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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 2
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:endoplasmic reticulum, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra005286.1-P Field mustard plastid 98.07 98.07
CDX75055 Canola plastid 97.8 97.8
AT2G36290.1 Thale cress plastid 84.02 83.79
CDX96530 Canola endoplasmic reticulum, golgi 66.67 66.67
CDX73073 Canola endoplasmic reticulum, golgi, mitochondrion, vacuole 64.74 65.28
Solyc09g009550.2.1 Tomato endoplasmic reticulum 57.85 60.34
VIT_08s0007g03440.t01 Wine grape plastid 60.88 58.62
Solyc09g009530.2.1 Tomato plastid 55.92 58.33
CDY49719 Canola extracellular 55.1 58.31
Solyc09g009540.2.1 Tomato endoplasmic reticulum 57.3 58.26
Solyc09g009500.2.1 Tomato plastid 58.4 57.3
KRH67906 Soybean golgi, plastid 58.4 57.3
KRH30836 Soybean mitochondrion, plastid 59.23 57.18
PGSC0003DMT400006847 Potato golgi, mitochondrion, peroxisome, plastid 58.95 56.91
PGSC0003DMT400006848 Potato plastid 57.85 56.76
Solyc09g009520.2.1 Tomato plastid 58.68 56.65
KRH32735 Soybean endoplasmic reticulum 57.58 55.73
Os04t0411800-01 Rice endoplasmic reticulum, golgi 52.34 55.23
KRG96190 Soybean extracellular, plasma membrane 43.53 54.86
Solyc09g009510.2.1 Tomato plastid 57.3 54.74
CDY39579 Canola cytosol, endoplasmic reticulum, peroxisome 56.2 54.69
PGSC0003DMT400006849 Potato mitochondrion, plastid 57.02 54.47
GSMUA_Achr11P... Banana mitochondrion 55.65 54.45
CDX77906 Canola cytosol, golgi, peroxisome 55.37 53.74
CDY41508 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 52.62 53.65
HORVU6Hr1G033060.1 Barley plastid 54.27 53.39
CDY65628 Canola cytosol, golgi, peroxisome 52.34 53.37
CDY21822 Canola cytosol, golgi, peroxisome 55.65 53.02
CDY72669 Canola cytosol 17.91 52.0
TraesCS2A01G294400.1 Wheat plastid 51.52 51.94
TraesCS2D01G292100.1 Wheat plastid 50.96 51.39
TraesCS2B01G310800.1 Wheat endoplasmic reticulum, golgi, plastid 50.96 51.39
Zm00001d016696_P002 Maize extracellular, plasma membrane 51.52 51.37
CDY70769 Canola cytosol 17.63 51.2
Os02t0532300-02 Rice plasma membrane 52.34 51.08
EES05176 Sorghum plastid 51.52 50.95
TraesCS6B01G191000.1 Wheat plastid 51.79 50.95
TraesCS6D01G152300.1 Wheat plastid 51.79 50.67
CDX76158 Canola endoplasmic reticulum, golgi, vacuole 48.76 50.57
CDY65400 Canola endoplasmic reticulum, golgi, vacuole 48.48 50.29
TraesCS6A01G160400.1 Wheat plastid 51.24 50.13
OQU81513 Sorghum cytosol 28.1 49.76
HORVU2Hr1G072830.4 Barley endoplasmic reticulum, golgi 50.96 49.73
TraesCS1D01G269000.1 Wheat plastid 50.14 49.59
EES10737 Sorghum endoplasmic reticulum, golgi, plastid, vacuole 51.52 49.34
EES04288 Sorghum extracellular 48.76 49.17
CDY26931 Canola endoplasmic reticulum, extracellular 45.18 48.24
Os04t0412000-01 Rice plasma membrane 51.79 47.96
HORVU1Hr1G074380.4 Barley golgi 48.21 47.68
CDX88793 Canola extracellular, golgi 44.9 47.66
CDX92349 Canola endoplasmic reticulum, golgi 44.63 47.65
