Factsheet for PGSC0003DMT400006848

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g009500.2.1	Tomato	plastid	95.41	95.41
PGSC0003DMT400006847	Potato	golgi, mitochondrion, peroxisome, plastid	73.24	72.07
VIT_08s0007g03440.t01	Wine grape	plastid	71.08	69.76
KRH30836	Soybean	mitochondrion, plastid	66.49	65.43
KRH32735	Soybean	endoplasmic reticulum	65.95	65.07
PGSC0003DMT400006849	Potato	mitochondrion, plastid	63.51	61.84
KRH67906	Soybean	golgi, plastid	61.35	61.35
AT1G74300.1	Thale cress	extracellular	55.41	59.25
AT2G36290.1	Thale cress	plastid	58.11	59.07
Bra005286.1-P	Field mustard	plastid	57.57	58.68
CDX75055	Canola	plastid	57.57	58.68
GSMUA_Achr11P...	Banana	mitochondrion	58.65	58.49
CDX84140	Canola	plastid	56.76	57.85
PGSC0003DMT400061630	Potato	endoplasmic reticulum, extracellular, golgi	54.59	56.9
KRG96190	Soybean	extracellular, plasma membrane	43.78	56.25
AT1G74290.1	Thale cress	mitochondrion	55.41	55.26
CDX96530	Canola	endoplasmic reticulum, golgi	54.05	55.1
AT1G74280.1	Thale cress	golgi, mitochondrion	55.14	54.84
Bra015923.1-P	Field mustard	endoplasmic reticulum, golgi	53.78	54.82
HORVU6Hr1G033060.1	Barley	plastid	54.59	54.74
CDX73073	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	53.24	54.72
VIT_03s0017g02230.t01	Wine grape	cytosol	23.24	54.43
PGSC0003DMT400061634	Potato	plastid	59.19	53.41
Os04t0411800-01	Rice	endoplasmic reticulum, golgi	49.46	53.2
EES05176	Sorghum	plastid	52.7	53.13
TraesCS6B01G191000.1	Wheat	plastid	52.7	52.85
Zm00001d016696_P002	Maize	extracellular, plasma membrane	51.89	52.75
PGSC0003DMT400019164	Potato	extracellular, golgi	48.38	52.65
Os02t0532300-02	Rice	plasma membrane	52.43	52.15
TraesCS6D01G152300.1	Wheat	plastid	51.89	51.75
TraesCS6A01G160400.1	Wheat	plastid	51.89	51.75
TraesCS2A01G294400.1	Wheat	plastid	50.0	51.39
TraesCS2B01G310800.1	Wheat	endoplasmic reticulum, golgi, plastid	50.0	51.39
PGSC0003DMT400060120	Potato	extracellular, golgi, vacuole	47.3	51.32
TraesCS2D01G292100.1	Wheat	plastid	49.19	50.56
TraesCS1D01G269000.1	Wheat	plastid	50.0	50.41
EES04288	Sorghum	extracellular	48.38	49.72
EES10737	Sorghum	endoplasmic reticulum, golgi, plastid, vacuole	50.0	48.81
HORVU2Hr1G072830.4	Barley	endoplasmic reticulum, golgi	48.92	48.66
Os04t0412000-01	Rice	plasma membrane	50.81	47.96
HORVU1Hr1G074380.4	Barley	golgi	47.57	47.96
OQU81513	Sorghum	cytosol	26.22	47.32
TraesCS1A01G268900.1	Wheat	plastid	50.27	46.04
Zm00001d003800_P011	Maize	extracellular	49.46	44.74
PGSC0003DMT400030553	Potato	cytosol	34.05	39.01
PGSC0003DMT400030589	Potato	extracellular	37.03	38.7
PGSC0003DMT400018400	Potato	extracellular	36.49	38.14
EER89183	Sorghum	cytosol	26.49	34.39
PGSC0003DMT400004379	Potato	cytosol	27.84	19.47
PGSC0003DMT400070409	Potato	cytosol, peroxisome, plastid	25.14	17.13

Protein Annotations

EnsemblPlants:PGSC0003DMT400006848	EnsemblPlantsGene:PGSC0003DMG401002659	EntrezGene:102583254	Gene3D:3.40.50.1820	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058	PANTHER:PTHR10992	PANTHER:PTHR10992:SF740
PFAM:PF12697	PGSC:PGSC0003DMG401002659	RefSeq:XP_006341136.1	SUPFAM:SSF53474	TMHMM:TMhelix	UniParc:UPI00029530DA
UniProt:M0ZS23	MapMan:35.2	:	:	:	:

Description

Esterase/lipase superfamily protein [Source:PGSC_GENE;Acc:PGSC0003DMG401002659]

Coordinates

chr9:+:3193379..3200094

Molecular Weight (calculated)

41549.0 Da

IEP (calculated)

9.284

GRAVY (calculated)

-0.266

Length

370 amino acids

Sequence
(BLAST)

001: MATKKISAAS ARAHTRKAKQ KSSFPLPSGA FVKIPLVVLI GLLAWGYQAT RPPPPKTCGS PDGPPVTAPR IKLGDGRHLA YKEIGVSRDN AKYKIVYIHG
101: YDGCRHDVPI NILSQDVIES LGVYIVSFDR PGYGESDPNP KRTVKSLAFD IQELADQLGL GSKFYVMGFS MGGQAVWTCL RYIPHRLAGA ALIAPVVNYW
201: WPRLPVNMSQ EAFNLRLPQD KWTLRVAHYL PWLTYWWNTQ KFFPSCSAAG RNPAVFSSKD LELVSKQSSS QDYRAQVRQQ GEYESLHRDL MIGFGTWEFD
301: PMDLENPFPK IEGSIHLWQG DEDRLSPVTL QRYIAEQLPW IQYHEIPGAG HLVPMIDGIG EKIIKTLLTA

Best Arabidopsis Sequence Match ( AT3G48410.1 )
(BLAST)

001: MAGEEIEREK KSAASARTHT RNNTQQSSSS GYLKTLLLVT FVGVLAWVYQ TIQPPPAKIV GSPGGPTVTS PRIKLRDGRH LAYTEFGIPR DEAKFKIINI
101: HGFDSCMRDS HFANFLSPAL VEELRIYIVS FDRPGYGESD PNLNGSPRSI ALDIEELADG LGLGPQFYLF GYSMGGEITW ACLNYIPHRL AGAALVAPAI
201: NYWWRNLPGD LTREAFSLMH PADQWSLRVA HYAPWLTYWW NTQKWFPISN VIAGNPIIFS RQDMEILSKL GFVNPNRAYI RQQGEYVSLH RDLNVAFSSW
301: EFDPLDLQDP FPNNNGSVHV WNGDEDKFVP VKLQRYVASK LPWIRYHEIS GSGHFVPFVE GMTDKIIKSL LVGEEDVSES REASV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMU3]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.