Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 4
- vacuole 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| endoplasmic reticulum:
28499913
|
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH30836 | Soybean | mitochondrion, plastid | 88.53 | 88.3 |
| KRH67906 | Soybean | golgi, plastid | 74.4 | 75.41 |
| KRG96190 | Soybean | extracellular, plasma membrane | 56.53 | 73.61 |
| VIT_08s0007g03440.t01 | Wine grape | plastid | 71.73 | 71.35 |
| Solyc09g009500.2.1 | Tomato | plastid | 65.6 | 66.49 |
| PGSC0003DMT400006848 | Potato | plastid | 65.07 | 65.95 |
| Solyc09g009550.2.1 | Tomato | endoplasmic reticulum | 60.53 | 65.23 |
| PGSC0003DMT400006847 | Potato | golgi, mitochondrion, peroxisome, plastid | 65.33 | 65.16 |
| Solyc09g009540.2.1 | Tomato | endoplasmic reticulum | 60.8 | 63.87 |
| Solyc09g009520.2.1 | Tomato | plastid | 62.93 | 62.77 |
| KRH33274 | Soybean | extracellular, golgi, vacuole | 56.27 | 61.52 |
| AT1G74300.1 | Thale cress | extracellular | 56.27 | 60.98 |
| Solyc09g009510.2.1 | Tomato | plastid | 61.33 | 60.53 |
| AT2G36290.1 | Thale cress | plastid | 58.67 | 60.44 |
| PGSC0003DMT400006849 | Potato | mitochondrion, plastid | 60.8 | 60.0 |
| Solyc09g009530.2.1 | Tomato | plastid | 55.47 | 59.77 |
| GSMUA_Achr11P... | Banana | mitochondrion | 58.93 | 59.57 |
| CDX75055 | Canola | plastid | 56.8 | 58.68 |
| Bra005286.1-P | Field mustard | plastid | 56.8 | 58.68 |
| CDX96530 | Canola | endoplasmic reticulum, golgi | 56.53 | 58.4 |
| Bra015923.1-P | Field mustard | endoplasmic reticulum, golgi | 56.0 | 57.85 |
| CDX84140 | Canola | plastid | 55.73 | 57.58 |
| CDX73073 | Canola | endoplasmic reticulum, golgi, mitochondrion, vacuole | 54.93 | 57.22 |
| Os04t0411800-01 | Rice | endoplasmic reticulum, golgi | 51.47 | 56.1 |
| AT1G74290.1 | Thale cress | mitochondrion | 55.47 | 56.06 |
| AT1G74280.1 | Thale cress | golgi, mitochondrion | 55.47 | 55.91 |
| HORVU6Hr1G033060.1 | Barley | plastid | 53.87 | 54.74 |
| EES05176 | Sorghum | plastid | 53.07 | 54.22 |
| TraesCS6B01G191000.1 | Wheat | plastid | 53.33 | 54.2 |
| TraesCS2B01G310800.1 | Wheat | endoplasmic reticulum, golgi, plastid | 52.0 | 54.17 |
| TraesCS2D01G292100.1 | Wheat | plastid | 52.0 | 54.17 |
| VIT_03s0017g02230.t01 | Wine grape | cytosol | 22.67 | 53.8 |
| Os02t0532300-02 | Rice | plasma membrane | 53.33 | 53.76 |
| TraesCS6D01G152300.1 | Wheat | plastid | 53.07 | 53.64 |
| TraesCS2A01G294400.1 | Wheat | plastid | 51.47 | 53.61 |
| TraesCS6A01G160400.1 | Wheat | plastid | 52.8 | 53.37 |
| EES10737 | Sorghum | endoplasmic reticulum, golgi, plastid, vacuole | 53.6 | 53.03 |
| Zm00001d016696_P002 | Maize | extracellular, plasma membrane | 51.47 | 53.02 |
| KRH17703 | Soybean | cytosol | 16.8 | 52.5 |
| HORVU2Hr1G072830.4 | Barley | endoplasmic reticulum, golgi | 51.2 | 51.61 |
| TraesCS1D01G269000.1 | Wheat | plastid | 50.13 | 51.23 |
| EES04288 | Sorghum | extracellular | 47.73 | 49.72 |
| Os04t0412000-01 | Rice | plasma membrane | 51.73 | 49.49 |
