinID:CAB41157.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | InterPro:IPR029058 | RefSeq:NP_001325962.1 | RefSeq:NP_190412.1 | PFAM:PF12697 |
| PANTHER:PTHR10992 | PANTHER:PTHR10992:SF740 | SUPFAM:SSF53474 | TMHMM:TMhelix | UniParc:UPI000849670C | SEG:seg |
Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMU3]
Coordinates
chr3:-:17923622..17928280
Molecular Weight (calculated)
48646.1 Da
IEP (calculated)
9.096
GRAVY (calculated)
-0.330
Length
427 amino acids
Sequence
(BLAST)
(BLAST)
001: MFIYKDKKII KKLALKQRYC YCLTKFSSGK RVRKFPRERG ERMAGEEIER EKKSAASART HTRNNTQQSS SSGYLKTLLL VTFVGVLAWV YQTIQPPPAK
101: IVGSPGGPTV TSPRIKLRDG RHLAYTEFGI PRDEAKFKII NIHGFDSCMR DSHFANFLSP ALVEELRIYI VSFDRPGYGE SDPNLNGSPR SIALDIEELA
201: DGLGLGPQFY LFGYSMGGEI TWACLNYIPH RLAGAALVAP AINYWWRNLP GDLTREAFSL MHPADQWSLR VAHYAPWLTY WWNTQKWFPI SNVIAGNPII
301: FSRQDMEILS KLGFVNPNRA YIRQQGEYVS LHRDLNVAFS SWEFDPLDLQ DPFPNNNGSV HVWNGDEDKF VPVKLQRYVA SKLPWIRYHE ISGSGHFVPF
401: VEGMTDKIIK SLLVGEEDVS ESREASV
101: IVGSPGGPTV TSPRIKLRDG RHLAYTEFGI PRDEAKFKII NIHGFDSCMR DSHFANFLSP ALVEELRIYI VSFDRPGYGE SDPNLNGSPR SIALDIEELA
201: DGLGLGPQFY LFGYSMGGEI TWACLNYIPH RLAGAALVAP AINYWWRNLP GDLTREAFSL MHPADQWSLR VAHYAPWLTY WWNTQKWFPI SNVIAGNPII
301: FSRQDMEILS KLGFVNPNRA YIRQQGEYVS LHRDLNVAFS SWEFDPLDLQ DPFPNNNGSV HVWNGDEDKF VPVKLQRYVA SKLPWIRYHE ISGSGHFVPF
401: VEGMTDKIIK SLLVGEEDVS ESREASV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.