Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G74290.1 | Thale cress | mitochondrion | 89.52 | 89.76 |
| AT1G74300.1 | Thale cress | extracellular | 76.34 | 82.08 |
| CDX96530 | Canola | endoplasmic reticulum, golgi | 72.58 | 74.38 |
| Bra015923.1-P | Field mustard | endoplasmic reticulum, golgi | 71.77 | 73.55 |
| CDX73073 | Canola | endoplasmic reticulum, golgi, mitochondrion, vacuole | 69.89 | 72.22 |
| AT2G36290.1 | Thale cress | plastid | 61.56 | 62.91 |
| Solyc09g009550.2.1 | Tomato | endoplasmic reticulum | 54.57 | 58.33 |
| VIT_08s0007g03440.t01 | Wine grape | plastid | 57.8 | 57.03 |
| KRH67906 | Soybean | golgi, plastid | 56.72 | 57.03 |
| KRH30836 | Soybean | mitochondrion, plastid | 57.26 | 56.65 |
| Solyc09g009540.2.1 | Tomato | endoplasmic reticulum | 53.49 | 55.74 |
| KRH32735 | Soybean | endoplasmic reticulum | 55.91 | 55.47 |
| Solyc09g009500.2.1 | Tomato | plastid | 54.84 | 55.14 |
| PGSC0003DMT400006848 | Potato | plastid | 54.84 | 55.14 |
| PGSC0003DMT400006847 | Potato | golgi, mitochondrion, peroxisome, plastid | 55.65 | 55.05 |
| Solyc09g009520.2.1 | Tomato | plastid | 55.38 | 54.79 |
| KRG96190 | Soybean | extracellular, plasma membrane | 42.2 | 54.51 |
| Solyc09g009530.2.1 | Tomato | plastid | 50.0 | 53.45 |
| Solyc09g009510.2.1 | Tomato | plastid | 52.96 | 51.84 |
| Os04t0411800-01 | Rice | endoplasmic reticulum, golgi | 47.58 | 51.45 |
| PGSC0003DMT400006849 | Potato | mitochondrion, plastid | 52.42 | 51.32 |
| GSMUA_Achr11P... | Banana | mitochondrion | 51.08 | 51.21 |
| AT3G54240.1 | Thale cress | extracellular, golgi, vacuole | 47.58 | 50.57 |
| Os02t0532300-02 | Rice | plasma membrane | 50.54 | 50.54 |
| HORVU6Hr1G033060.1 | Barley | plastid | 49.73 | 50.14 |
| Zm00001d016696_P002 | Maize | extracellular, plasma membrane | 48.12 | 49.18 |
| TraesCS2D01G292100.1 | Wheat | plastid | 47.31 | 48.89 |
| EES10737 | Sorghum | endoplasmic reticulum, golgi, plastid, vacuole | 49.73 | 48.81 |
| TraesCS6B01G191000.1 | Wheat | plastid | 48.12 | 48.51 |
| EES05176 | Sorghum | plastid | 47.85 | 48.5 |
| TraesCS2B01G310800.1 | Wheat | endoplasmic reticulum, golgi, plastid | 46.77 | 48.33 |
| TraesCS2A01G294400.1 | Wheat | plastid | 46.77 | 48.33 |
| TraesCS6D01G152300.1 | Wheat | plastid | 48.12 | 48.25 |
| HORVU2Hr1G072830.4 | Barley | endoplasmic reticulum, golgi | 48.12 | 48.12 |
| TraesCS6A01G160400.1 | Wheat | plastid | 47.85 | 47.98 |
| AT5G22460.1 | Thale cress | endoplasmic reticulum | 43.55 | 47.65 |
| TraesCS1D01G269000.1 | Wheat | plastid | 46.77 | 47.41 |