| KRH26627 | Soybean | endoplasmic reticulum, extracellular, golgi | 44.27 | 49.4 |
| OQU81513 | Sorghum | cytosol | 26.67 | 48.78 |
| HORVU1Hr1G074380.4 | Barley | golgi | 47.2 | 48.23 |
| KRH30441 | Soybean | cytosol | 30.67 | 46.75 |
| TraesCS1A01G268900.1 | Wheat | plastid | 49.87 | 46.29 |
| Zm00001d003800_P011 | Maize | extracellular | 49.6 | 45.48 |
| KRH25210 | Soybean | cytosol | 41.07 | 43.38 |
| KRH33263 | Soybean | extracellular, golgi | 30.4 | 36.77 |
| EER89183 | Sorghum | cytosol | 26.13 | 34.39 |
| KRG89038 | Soybean | cytosol, golgi, plastid | 25.6 | 19.79 |
| KRH24928 | Soybean | golgi, peroxisome, plasma membrane | 25.87 | 18.87 |
| KRH19822 | Soybean | cytosol | 25.6 | 18.82 |
| KRH32415 | Soybean | endoplasmic reticulum | 25.6 | 18.71 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 | EMBL:ACUP02006155 | EnsemblPlantsGene:GLYMA_10G071500 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 |
| UniProt:I1L9C6 | InterPro:IPR029058 | EnsemblPlants:KRH32735 | ProteinID:KRH32735 | ProteinID:KRH32735.1 | PFAM:PF12697 |
| PANTHER:PTHR10992 | PANTHER:PTHR10992:SF740 | SUPFAM:SSF53474 | TMHMM:TMhelix | UniParc:UPI000233C7B7 | SEG:seg |
Description
hypothetical protein
Coordinates
chr10:+:7237908..7243283
Molecular Weight (calculated)
42010.3 Da
IEP (calculated)
8.774
GRAVY (calculated)
-0.276
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGVNRKIS AASARAHTRR AKKTNSLSLP SGILGTALAV LFIGFLAWAY QVIQPPAPKI CGTSDGPPIT APRIKLRDGR HLAYKEHGVP KDAAKYKIIS
101: VHAFDCCRHD TVVANTLSPD VVEELGLYIV SFDRPGYGES DPDPNRTLKS LALDIEELAD HLGLGSKFYV VGVSMGGQVV WNCLKYIPNR LAGAVLISPV
201: VNYWWPGLPA NLTTEAFSKK KLEDRWALRV AHYIPWLTYW WNTQRWFPAS TAIAHSPDNL SHQDKELVPK MSNRKSYVAQ VRQQGDYETL HRDLNIGFGN
301: WEYSPLDLEN PFPNNEGSVH LWHGDEDLMV PVTLQRYIAQ KLPWIHYHEL QGSGHMFAHA DGMSDTIIKS LLRAK
101: VHAFDCCRHD TVVANTLSPD VVEELGLYIV SFDRPGYGES DPDPNRTLKS LALDIEELAD HLGLGSKFYV VGVSMGGQVV WNCLKYIPNR LAGAVLISPV
201: VNYWWPGLPA NLTTEAFSKK KLEDRWALRV AHYIPWLTYW WNTQRWFPAS TAIAHSPDNL SHQDKELVPK MSNRKSYVAQ VRQQGDYETL HRDLNIGFGN
301: WEYSPLDLEN PFPNNEGSVH LWHGDEDLMV PVTLQRYIAQ KLPWIHYHEL QGSGHMFAHA DGMSDTIIKS LLRAK
001: MAGEEIEREK KSAASARTHT RNNTQQSSSS GYLKTLLLVT FVGVLAWVYQ TIQPPPAKIV GSPGGPTVTS PRIKLRDGRH LAYTEFGIPR DEAKFKIINI
101: HGFDSCMRDS HFANFLSPAL VEELRIYIVS FDRPGYGESD PNLNGSPRSI ALDIEELADG LGLGPQFYLF GYSMGGEITW ACLNYIPHRL AGAALVAPAI
201: NYWWRNLPGD LTREAFSLMH PADQWSLRVA HYAPWLTYWW NTQKWFPISN VIAGNPIIFS RQDMEILSKL GFVNPNRAYI RQQGEYVSLH RDLNVAFSSW
301: EFDPLDLQDP FPNNNGSVHV WNGDEDKFVP VKLQRYVASK LPWIRYHEIS GSGHFVPFVE GMTDKIIKSL LVGEEDVSES REASV
101: HGFDSCMRDS HFANFLSPAL VEELRIYIVS FDRPGYGESD PNLNGSPRSI ALDIEELADG LGLGPQFYLF GYSMGGEITW ACLNYIPHRL AGAALVAPAI
201: NYWWRNLPGD LTREAFSLMH PADQWSLRVA HYAPWLTYWW NTQKWFPISN VIAGNPIIFS RQDMEILSKL GFVNPNRAYI RQQGEYVSLH RDLNVAFSSW
301: EFDPLDLQDP FPNNNGSVHV WNGDEDKFVP VKLQRYVASK LPWIRYHEIS GSGHFVPFVE GMTDKIIKSL LVGEEDVSES REASV
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMU3]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.