CDY09141 Canola endoplasmic reticulum, golgi 43.25 46.04
VIT_03s0017g02230.t01 Wine grape cytosol 19.83 45.57
Zm00001d003800_P011 Maize extracellular 50.69 44.99
TraesCS1A01G268900.1 Wheat plastid 49.86 44.8
CDX71001 Canola extracellular 26.17 43.78
CDY68104 Canola cytosol 19.56 43.56
CDY60542 Canola cytosol 36.64 40.55
CDY67187 Canola extracellular, golgi 36.36 39.64
CDY43140 Canola extracellular 36.36 39.64
CDX93573 Canola cytosol 34.44 39.31
CDY49935 Canola extracellular 35.81 39.04
CDY43139 Canola extracellular, golgi 35.81 39.04
CDY21213 Canola extracellular 35.54 38.74
CDY67186 Canola extracellular 33.61 38.61
CDY31156 Canola cytosol 34.99 38.6
CDY49934 Canola endoplasmic reticulum, golgi 36.64 37.78
CDY21214 Canola endoplasmic reticulum, golgi, plastid 36.64 37.78
CDY30542 Canola mitochondrion 39.94 37.66
CDX78221 Canola endoplasmic reticulum, extracellular, plasma membrane 12.12 36.97
CDX77121 Canola mitochondrion 21.49 36.45
CDY68922 Canola cytosol, mitochondrion 19.28 33.65
EER89183 Sorghum cytosol 24.24 30.88
CDY32828 Canola nucleus 34.44 29.98
CDX95073 Canola golgi, vacuole 32.78 28.61
CDY35686 Canola endoplasmic reticulum, golgi 44.63 28.57
CDY68993 Canola plasma membrane 12.95 25.13
CDY71255 Canola cytosol 17.63 20.38
CDY41305 Canola cytosol, nucleus, plastid 27.0 18.85
CDY10412 Canola cytosol 27.27 18.79
CDX70335 Canola cytosol 27.27 18.79
CDY22195 Canola cytosol, nucleus, plastid 26.72 18.73
CDX77120 Canola extracellular 10.19 10.31
Protein Annotations
EnsemblPlants:CDX84140EnsemblPlantsGene:GSBRNA2T00141153001Gene3D:3.40.50.1820GO:A0A078D4S3InterPro:AB_hydrolaseInterPro:AB_hydrolase_1
InterPro:IPR029058PANTHER:PTHR10992PANTHER:PTHR10992:SF997PFAM:PF12697ProteinID:CDX84140ProteinID:CDX84140.1
SUPFAM:SSF53474TMHMM:TMhelixUniParc:UPI0004EE47D0MapMan:35.2::
Description
BnaC04g09020D
Coordinates
chrLK031836:+:139943..142085
Molecular Weight (calculated)
40419.2 Da
IEP (calculated)
7.421
GRAVY (calculated)
-0.270
Length
363 amino acids
Sequence
(BLAST)
001: MATGSTDSAT SRSSGVLYKL FVVFSVCIAA STYQALQPPP PKLCGSPGGP SITAPRIKLR DGRHLAYKEH GVPRDEAARK IVFVHGSDSC RHDNAFAALL
101: TPDIKDGLGV YMVSFDRPGY GESDADPNRT PKSLALDIEE LADQLSLGTK FYIIGYSMGG QATWACLKYI PHRLAGAALV TPVVNYWWKS FPSDISNEAY
201: NLQPRNDQWA VRVAHYAPWL THWWNSQKWF LGSSVVTRNL GLLSKSDKEI LFKIGAAGRP HEGEIRQQGT HETVIRDMIV GFGKWEFDPM ELENLFPNKE
301: GSVHLWQGDD DALVPVTLQR YVAKKLPWVH YHEIPGAGHM FPLFPGMVDN IVKTLLTNEE VKN
Best Arabidopsis Sequence Match ( AT2G36290.1 )
(BLAST)
001: MATGSTTDSA RSPSSGVLQK LLLLFSVCIA TSTYKAIQPP PSKLCGSPDG PSITGPRIKL RDGRQLAYKE HGVPRDEATH KIIVVHGSDS CRHDNAFAAL
101: LSPDIKEGLG VYMVSFDRPG YAESDPDPNR TPKSLALDIE ELADQLSLGS KFYVIGYSMG GQATWACLKY IPHRLAGVTL VAPVVNYWWK NFPSEISTEA
201: FNQQGRNDQW AVRVAHYAPW LTHWWNSQSW FPGSSVVARN LGMLSKADKE IMFKLGAARS QHEAQIRQQG THETLHRDMI VGFGTWEFDP MELENLFPNN
301: EGSVHLWQGD DDVLVPVTLQ RYIAKKLPWI HYHEIPGAGH LFPFAPGMVN NIVKTLLTND GVKK
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SJM9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.