| OQU81513 | Sorghum | cytosol | 26.08 | 47.32 |
| EES04288 | Sorghum | extracellular | 45.43 | 46.94 |
| VIT_03s0017g02230.t01 | Wine grape | cytosol | 19.62 | 46.2 |
| HORVU1Hr1G074380.4 | Barley | golgi | 45.43 | 46.05 |
| Os04t0412000-01 | Rice | plasma membrane | 48.12 | 45.66 |
| AT3G48410.2 | Thale cress | mitochondrion | 51.34 | 44.73 |
| AT3G03240.1 | Thale cress | extracellular | 38.71 | 43.24 |
| TraesCS1A01G268900.1 | Wheat | plastid | 46.77 | 43.07 |
| Zm00001d003800_P011 | Maize | extracellular | 47.31 | 43.03 |
| AT3G03230.1 | Thale cress | extracellular | 36.29 | 40.54 |
| AT3G44510.2 | Thale cress | cytosol | 33.6 | 38.46 |
| AT1G08310.2 | Thale cress | cytosol | 31.99 | 37.42 |
| EER89183 | Sorghum | cytosol | 25.0 | 32.63 |
| AT5G02970.1 | Thale cress | cytosol | 26.34 | 19.07 |
| AT3G09690.1 | Thale cress | cytosol | 26.08 | 18.41 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | EntrezGene:843768 | ProteinID:AAG52399.1 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 |
| ProteinID:AEE35573.1 | ArrayExpress:AT1G74280 | EnsemblPlantsGene:AT1G74280 | RefSeq:AT1G74280 | TAIR:AT1G74280 | RefSeq:AT1G74280-TAIR-G |
| EnsemblPlants:AT1G74280.1 | TAIR:AT1G74280.1 | Unigene:At.18150 | EMBL:BT002779 | EMBL:BT004360 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | InterPro:IPR029058 |
| RefSeq:NP_565081.1 | PFAM:PF12697 | PO:PO:0000293 | PANTHER:PTHR10992 | PANTHER:PTHR10992:SF997 | UniProt:Q9C913 |
| MEROPS:S33.A22 | SUPFAM:SSF53474 | TMHMM:TMhelix | UniParc:UPI000000BDBC | SEG:seg | : |
Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C913]
Coordinates
chr1:+:27929643..27931364
Molecular Weight (calculated)
42275.8 Da
IEP (calculated)
9.335
GRAVY (calculated)
-0.308
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRDSSRNSS LKPWPRKKFL FPSVVIVIVG IIVAFTYQSK LKPPPPKLCG SSGGPPITAP RIKLQDGRYL AYKEHGLPRE KANRKIVFIH GSDCCRHDAV
101: FATLLSPDLV EELGVYMVSF DRPGYCESDP HPSRTPRSLV SDIEELADQL SLGSKFYVLG YSMGGQAAWG CLKYIPHRLA GVTLVAPVVN YYWKNLPLNV
201: STEGFNFQQK RDQLAVRVAH YTPWLIYWWN TQKWFPGSSI ANRDHSLLAQ PDKDIISKLG SSRKPHWAEV RQQGIHESIN RDMIVGFGNW EFGPLDLENP
301: FLNKEGSVHL WQGDEDMLVP AKLQRYLAHQ LPWVHYHEVP RSGHFFHYTK GVVDDIVKSL LTSDVRASRV CI
101: FATLLSPDLV EELGVYMVSF DRPGYCESDP HPSRTPRSLV SDIEELADQL SLGSKFYVLG YSMGGQAAWG CLKYIPHRLA GVTLVAPVVN YYWKNLPLNV
201: STEGFNFQQK RDQLAVRVAH YTPWLIYWWN TQKWFPGSSI ANRDHSLLAQ PDKDIISKLG SSRKPHWAEV RQQGIHESIN RDMIVGFGNW EFGPLDLENP
301: FLNKEGSVHL WQGDEDMLVP AKLQRYLAHQ LPWVHYHEVP RSGHFFHYTK GVVDDIVKSL LTSDVRASRV CI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.